RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 ASIC4Q96FT7 647 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 RBM41Q96IZ5 413 aaKnown RBP15.11■□□□□ 0.01
TRAF1-201ENST00000373887 STOML1Q9UBI4 398 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 STK36Q9NRP7 1315 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 LRRC53A6NM62 1247 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 MFAP3LO75121 409 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 MYO1DO94832 1006 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 ZBED8Q8IZ13 594 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 TEX9Q8N6V9 391 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 FAM151AQ8WW52 585 aa15.11■□□□□ 0.01
TRAF1-201ENST00000373887 MAP3K20Q9NYL2 800 aaKnown RBP15.11■□□□□ 0.01
TRAF1-201ENST00000373887 ALDH18A1P54886 795 aaKnown RBP15.1■□□□□ 0.01
TRAF1-201ENST00000373887 PDIA2Q13087 525 aaKnown RBP15.1■□□□□ 0.01
TRAF1-201ENST00000373887 GPS1Q13098 491 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 ADCK1Q86TW2 530 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 TMEM35BQ8NCS4 154 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 SEPT5Q99719 369 aaPredicted RBP15.1■□□□□ 0.01
TRAF1-201ENST00000373887 NUP85Q9BW27 656 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 ASCC2Q9H1I8 757 aaPredicted RBP15.1■□□□□ 0.01
TRAF1-201ENST00000373887 KIAA1586Q9HCI6 787 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 APOA1P02647 267 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 PDGFRBP09619 1106 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 BTBD8Q5XKL5 378 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 HAUS6Q7Z4H7 955 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 NUDT12Q9BQG2 462 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 PTPRMP28827 1452 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 USP31Q70CQ4 1352 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 DIP2AQ14689 1571 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 MAGEA9P43362 315 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 TBL3Q12788 808 aaKnown RBP15.1■□□□□ 0.01
TRAF1-201ENST00000373887 VEPH1Q14D04 833 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 KRT39Q6A163 491 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 EMBQ6PCB8 327 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 USP6NLQ92738 828 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 SENP1Q9P0U3 644 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 SYNGAP1Q96PV0 1343 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 RPS6KA5O75582 802 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 ATN1P54259 1190 aaPredicted RBP15.1■□□□□ 0.01
TRAF1-201ENST00000373887 PGBD3Q8N328 593 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 PNPLA7Q6ZV29 1317 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 EMSYQ7Z589 1322 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 ESYT3A0FGR9 886 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 H0YC42 278 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 ATP5HO75947 161 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 EPHX2P34913 555 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 MMS22LQ6ZRQ5 1243 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 PHF21AQ96BD5 680 aa15.1■□□□□ 0.01
TRAF1-201ENST00000373887 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.1■□□□□ 0.01
TRAF1-201ENST00000373887 MEFVO15553 781 aaPredicted RBP15.09■□□□□ 0.01
TRAF1-201ENST00000373887 ATXN3P54252 364 aaPredicted RBP15.09■□□□□ 0.01
TRAF1-201ENST00000373887 INTS5Q6P9B9 1019 aaKnown RBP15.09■□□□□ 0.01
TRAF1-201ENST00000373887 ANKRD13AQ8IZ07 590 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 NUP93Q8N1F7 819 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 PLA2G12BQ9BX93 195 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 POLLQ9UGP5 575 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 SPDYE5A6NIY4 337 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 HSPA1AP0DMV8 641 aaKnown RBP15.09■□□□□ 0.01
TRAF1-201ENST00000373887 HSPA1BP0DMV9 641 aaKnown RBP15.09■□□□□ 0.01
TRAF1-201ENST00000373887 DYNC1I2Q13409 638 aaKnown RBP15.09■□□□□ 0.01
TRAF1-201ENST00000373887 NBPF20Q3BBV1 942 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 SPDYE7PQ495Y7 208 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 FAM102AQ5T9C2 384 aaPredicted RBP15.09■□□□□ 0.01
TRAF1-201ENST00000373887 HHIPL2Q6UWX4 724 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 UNC45AQ9H3U1 944 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 ETNK1Q9HBU6 452 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 AIPL1Q9NZN9 384 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 AGAP1Q9UPQ3 857 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 NBNO60934 754 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 NR3C2P08235 984 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 PRAMEP78395 509 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 ALX1Q15699 326 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 ANKRD40Q6AI12 368 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 C11orf74Q86VG3 221 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 PARP9Q8IXQ6 854 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 VCPKMTQ9H867 229 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 TMEM161AQ9NX61 479 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 MYO1CO00159 1063 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 GFAPP14136 432 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 OR1G1P47890 313 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 RGS7P49802 495 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 FCGRTP55899 365 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 PPP2R2AP63151 447 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 DDX42Q86XP3 938 aaKnown RBP eCLIP15.09■□□□□ 0.01
TRAF1-201ENST00000373887 LPAR1Q92633 364 aa15.09■□□□□ 0.01
TRAF1-201ENST00000373887 SMAD5Q99717 465 aaKnown RBP15.09■□□□□ 0.01
TRAF1-201ENST00000373887 ENTPD3O75355 529 aa15.08■□□□□ 0.01
TRAF1-201ENST00000373887 PGK2P07205 417 aa15.08■□□□□ 0.01
TRAF1-201ENST00000373887 SDC4P31431 198 aa15.08■□□□□ 0.01
TRAF1-201ENST00000373887 HEATR6Q6AI08 1181 aaKnown RBP15.08■□□□□ 0.01
TRAF1-201ENST00000373887 NFRKBQ6P4R8 1299 aa15.08■□□□□ 0.01
TRAF1-201ENST00000373887 TTC23LQ6PF05 361 aa15.08■□□□□ 0.01
TRAF1-201ENST00000373887 OR6P1Q8NGX9 317 aa15.08■□□□□ 0.01
TRAF1-201ENST00000373887 PRMT6Q96LA8 375 aaPredicted RBP15.08■□□□□ 0.01
TRAF1-201ENST00000373887 SNX9Q9Y5X1 595 aa15.08■□□□□ 0.01
TRAF1-201ENST00000373887 NEXMIFQ5QGS0 1516 aa15.08■□□□□ 0.01
TRAF1-201ENST00000373887 GYS1P13807 737 aa15.08■□□□□ 0
TRAF1-201ENST00000373887 ROR1Q01973 937 aa15.08■□□□□ 0
TRAF1-201ENST00000373887 DRAP1Q14919 205 aaPredicted RBP15.08■□□□□ 0
TRAF1-201ENST00000373887 ANGPT1Q15389 498 aa15.08■□□□□ 0
TRAF1-201ENST00000373887 LRRC36Q1X8D7 754 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms