RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 LRRIQ4A6NIV6 560 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 MASP2O00187 686 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 KCNQ2O43526 872 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 LRRN2O75325 713 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 PIGNO95427 931 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 SCNN1GP51170 649 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 LIPEQ05469 1076 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 CCINQ13939 588 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 VEPH1Q14D04 833 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 ANO4Q32M45 955 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 CFAP221Q4G0U5 840 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 CLVS2Q5SYC1 327 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 ELMSAN1Q6PJG2 1045 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 RFPL4BQ6ZWI9 263 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 POTEDQ86YR6 584 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 FAM178BQ8IXR5 827 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 ZSCAN1Q8NBB4 408 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 OR6P1Q8NGX9 317 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 BHMT2Q9H2M3 363 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 MRM3Q9HC36 420 aaKnown RBP8.44□□□□□ -1.06
USP48-203ENST00000374732 OLA1Q9NTK5 396 aaKnown RBP8.44□□□□□ -1.06
USP48-203ENST00000374732 ARHGAP28Q9P2N2 729 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 VANGL2Q9ULK5 521 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 PHTF1Q9UMS5 762 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 C15orf38-AP3S2A0A0A6YYH1 394 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 SLC9B1P1A6NJY1 282 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 TISP43B9A030 160 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 B9A039 149 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 GOLGA8SH3BPF8 625 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 M0R3H8 397 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 IRS4O14654 1257 aaPredicted RBP8.44□□□□□ -1.06
USP48-203ENST00000374732 PIAS2O75928 621 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 ALDH1A2O94788 518 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 CLTBP09497 229 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 MYBL1P10243 752 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 VBP1P61758 197 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 C19orf57Q0VDD7 668 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 PLD1Q13393 1074 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 BMPR2Q13873 1038 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 GRM3Q14832 879 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 FSCBQ5H9T9 825 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 FAM102BQ5T8I3 360 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 BZW1Q7L1Q6 419 aaKnown RBP8.44□□□□□ -1.06
USP48-203ENST00000374732 MAP7D3Q8IWC1 876 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 CCNYL1Q8N7R7 359 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 NAXEQ8NCW5 288 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 PGBD1Q96JS3 809 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 PIGSQ96S52 555 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 SIKE1Q9BRV8 207 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 MVB12BQ9H7P6 319 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 PAG1Q9NWQ8 432 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 SLC8A2Q9UPR5 921 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 CEMIPQ8WUJ3 1361 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 ITIH6Q6UXX5 1313 aa8.44□□□□□ -1.06
USP48-203ENST00000374732 VWA3AA6NCI4 1184 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 SPECC1L-ADORA2AF8WAN1 911 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 TLR3O15455 904 aaKnown RBP8.43□□□□□ -1.06
USP48-203ENST00000374732 FOXO3O43524 673 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 BRINP1O60477 761 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 TLR2O60603 784 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 GPR37L1O60883 481 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 NIPSNAP2O75323 286 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 ALOX5P09917 674 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 TFPTP0C1Z6 253 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 LINGO3P0C6S8 592 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 TYRP1P17643 537 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 POLR2EP19388 210 aaKnown RBP8.43□□□□□ -1.06
USP48-203ENST00000374732 ACSL1P33121 698 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 MTIF2P46199 727 aaKnown RBP8.43□□□□□ -1.06
USP48-203ENST00000374732 CD97P48960 835 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 POU3F4P49335 361 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 PLCB3Q01970 1234 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 PPARDQ03181 441 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 ASPHQ12797 758 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 GALEQ14376 348 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 RNASEH2BQ5TBB1 312 aaKnown RBP8.43□□□□□ -1.06
USP48-203ENST00000374732 NDUFAF5Q5TEU4 345 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 CEP85Q6P2H3 762 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 HEATR4Q86WZ0 1026 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 CCDC13Q8IYE1 715 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 HACE1Q8IYU2 909 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 NATD1Q8N6N6 113 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 CCDC112Q8NEF3 446 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 URGCPQ8TCY9 931 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 HNRNPLLQ8WVV9 542 aaKnown RBP8.43□□□□□ -1.06
USP48-203ENST00000374732 SLF1Q9BQI6 1058 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 SLITRK6Q9H5Y7 841 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 COQ3Q9NZJ6 369 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 AFF4Q9UHB7 1163 aaKnown RBP8.43□□□□□ -1.06
USP48-203ENST00000374732 ADAMTS1Q9UHI8 967 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 MED16Q9Y2X0 877 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 AP1M2Q9Y6Q5 423 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 SNTNA6NMZ2 147 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 FSCN2O14926 492 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 POLR2DO15514 142 aaKnown RBP8.43□□□□□ -1.06
USP48-203ENST00000374732 RRP8O43159 456 aaKnown RBP8.43□□□□□ -1.06
USP48-203ENST00000374732 HOXB7P09629 217 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 ALADP13716 330 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 SMARCB1Q12824 385 aa8.43□□□□□ -1.06
USP48-203ENST00000374732 AP3B2Q13367 1082 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms