RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 CDCA5Q96FF9 252 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 DBR1Q9UK59 544 aaKnown RBP11.55□□□□□ -0.56
CXCL12-203ENST00000374429 THSD7AQ9UPZ6 1657 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 ANKRD31Q8N7Z5 1873 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 SFNP31947 248 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 RGS7P49802 495 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 LIG3P49916 1009 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 UAP1Q16222 522 aaPredicted RBP11.55□□□□□ -0.56
CXCL12-203ENST00000374429 SGO2Q562F6 1265 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 XKR3Q5GH77 459 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 CCDC137Q6PK04 289 aaKnown RBP11.55□□□□□ -0.56
CXCL12-203ENST00000374429 SYCE1Q8N0S2 351 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 FBXO25Q8TCJ0 367 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 PPM1EQ8WY54 764 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 ZNF516Q92618 1163 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 RPGRIP1Q96KN7 1286 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 CAPS2Q9BXY5 557 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 NRBP2Q9NSY0 501 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 PRRC2BQ5JSZ5 2229 aaKnown RBP11.55□□□□□ -0.56
CXCL12-203ENST00000374429 ERLIN2O94905 339 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 OATP04181 439 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 SUPT20HL2P0C7V6 817 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 MAGEA9P43362 315 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 NCOA4Q13772 614 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 C10orf76Q5T2E6 689 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 EFCAB12Q6NXP0 572 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 MICALL1Q8N3F8 863 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 UBA3Q8TBC4 463 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 KLK14Q9P0G3 267 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 SUCLA2Q9P2R7 463 aaPredicted RBP11.55□□□□□ -0.56
CXCL12-203ENST00000374429 POLIQ9UNA4 740 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 STK24Q9Y6E0 443 aa11.55□□□□□ -0.56
CXCL12-203ENST00000374429 ANKRD62A6NC57 917 aa11.54□□□□□ -0.56
CXCL12-203ENST00000374429 AGPSO00116 658 aa11.54□□□□□ -0.56
CXCL12-203ENST00000374429 CXCL8P10145 99 aa11.54□□□□□ -0.56
CXCL12-203ENST00000374429 ATP4AP20648 1035 aa11.54□□□□□ -0.56
CXCL12-203ENST00000374429 GTF2H1P32780 548 aa11.54□□□□□ -0.56
CXCL12-203ENST00000374429 IREB2P48200 963 aaKnown RBP11.54□□□□□ -0.56
CXCL12-203ENST00000374429 LACTBP83111 547 aaPredicted RBP11.54□□□□□ -0.56
CXCL12-203ENST00000374429 CYP24A1Q07973 514 aa11.54□□□□□ -0.56
CXCL12-203ENST00000374429 KIZQ2M2Z5 673 aa11.54□□□□□ -0.56
CXCL12-203ENST00000374429 INPP4AQ96PE3 977 aaPredicted RBP11.54□□□□□ -0.56
CXCL12-203ENST00000374429 MMP19Q99542 508 aa11.54□□□□□ -0.56
CXCL12-203ENST00000374429 LAMB1P07942 1786 aa11.54□□□□□ -0.56
CXCL12-203ENST00000374429 EDN1P05305 212 aa11.54□□□□□ -0.56
CXCL12-203ENST00000374429 MYZAPP0CAP1 466 aa11.54□□□□□ -0.56
CXCL12-203ENST00000374429 ALDH5A1P51649 535 aaPredicted RBP11.54□□□□□ -0.56
CXCL12-203ENST00000374429 RPL7AP62424 266 aaKnown RBP11.54□□□□□ -0.56
CXCL12-203ENST00000374429 C1orf220Q5T0J3 134 aa11.54□□□□□ -0.56
CXCL12-203ENST00000374429 TDRD10Q5VZ19 366 aaKnown RBP11.54□□□□□ -0.56
CXCL12-203ENST00000374429 C1orf131Q8NDD1 294 aaKnown RBP11.54□□□□□ -0.56
CXCL12-203ENST00000374429 MCPH1Q8NEM0 835 aa11.54□□□□□ -0.56
CXCL12-203ENST00000374429 IQCDQ96DY2 449 aa11.54□□□□□ -0.56
CXCL12-203ENST00000374429 RNPEPQ9H4A4 650 aa11.54□□□□□ -0.56
CXCL12-203ENST00000374429 TJP2Q9UDY2 1190 aa11.54□□□□□ -0.56
CXCL12-203ENST00000374429 SOWAHBA6NEL2 793 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 TCF4P15884 667 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 ADCYAP1R1P41586 468 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 NRLP54845 237 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 MAGOHP61326 146 aaKnown RBP11.53□□□□□ -0.56
CXCL12-203ENST00000374429 NOP14P78316 857 aaKnown RBP11.53□□□□□ -0.56
CXCL12-203ENST00000374429 WDR93Q6P2C0 686 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 USP37Q86T82 979 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 EDEM3Q9BZQ6 932 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 AGTPBP1Q9UPW5 1226 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 ZNF148Q9UQR1 794 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 NUB1Q9Y5A7 615 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 LRRD1A4D1F6 860 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 TLR3O15455 904 aaKnown RBP11.53□□□□□ -0.56
CXCL12-203ENST00000374429 OPA1O60313 960 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 ATP11AP98196 1134 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 IFRD2Q12894 506 aaPredicted RBP11.53□□□□□ -0.56
CXCL12-203ENST00000374429 PLCB4Q15147 1175 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 MAPK6Q16659 721 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 DCAF12L1Q5VU92 463 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 FKBP1CQ5VVH2 108 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 EEF1DP3Q658K8 133 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 C9orf72Q96LT7 481 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 IWS1Q96ST2 819 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 FMO2Q99518 471 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 GPR88Q9GZN0 384 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 CACNG4Q9UBN1 327 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 TSKSQ9UJT2 592 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 PCDHGC5Q9Y5F6 944 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 SNCAIPQ9Y6H5 919 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 A0A087WZ62 844 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 SHBGP04278 402 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 ZSCAN5DPP0CG00 497 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 YY1P25490 414 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 ACTN2P35609 894 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 HSD17B3P37058 310 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 ZNF131P52739 623 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 FMO1Q01740 532 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 ZKSCAN8Q15776 578 aaPredicted RBP11.53□□□□□ -0.56
CXCL12-203ENST00000374429 TTMPQ5BVD1 217 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 MMGT1Q8N4V1 131 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 RBBP8NLQ8NC74 664 aaPredicted RBP11.53□□□□□ -0.56
CXCL12-203ENST00000374429 AFG1LQ8WV93 481 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 VTI1AQ96AJ9 217 aa11.53□□□□□ -0.56
CXCL12-203ENST00000374429 BORCS6Q96GS4 357 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms