RNA–Protein interactions for RNA: ENST00000373298.6

ITM2A-201, Transcript of integral membrane protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2A, Length 1,641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-201ENST00000373298 SCN1AP35498 2009 aa10.36□□□□□ -0.75
ITM2A-201ENST00000373298 LACTBL1A8MY62 500 aa10.36□□□□□ -0.75
ITM2A-201ENST00000373298 AKAP3O75969 853 aa10.36□□□□□ -0.75
ITM2A-201ENST00000373298 GARTP22102 1010 aa10.36□□□□□ -0.75
ITM2A-201ENST00000373298 SCP2P22307 547 aa10.36□□□□□ -0.75
ITM2A-201ENST00000373298 NLRP12P59046 1061 aa10.36□□□□□ -0.75
ITM2A-201ENST00000373298 ZSCAN23Q3MJ62 389 aa10.36□□□□□ -0.75
ITM2A-201ENST00000373298 LMBRD2Q68DH5 695 aaPredicted RBP10.36□□□□□ -0.75
ITM2A-201ENST00000373298 TTI2Q6NXR4 508 aa10.36□□□□□ -0.75
ITM2A-201ENST00000373298 TMEM173Q86WV6 379 aaPredicted RBP10.36□□□□□ -0.75
ITM2A-201ENST00000373298 EFCAB13Q8IY85 973 aa10.36□□□□□ -0.75
ITM2A-201ENST00000373298 P2RX5Q93086 422 aa10.36□□□□□ -0.75
ITM2A-201ENST00000373298 FBXL18Q96ME1 805 aa10.36□□□□□ -0.75
ITM2A-201ENST00000373298 ACAP3Q96P50 834 aa10.36□□□□□ -0.75
ITM2A-201ENST00000373298 RAD9AQ99638 391 aa10.36□□□□□ -0.75
ITM2A-201ENST00000373298 NKX2-4Q9H2Z4 354 aa10.36□□□□□ -0.75
ITM2A-201ENST00000373298 CWH43Q9H720 699 aa10.36□□□□□ -0.75
ITM2A-201ENST00000373298 MTUS1Q9ULD2 1270 aa10.36□□□□□ -0.75
ITM2A-201ENST00000373298 BRWD1Q9NSI6 2320 aa10.36□□□□□ -0.75
ITM2A-201ENST00000373298 VCANP13611 3396 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 PRRC2BQ5JSZ5 2229 aaKnown RBP10.35□□□□□ -0.75
ITM2A-201ENST00000373298 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.35□□□□□ -0.75
ITM2A-201ENST00000373298 SMIM28A0A1B0GU29 152 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.35□□□□□ -0.75
ITM2A-201ENST00000373298 TTC26A0AVF1 554 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 LINC01553A4QN01 128 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 EPOPA6NHQ4 379 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 NT5C1B-RDH14C9J2C7 533 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 NFICP08651 508 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 CLTAP09496 248 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 CCNE1P24864 410 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 DNAJB2P25686 324 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 DLG4P78352 724 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 TYRO3Q06418 890 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 BTG3Q14201 252 aaPredicted RBP10.35□□□□□ -0.75
ITM2A-201ENST00000373298 XKR4Q5GH76 650 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 NOMO2Q5JPE7 1267 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 SLFN12LQ6IEE8 588 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 HS2ST1Q7LGA3 356 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 C12orf56Q8IXR9 622 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 TRIML1Q8N9V2 468 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 BCL7CQ8WUZ0 217 aaPredicted RBP10.35□□□□□ -0.75
ITM2A-201ENST00000373298 C17orf80Q9BSJ5 609 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 CCDC94Q9BW85 323 aaPredicted RBP10.35□□□□□ -0.75
ITM2A-201ENST00000373298 TMEM117Q9H0C3 514 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 DNAJC25Q9H1X3 360 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 MTIF3Q9H2K0 278 aaKnown RBP10.35□□□□□ -0.75
ITM2A-201ENST00000373298 NRDE2Q9H7Z3 1164 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 PDE11AQ9HCR9 933 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 TOPORSQ9NS56 1045 aaPredicted RBP10.35□□□□□ -0.75
ITM2A-201ENST00000373298 TUBGCP4Q9UGJ1 667 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 GIT1Q9Y2X7 761 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 INSL6Q9Y581 213 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 PLXNA4Q9HCM2 1894 aa10.35□□□□□ -0.75
ITM2A-201ENST00000373298 PPEF2O14830 753 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 INPPL1O15357 1258 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 EXTL3O43909 919 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 EXOC3O60645 756 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 ITGB1P05556 798 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 SKIP12755 728 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 NR2F2P24468 414 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 ABCD1P33897 745 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 ADAM9Q13443 819 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 SNRNP35Q16560 246 aaKnown RBP10.34□□□□□ -0.75
ITM2A-201ENST00000373298 LRIT3Q3SXY7 679 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 HSP90AA4PQ58FG1 418 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 C1orf220Q5T0J3 134 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 CEP135Q66GS9 1140 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 JADE1Q6IE81 842 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 GLB1LQ6UWU2 654 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 SLC9A9Q8IVB4 645 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 ZC3H3Q8IXZ2 948 aaKnown RBP10.34□□□□□ -0.75
ITM2A-201ENST00000373298 GPD1LQ8N335 351 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 XXYLT1Q8NBI6 393 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 OR5B17Q8NGF7 314 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 ELMO3Q96BJ8 720 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 PGBD4Q96DM1 585 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 DHTKD1Q96HY7 919 aaPredicted RBP10.34□□□□□ -0.75
ITM2A-201ENST00000373298 PPP1R10Q96QC0 940 aaKnown RBP10.34□□□□□ -0.75
ITM2A-201ENST00000373298 RBAKQ9NYW8 714 aaPredicted RBP10.34□□□□□ -0.75
ITM2A-201ENST00000373298 CNTN3Q9P232 1028 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 RABGEF1Q9UJ41 708 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 ATG2AQ2TAZ0 1938 aa10.34□□□□□ -0.75
ITM2A-201ENST00000373298 CASTOR2A6NHX0 329 aa10.33□□□□□ -0.76
ITM2A-201ENST00000373298 RFXAPO00287 272 aa10.33□□□□□ -0.76
ITM2A-201ENST00000373298 PSMA7O14818 248 aa10.33□□□□□ -0.76
ITM2A-201ENST00000373298 CALUO43852 315 aaPredicted RBP10.33□□□□□ -0.76
ITM2A-201ENST00000373298 TAP1Q03518 808 aa10.33□□□□□ -0.76
ITM2A-201ENST00000373298 PAK1Q13153 545 aa10.33□□□□□ -0.76
ITM2A-201ENST00000373298 IRF2BP1Q8IU81 584 aa10.33□□□□□ -0.76
ITM2A-201ENST00000373298 BRSK2Q8IWQ3 736 aa10.33□□□□□ -0.76
ITM2A-201ENST00000373298 COLGALT2Q8IYK4 626 aa10.33□□□□□ -0.76
ITM2A-201ENST00000373298 ABI1Q8IZP0 508 aa10.33□□□□□ -0.76
ITM2A-201ENST00000373298 C3orf58Q8NDZ4 430 aa10.33□□□□□ -0.76
ITM2A-201ENST00000373298 ZNF516Q92618 1163 aa10.33□□□□□ -0.76
ITM2A-201ENST00000373298 CCDC127Q96BQ5 260 aa10.33□□□□□ -0.76
ITM2A-201ENST00000373298 BORCS6Q96GS4 357 aa10.33□□□□□ -0.76
ITM2A-201ENST00000373298 TTYH1Q9H313 450 aaPredicted RBP10.33□□□□□ -0.76
ITM2A-201ENST00000373298 RPF1Q9H9Y2 349 aaKnown RBP10.33□□□□□ -0.76
ITM2A-201ENST00000373298 PCDHA11Q9Y5I1 949 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms