RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 CCDC47Q96A33 483 aaKnown RBP22.84■■□□□ 1.25
MAP1LC3A-202ENST00000374837 C18orf25Q96B23 403 aaPredicted RBP22.84■■□□□ 1.25
MAP1LC3A-202ENST00000374837 FAM212AQ96EL1 285 aa22.84■■□□□ 1.25
MAP1LC3A-202ENST00000374837 PCIF1Q9H4Z3 704 aa22.84■■□□□ 1.25
MAP1LC3A-202ENST00000374837 GOLGA2P5Q9HBQ8 144 aa22.84■■□□□ 1.25
MAP1LC3A-202ENST00000374837 MUC3AQ02505 3323 aa22.83■■□□□ 1.25
MAP1LC3A-202ENST00000374837 PRPF40AO75400 957 aaKnown RBP22.83■■□□□ 1.25
MAP1LC3A-202ENST00000374837 TADA2AO75478 443 aa22.83■■□□□ 1.25
MAP1LC3A-202ENST00000374837 RHOBTB3O94955 611 aa22.83■■□□□ 1.25
MAP1LC3A-202ENST00000374837 CTSAP10619 480 aa22.83■■□□□ 1.25
MAP1LC3A-202ENST00000374837 IGFBP6P24592 240 aaPredicted RBP22.83■■□□□ 1.25
MAP1LC3A-202ENST00000374837 GTF2F1P35269 517 aaKnown RBP eCLIP22.83■■□□□ 1.25
MAP1LC3A-202ENST00000374837 CLCNKBP51801 687 aa22.83■■□□□ 1.25
MAP1LC3A-202ENST00000374837 SMC1AQ14683 1233 aaKnown RBP22.83■■□□□ 1.25
MAP1LC3A-202ENST00000374837 ARMCX5Q6P1M9 558 aa22.83■■□□□ 1.25
MAP1LC3A-202ENST00000374837 RBM23Q86U06 439 aaKnown RBP22.83■■□□□ 1.25
MAP1LC3A-202ENST00000374837 MRPL43Q8N983 215 aaKnown RBP22.83■■□□□ 1.25
MAP1LC3A-202ENST00000374837 AUTS2Q8WXX7 1259 aa22.83■■□□□ 1.25
MAP1LC3A-202ENST00000374837 PPP2R3CQ969Q6 453 aa22.83■■□□□ 1.25
MAP1LC3A-202ENST00000374837 SAAL1Q96ER3 474 aa22.83■■□□□ 1.25
MAP1LC3A-202ENST00000374837 FAM213AQ9BRX8 229 aa22.83■■□□□ 1.25
MAP1LC3A-202ENST00000374837 GPR62Q9BZJ7 368 aa22.83■■□□□ 1.25
MAP1LC3A-202ENST00000374837 IGFLR1Q9H665 355 aa22.83■■□□□ 1.25
MAP1LC3A-202ENST00000374837 TLE6Q9H808 572 aa22.83■■□□□ 1.25
MAP1LC3A-202ENST00000374837 STK39Q9UEW8 545 aa22.83■■□□□ 1.25
MAP1LC3A-202ENST00000374837 ADAM28Q9UKQ2 775 aa22.83■■□□□ 1.25
MAP1LC3A-202ENST00000374837 GOLGA8IPA6NC78 632 aa22.82■■□□□ 1.24
MAP1LC3A-202ENST00000374837 GOLGA8JA6NMD2 632 aa22.82■■□□□ 1.24
MAP1LC3A-202ENST00000374837 KIF4AO95239 1232 aa22.82■■□□□ 1.24
MAP1LC3A-202ENST00000374837 SOD2P04179 222 aa22.82■■□□□ 1.24
MAP1LC3A-202ENST00000374837 NRIP1P48552 1158 aa22.82■■□□□ 1.24
MAP1LC3A-202ENST00000374837 POU5F1Q01860 360 aaKnown RBP22.82■■□□□ 1.24
MAP1LC3A-202ENST00000374837 BMS1Q14692 1282 aaKnown RBP22.82■■□□□ 1.24
MAP1LC3A-202ENST00000374837 KCNB1Q14721 858 aa22.82■■□□□ 1.24
MAP1LC3A-202ENST00000374837 ZBTB6Q15916 424 aa22.82■■□□□ 1.24
MAP1LC3A-202ENST00000374837 UPP1Q16831 310 aa22.82■■□□□ 1.24
MAP1LC3A-202ENST00000374837 FUT10Q6P4F1 479 aa22.82■■□□□ 1.24
MAP1LC3A-202ENST00000374837 DCLRE1AQ6PJP8 1040 aa22.82■■□□□ 1.24
MAP1LC3A-202ENST00000374837 CLEC17AQ6ZS10 378 aa22.82■■□□□ 1.24
MAP1LC3A-202ENST00000374837 CD302Q8IX05 232 aa22.82■■□□□ 1.24
MAP1LC3A-202ENST00000374837 RNF168Q8IYW5 571 aaPredicted RBP22.82■■□□□ 1.24
MAP1LC3A-202ENST00000374837 HASPINQ8TF76 798 aa22.82■■□□□ 1.24
MAP1LC3A-202ENST00000374837 KIF12Q96FN5 646 aa22.82■■□□□ 1.24
MAP1LC3A-202ENST00000374837 DDX27Q96GQ7 796 aaKnown RBP22.82■■□□□ 1.24
MAP1LC3A-202ENST00000374837 UROC1Q96N76 676 aa22.82■■□□□ 1.24
MAP1LC3A-202ENST00000374837 HERC2P3Q9BVR0 1158 aa22.82■■□□□ 1.24
MAP1LC3A-202ENST00000374837 C2orf71A6NGG8 1288 aa22.81■■□□□ 1.24
MAP1LC3A-202ENST00000374837 PER2O15055 1255 aa22.81■■□□□ 1.24
MAP1LC3A-202ENST00000374837 EXTL3O43909 919 aa22.81■■□□□ 1.24
MAP1LC3A-202ENST00000374837 LDHAP00338 332 aaKnown RBP22.81■■□□□ 1.24
MAP1LC3A-202ENST00000374837 UBE2HP62256 183 aa22.81■■□□□ 1.24
MAP1LC3A-202ENST00000374837 COL19A1Q14993 1142 aa22.81■■□□□ 1.24
MAP1LC3A-202ENST00000374837 KNOP1Q1ED39 458 aaKnown RBP22.81■■□□□ 1.24
MAP1LC3A-202ENST00000374837 CD300LGQ6UXG3 332 aa22.81■■□□□ 1.24
MAP1LC3A-202ENST00000374837 TMEM130Q8N3G9 435 aa22.81■■□□□ 1.24
MAP1LC3A-202ENST00000374837 ATXN2LQ8WWM7 1075 aaKnown RBP22.81■■□□□ 1.24
MAP1LC3A-202ENST00000374837 TSPAN18Q96SJ8 248 aa22.81■■□□□ 1.24
MAP1LC3A-202ENST00000374837 AGPAT3Q9NRZ7 376 aa22.81■■□□□ 1.24
MAP1LC3A-202ENST00000374837 TUBGCP4Q9UGJ1 667 aa22.81■■□□□ 1.24
MAP1LC3A-202ENST00000374837 PLXNA4Q9HCM2 1894 aa22.8■■□□□ 1.24
MAP1LC3A-202ENST00000374837 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.8■■□□□ 1.24
MAP1LC3A-202ENST00000374837 KIAA0391O15091 583 aaKnown RBP22.8■■□□□ 1.24
MAP1LC3A-202ENST00000374837 CLIC2O15247 247 aa22.8■■□□□ 1.24
MAP1LC3A-202ENST00000374837 NCK2O43639 380 aa22.8■■□□□ 1.24
MAP1LC3A-202ENST00000374837 KINO60870 393 aaKnown RBP22.8■■□□□ 1.24
MAP1LC3A-202ENST00000374837 B3GAT3O94766 335 aa22.8■■□□□ 1.24
MAP1LC3A-202ENST00000374837 RPL9P32969 192 aaKnown RBP22.8■■□□□ 1.24
MAP1LC3A-202ENST00000374837 CA8P35219 290 aa22.8■■□□□ 1.24
MAP1LC3A-202ENST00000374837 SNRPFP62306 86 aaKnown RBP22.8■■□□□ 1.24
MAP1LC3A-202ENST00000374837 JADE1Q6IE81 842 aa22.8■■□□□ 1.24
MAP1LC3A-202ENST00000374837 ELOA2Q8IYF1 753 aaPredicted RBP22.8■■□□□ 1.24
MAP1LC3A-202ENST00000374837 HLA-CQ95604 372 aa22.8■■□□□ 1.24
MAP1LC3A-202ENST00000374837 ASB7Q9H672 318 aa22.8■■□□□ 1.24
MAP1LC3A-202ENST00000374837 UBQLN1Q9UMX0 589 aaKnown RBP22.8■■□□□ 1.24
MAP1LC3A-202ENST00000374837 COG5Q9UP83 839 aa22.8■■□□□ 1.24
MAP1LC3A-202ENST00000374837 IRAK3Q9Y616 596 aa22.8■■□□□ 1.24
MAP1LC3A-202ENST00000374837 TRANK1O15050 2925 aa22.79■■□□□ 1.24
MAP1LC3A-202ENST00000374837 TMEM189-UBE2V1I3L0A0 370 aa22.79■■□□□ 1.24
MAP1LC3A-202ENST00000374837 PODXLO00592 558 aa22.79■■□□□ 1.24
MAP1LC3A-202ENST00000374837 LILRB3O75022 631 aa22.79■■□□□ 1.24
MAP1LC3A-202ENST00000374837 CYP3A5P20815 502 aa22.79■■□□□ 1.24
MAP1LC3A-202ENST00000374837 ADAM15Q13444 863 aa22.79■■□□□ 1.24
MAP1LC3A-202ENST00000374837 PTPN14Q15678 1187 aa22.79■■□□□ 1.24
MAP1LC3A-202ENST00000374837 DUSP6Q16828 381 aa22.79■■□□□ 1.24
MAP1LC3A-202ENST00000374837 CTC1Q2NKJ3 1217 aa22.79■■□□□ 1.24
MAP1LC3A-202ENST00000374837 KIAA0319Q5VV43 1072 aa22.79■■□□□ 1.24
MAP1LC3A-202ENST00000374837 HS2ST1Q7LGA3 356 aa22.79■■□□□ 1.24
MAP1LC3A-202ENST00000374837 GPD1LQ8N335 351 aa22.79■■□□□ 1.24
MAP1LC3A-202ENST00000374837 C3orf58Q8NDZ4 430 aa22.79■■□□□ 1.24
MAP1LC3A-202ENST00000374837 NOC3LQ8WTT2 800 aaKnown RBP22.79■■□□□ 1.24
MAP1LC3A-202ENST00000374837 ERCC4Q92889 916 aaPredicted RBP22.79■■□□□ 1.24
MAP1LC3A-202ENST00000374837 PABPC5Q96DU9 382 aaKnown RBP22.79■■□□□ 1.24
MAP1LC3A-202ENST00000374837 ASB2Q96Q27 587 aa22.79■■□□□ 1.24
MAP1LC3A-202ENST00000374837 UBE2ZQ9H832 354 aaPredicted RBP22.79■■□□□ 1.24
MAP1LC3A-202ENST00000374837 CHST7Q9NS84 486 aa22.79■■□□□ 1.24
MAP1LC3A-202ENST00000374837 HSPBP1Q9NZL4 362 aa22.79■■□□□ 1.24
MAP1LC3A-202ENST00000374837 PCDHA5Q9Y5H7 936 aa22.79■■□□□ 1.24
MAP1LC3A-202ENST00000374837 MYO7AQ13402 2215 aa22.78■■□□□ 1.24
MAP1LC3A-202ENST00000374837 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.78■■□□□ 1.24
MAP1LC3A-202ENST00000374837 LINC01565O15544 149 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms