RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 EXT2Q93063 718 aa14.99□□□□□ -0.01
LMX1B-202ENST00000373474 ASPSCR1Q9BZE9 553 aa14.99□□□□□ -0.01
LMX1B-202ENST00000373474 KIF20BQ96Q89 1820 aa14.99□□□□□ -0.01
LMX1B-202ENST00000373474 MYBP10242 640 aa14.99□□□□□ -0.01
LMX1B-202ENST00000373474 CIITAP33076 1130 aa14.99□□□□□ -0.01
LMX1B-202ENST00000373474 MRPS35P82673 323 aaKnown RBP14.99□□□□□ -0.01
LMX1B-202ENST00000373474 MED21Q13503 144 aa14.99□□□□□ -0.01
LMX1B-202ENST00000373474 HIF1AQ16665 826 aa14.99□□□□□ -0.01
LMX1B-202ENST00000373474 RAPGEF5Q92565 580 aa14.99□□□□□ -0.01
LMX1B-202ENST00000373474 TRABDQ9H4I3 376 aa14.99□□□□□ -0.01
LMX1B-202ENST00000373474 RGL1Q9NZL6 768 aa14.99□□□□□ -0.01
LMX1B-202ENST00000373474 SMG5Q9UPR3 1016 aaKnown RBP14.99□□□□□ -0.01
LMX1B-202ENST00000373474 DIP2AQ14689 1571 aa14.99□□□□□ -0.01
LMX1B-202ENST00000373474 PI4K2BG5E9Z4 385 aa14.99□□□□□ -0.01
LMX1B-202ENST00000373474 IL10P22301 178 aa14.99□□□□□ -0.01
LMX1B-202ENST00000373474 FXR2P51116 673 aaKnown RBP eCLIP14.99□□□□□ -0.01
LMX1B-202ENST00000373474 TSTA3Q13630 321 aaPredicted RBP14.99□□□□□ -0.01
LMX1B-202ENST00000373474 AGGF1Q8N302 714 aaeCLIP14.99□□□□□ -0.01
LMX1B-202ENST00000373474 TOPORSQ9NS56 1045 aaPredicted RBP14.99□□□□□ -0.01
LMX1B-202ENST00000373474 CDV3Q9UKY7 258 aaKnown RBP14.99□□□□□ -0.01
LMX1B-202ENST00000373474 C21orf2O43822 256 aa14.99□□□□□ -0.01
LMX1B-202ENST00000373474 PPARGP37231 505 aaPredicted RBP14.99□□□□□ -0.01
LMX1B-202ENST00000373474 ISCUQ9H1K1 167 aa14.99□□□□□ -0.01
LMX1B-202ENST00000373474 FHOD1Q9Y613 1164 aa14.99□□□□□ -0.01
LMX1B-202ENST00000373474 S100A5P33763 92 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 SEPT12Q8IYM1 358 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 RMDN2Q96LZ7 410 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 KIF9Q9HAQ2 790 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 GTSE1Q9NYZ3 720 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 CEMIPQ8WUJ3 1361 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 APOL1O14791 398 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 WDR47O94967 919 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 CCND1P24385 295 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 RHPN2Q8IUC4 686 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 ZIM3Q96PE6 472 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 FSD1LQ9BXM9 530 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 HERC5Q9UII4 1024 aaKnown RBP14.98□□□□□ -0.01
LMX1B-202ENST00000373474 LRFN2Q9ULH4 789 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 EIF3DO15371 548 aaKnown RBP eCLIP14.98□□□□□ -0.01
LMX1B-202ENST00000373474 GRIN1Q05586 938 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 PATL1Q86TB9 770 aaKnown RBP14.98□□□□□ -0.01
LMX1B-202ENST00000373474 TEX2Q8IWB9 1127 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 USP38Q8NB14 1042 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 SLC26A7Q8TE54 656 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 L2HGDHQ9H9P8 463 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 EPHB1P54762 984 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 BCAR1P56945 870 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 SF3B3Q15393 1217 aaKnown RBP14.98□□□□□ -0.01
LMX1B-202ENST00000373474 DAB2IPQ5VWQ8 1189 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 C1orf228Q6PIY5 440 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 XPO6Q96QU8 1125 aaKnown RBP14.98□□□□□ -0.01
LMX1B-202ENST00000373474 SMARCAL1Q9NZC9 954 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 CFAP69A5D8W1 941 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 ADCY3O60266 1144 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 PDIA6Q15084 440 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 SEC16BQ96JE7 1060 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 CNBD2Q96M20 576 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 ERGIC2Q96RQ1 377 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 SLC13A1Q9BZW2 595 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 DONSONQ9NYP3 566 aa14.98□□□□□ -0.01
LMX1B-202ENST00000373474 ZNF189O75820 626 aaPredicted RBP14.97□□□□□ -0.01
LMX1B-202ENST00000373474 XPAP23025 273 aaPredicted RBP14.97□□□□□ -0.01
LMX1B-202ENST00000373474 ARPP19P56211 112 aa14.97□□□□□ -0.01
LMX1B-202ENST00000373474 PTPAQ15257 358 aa14.97□□□□□ -0.01
LMX1B-202ENST00000373474 LDHDQ86WU2 507 aa14.97□□□□□ -0.01
LMX1B-202ENST00000373474 HORMAD1Q86X24 394 aa14.97□□□□□ -0.01
LMX1B-202ENST00000373474 DAGLBQ8NCG7 672 aa14.97□□□□□ -0.01
LMX1B-202ENST00000373474 ZNF212Q9UDV6 495 aa14.97□□□□□ -0.01
LMX1B-202ENST00000373474 PCDHA10Q9Y5I2 948 aa14.97□□□□□ -0.01
LMX1B-202ENST00000373474 DIAPH2O60879 1101 aa14.97□□□□□ -0.01
LMX1B-202ENST00000373474 HUS1O60921 280 aa14.97□□□□□ -0.01
LMX1B-202ENST00000373474 TMEM253P0C7T8 217 aa14.97□□□□□ -0.01
LMX1B-202ENST00000373474 FDX1P10109 184 aa14.97□□□□□ -0.01
LMX1B-202ENST00000373474 SSTR3P32745 418 aaPredicted RBP14.97□□□□□ -0.01
LMX1B-202ENST00000373474 HIC1Q14526 733 aa14.97□□□□□ -0.01
LMX1B-202ENST00000373474 LONRF1Q17RB8 773 aa14.97□□□□□ -0.01
LMX1B-202ENST00000373474 P3H1Q32P28 736 aa14.97□□□□□ -0.01
LMX1B-202ENST00000373474 FAM102AQ5T9C2 384 aaPredicted RBP14.97□□□□□ -0.01
LMX1B-202ENST00000373474 THEM5Q8N1Q8 247 aa14.97□□□□□ -0.01
LMX1B-202ENST00000373474 SPDYE1Q8NFV5 336 aaPredicted RBP14.97□□□□□ -0.01
LMX1B-202ENST00000373474 FAM49AQ9H0Q0 323 aaPredicted RBP14.97□□□□□ -0.01
LMX1B-202ENST00000373474 ANKMY2Q8IV38 441 aa14.97□□□□□ -0.01
LMX1B-202ENST00000373474 GID8Q9NWU2 228 aa14.97□□□□□ -0.01
LMX1B-202ENST00000373474 USP15Q9Y4E8 981 aaPredicted RBP14.97□□□□□ -0.01
LMX1B-202ENST00000373474 KCNA3P22001 575 aa14.97□□□□□ -0.01
LMX1B-202ENST00000373474 LSP1P33241 339 aa14.97□□□□□ -0.01
LMX1B-202ENST00000373474 EIF3EP60228 445 aaKnown RBP14.97□□□□□ -0.01
LMX1B-202ENST00000373474 KYAT1Q16773 422 aa14.97□□□□□ -0.01
LMX1B-202ENST00000373474 ZNF710Q8N1W2 664 aa14.97□□□□□ -0.01
LMX1B-202ENST00000373474 NOA1Q8NC60 698 aaKnown RBP14.97□□□□□ -0.01
LMX1B-202ENST00000373474 RIN2Q8WYP3 895 aaPredicted RBP14.97□□□□□ -0.01
LMX1B-202ENST00000373474 PNMA3Q9UL41 463 aa14.97□□□□□ -0.01
LMX1B-202ENST00000373474 ITPRIPL1Q6GPH6 555 aa14.96□□□□□ -0.01
LMX1B-202ENST00000373474 PBXIP1Q96AQ6 731 aa14.96□□□□□ -0.01
LMX1B-202ENST00000373474 SENP7Q9BQF6 1050 aa14.96□□□□□ -0.01
LMX1B-202ENST00000373474 WWP1Q9H0M0 922 aa14.96□□□□□ -0.01
LMX1B-202ENST00000373474 TRIM45Q9H8W5 580 aaPredicted RBP14.96□□□□□ -0.01
LMX1B-202ENST00000373474 FAM217BQ9NTX9 383 aaPredicted RBP14.96□□□□□ -0.01
LMX1B-202ENST00000373474 STAP1Q9ULZ2 295 aa14.96□□□□□ -0.01
LMX1B-202ENST00000373474 DAGLAQ9Y4D2 1042 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms