RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 SPATA20Q8TB22 786 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 KIF12Q96FN5 646 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 PAAF1Q9BRP4 392 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 STK39Q9UEW8 545 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 TRIP11Q15643 1979 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 GOLGA8IPA6NC78 632 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 GOLGA8JA6NMD2 632 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 TULP1O00294 542 aaPredicted RBP17.37■□□□□ 0.37
HDHD3-202ENST00000374180 CLIC2O15247 247 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 TADA2AO75478 443 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 IRS1P35568 1242 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 VPS52Q8N1B4 723 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 ZSWIM2Q8NEG5 633 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 GOLGA5Q8TBA6 731 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 C18orf25Q96B23 403 aaPredicted RBP17.37■□□□□ 0.37
HDHD3-202ENST00000374180 UROC1Q96N76 676 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 TSPAN18Q96SJ8 248 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 TCF25Q9BQ70 676 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 ASB7Q9H672 318 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 GOLGA2P5Q9HBQ8 144 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 NGRNQ9NPE2 291 aaKnown RBP17.37■□□□□ 0.37
HDHD3-202ENST00000374180 ENTPD7Q9NQZ7 604 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 LMBRD1Q9NUN5 540 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 MARCH5Q9NX47 278 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 HSPBP1Q9NZL4 362 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 MAPK8IP1Q9UQF2 711 aa17.37■□□□□ 0.37
HDHD3-202ENST00000374180 COL4A4P53420 1690 aaPredicted RBP17.36■□□□□ 0.37
HDHD3-202ENST00000374180 CITO14578 2027 aa17.36■□□□□ 0.37
HDHD3-202ENST00000374180 F8W810 466 aa17.36■□□□□ 0.37
HDHD3-202ENST00000374180 CLCNKBP51801 687 aa17.36■□□□□ 0.37
HDHD3-202ENST00000374180 SOX4Q06945 474 aaPredicted RBP17.36■□□□□ 0.37
HDHD3-202ENST00000374180 DCLRE1AQ6PJP8 1040 aa17.36■□□□□ 0.37
HDHD3-202ENST00000374180 GPD1LQ8N335 351 aa17.36■□□□□ 0.37
HDHD3-202ENST00000374180 DDX27Q96GQ7 796 aaKnown RBP17.36■□□□□ 0.37
HDHD3-202ENST00000374180 NSUN3Q9H649 340 aaKnown RBP17.36■□□□□ 0.37
HDHD3-202ENST00000374180 KIAA1586Q9HCI6 787 aa17.36■□□□□ 0.37
HDHD3-202ENST00000374180 ADAM28Q9UKQ2 775 aa17.36■□□□□ 0.37
HDHD3-202ENST00000374180 PDXKO00764 312 aa17.35■□□□□ 0.37
HDHD3-202ENST00000374180 XPOTO43592 962 aaKnown RBP17.35■□□□□ 0.37
HDHD3-202ENST00000374180 B3GAT3O94766 335 aa17.35■□□□□ 0.37
HDHD3-202ENST00000374180 IL18RAPO95256 599 aa17.35■□□□□ 0.37
HDHD3-202ENST00000374180 CXCL14O95715 111 aa17.35■□□□□ 0.37
HDHD3-202ENST00000374180 RPL9P32969 192 aaKnown RBP17.35■□□□□ 0.37
HDHD3-202ENST00000374180 CYP2J2P51589 502 aa17.35■□□□□ 0.37
HDHD3-202ENST00000374180 SKIV2LQ15477 1246 aaKnown RBP17.35■□□□□ 0.37
HDHD3-202ENST00000374180 ZBTB6Q15916 424 aa17.35■□□□□ 0.37
HDHD3-202ENST00000374180 UPP1Q16831 310 aa17.35■□□□□ 0.37
HDHD3-202ENST00000374180 PLPP4Q5VZY2 271 aa17.35■□□□□ 0.37
HDHD3-202ENST00000374180 JADE1Q6IE81 842 aa17.35■□□□□ 0.37
HDHD3-202ENST00000374180 GUF1Q8N442 669 aaKnown RBP17.35■□□□□ 0.37
HDHD3-202ENST00000374180 PPP2R3CQ969Q6 453 aa17.35■□□□□ 0.37
HDHD3-202ENST00000374180 VN1R3Q9BXE9 311 aa17.35■□□□□ 0.37
HDHD3-202ENST00000374180 GTPBP4Q9BZE4 634 aaKnown RBP17.35■□□□□ 0.37
HDHD3-202ENST00000374180 KCTD10Q9H3F6 313 aa17.35■□□□□ 0.37
HDHD3-202ENST00000374180 RBAKQ9NYW8 714 aaPredicted RBP17.35■□□□□ 0.37
HDHD3-202ENST00000374180 UBQLN1Q9UMX0 589 aaKnown RBP17.35■□□□□ 0.37
HDHD3-202ENST00000374180 PCDHGC5Q9Y5F6 944 aa17.35■□□□□ 0.37
HDHD3-202ENST00000374180 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.35■□□□□ 0.37
HDHD3-202ENST00000374180 ZNF233A6NK53 670 aa17.34■□□□□ 0.37
HDHD3-202ENST00000374180 FSCN2O14926 492 aa17.34■□□□□ 0.37
HDHD3-202ENST00000374180 KIF4AO95239 1232 aa17.34■□□□□ 0.37
HDHD3-202ENST00000374180 CA8P35219 290 aa17.34■□□□□ 0.37
HDHD3-202ENST00000374180 TMEM132DQ14C87 1099 aa17.34■□□□□ 0.37
HDHD3-202ENST00000374180 CAMK4Q16566 473 aa17.34■□□□□ 0.37
HDHD3-202ENST00000374180 TCEAL5Q5H9L2 206 aa17.34■□□□□ 0.37
HDHD3-202ENST00000374180 ZNF658Q5TYW1 1059 aaPredicted RBP17.34■□□□□ 0.37
HDHD3-202ENST00000374180 FUT10Q6P4F1 479 aa17.34■□□□□ 0.37
HDHD3-202ENST00000374180 BRSK2Q8IWQ3 736 aa17.34■□□□□ 0.37
HDHD3-202ENST00000374180 C12orf56Q8IXR9 622 aa17.34■□□□□ 0.37
HDHD3-202ENST00000374180 SMYD4Q8IYR2 804 aaPredicted RBP17.34■□□□□ 0.37
HDHD3-202ENST00000374180 MRPL43Q8N983 215 aaKnown RBP17.34■□□□□ 0.37
HDHD3-202ENST00000374180 XXYLT1Q8NBI6 393 aa17.34■□□□□ 0.37
HDHD3-202ENST00000374180 RDH13Q8NBN7 331 aa17.34■□□□□ 0.37
HDHD3-202ENST00000374180 HASPINQ8TF76 798 aa17.34■□□□□ 0.37
HDHD3-202ENST00000374180 PLXNA4Q9HCM2 1894 aa17.34■□□□□ 0.37
HDHD3-202ENST00000374180 TUBGCP4Q9UGJ1 667 aa17.34■□□□□ 0.37
HDHD3-202ENST00000374180 DERAQ9Y315 318 aa17.34■□□□□ 0.37
HDHD3-202ENST00000374180 PODXLO00592 558 aa17.33■□□□□ 0.37
HDHD3-202ENST00000374180 SOD2P04179 222 aa17.33■□□□□ 0.37
HDHD3-202ENST00000374180 NFICP08651 508 aa17.33■□□□□ 0.37
HDHD3-202ENST00000374180 CTSAP10619 480 aa17.33■□□□□ 0.37
HDHD3-202ENST00000374180 CYP3A5P20815 502 aa17.33■□□□□ 0.37
HDHD3-202ENST00000374180 SMC1AQ14683 1233 aaKnown RBP17.33■□□□□ 0.37
HDHD3-202ENST00000374180 ISM2Q6H9L7 571 aa17.33■□□□□ 0.37
HDHD3-202ENST00000374180 TAS1R1Q7RTX1 841 aa17.33■□□□□ 0.37
HDHD3-202ENST00000374180 CBWD2Q8IUF1 395 aa17.33■□□□□ 0.37
HDHD3-202ENST00000374180 BEST2Q8NFU1 509 aa17.33■□□□□ 0.37
HDHD3-202ENST00000374180 FBXL18Q96ME1 805 aa17.33■□□□□ 0.37
HDHD3-202ENST00000374180 GPR62Q9BZJ7 368 aa17.33■□□□□ 0.37
HDHD3-202ENST00000374180 ZBP1Q9H171 429 aa17.33■□□□□ 0.37
HDHD3-202ENST00000374180 TLE6Q9H808 572 aa17.33■□□□□ 0.37
HDHD3-202ENST00000374180 C2CD2Q9Y426 696 aa17.33■□□□□ 0.37
HDHD3-202ENST00000374180 SF3B1O75533 1304 aaKnown RBP eCLIP17.33■□□□□ 0.36
HDHD3-202ENST00000374180 TMEM189-UBE2V1I3L0A0 370 aa17.32■□□□□ 0.36
HDHD3-202ENST00000374180 CALUO43852 315 aaPredicted RBP17.32■□□□□ 0.36
HDHD3-202ENST00000374180 EXOC3O60645 756 aa17.32■□□□□ 0.36
HDHD3-202ENST00000374180 SLC34A2O95436 690 aa17.32■□□□□ 0.36
HDHD3-202ENST00000374180 EFEMP2O95967 443 aa17.32■□□□□ 0.36
HDHD3-202ENST00000374180 PRCPP42785 496 aa17.32■□□□□ 0.36
HDHD3-202ENST00000374180 SNRNP35Q16560 246 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms