RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 NQO1P15559 274 aaKnown RBP6.97□□□□□ -1.29
CHD6-203ENST00000373233 PLA2G4AP47712 749 aa6.97□□□□□ -1.29
CHD6-203ENST00000373233 ATAD3BQ5T9A4 648 aa6.97□□□□□ -1.29
CHD6-203ENST00000373233 KLHL31Q9H511 634 aa6.97□□□□□ -1.29
CHD6-203ENST00000373233 IL17RBQ9NRM6 502 aa6.97□□□□□ -1.29
CHD6-203ENST00000373233 RWDD2AQ9UIY3 292 aa6.97□□□□□ -1.29
CHD6-203ENST00000373233 TIAM2Q8IVF5 1701 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 CCDC195A0A1B0GUA6 201 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 LIN7AO14910 233 aaPredicted RBP6.96□□□□□ -1.29
CHD6-203ENST00000373233 ECEL1O95672 775 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 PLS3P13797 630 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 SHMT1P34896 483 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 CYP4A11Q02928 519 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 DACT2Q5SW24 774 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 TEDDM1Q5T9Z0 273 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 KRT73Q86Y46 540 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 ZNF577Q9BSK1 485 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 ZNF180Q9UJW8 692 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 YWHAGP61981 247 aaKnown RBP eCLIP6.96□□□□□ -1.29
CHD6-203ENST00000373233 LUZP2Q86TE4 346 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 TCAIMQ8N3R3 496 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 CAPSLQ8WWF8 208 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 LRRC39Q96DD0 335 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 GINS4Q9BRT9 223 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 ATP6V1G2O95670 118 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 PYGBP11216 843 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 JAK1P23458 1154 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 RASSF7Q02833 373 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 APOBEC3HQ6NTF7 200 aaKnown RBP6.96□□□□□ -1.29
CHD6-203ENST00000373233 POTEAQ6S8J7 498 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 FAM151AQ8WW52 585 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 DDX4Q9NQI0 724 aaKnown RBP6.96□□□□□ -1.29
CHD6-203ENST00000373233 KCNQ5Q9NR82 932 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 ZHX2Q9Y6X8 837 aa6.96□□□□□ -1.29
CHD6-203ENST00000373233 GRID2IPA4D2P6 1211 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 F5H6K3 240 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 SMARCA1P28370 1054 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 KLRC3Q07444 240 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 RBL2Q08999 1139 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 PABPC4Q13310 644 aaKnown RBP eCLIP6.96□□□□□ -1.3
CHD6-203ENST00000373233 FSCBQ5H9T9 825 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 ZNF658Q5TYW1 1059 aaPredicted RBP6.96□□□□□ -1.3
CHD6-203ENST00000373233 ILDR1Q86SU0 546 aaPredicted RBP6.96□□□□□ -1.3
CHD6-203ENST00000373233 HNRNPLLQ8WVV9 542 aaKnown RBP6.96□□□□□ -1.3
CHD6-203ENST00000373233 SLC38A10Q9HBR0 1119 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 POTEMA6NI47 508 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.96□□□□□ -1.3
CHD6-203ENST00000373233 M0R3G1 203 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 C10orf76Q5T2E6 689 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 CDR2LQ86X02 465 aaPredicted RBP6.96□□□□□ -1.3
CHD6-203ENST00000373233 PRPF18Q99633 342 aaKnown RBP6.96□□□□□ -1.3
CHD6-203ENST00000373233 RABGEF1Q9UJ41 708 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 TOM1L1O75674 476 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 MTMR2Q13614 643 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 P3H1Q32P28 736 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 DAGLBQ8NCG7 672 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 GOLGA8RI6L899 631 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 SEMA3DO95025 777 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 LDHAP00338 332 aaKnown RBP6.96□□□□□ -1.3
CHD6-203ENST00000373233 H2AFXP16104 143 aaPredicted RBP6.96□□□□□ -1.3
CHD6-203ENST00000373233 POLR2FP61218 127 aaKnown RBP6.96□□□□□ -1.3
CHD6-203ENST00000373233 GRM1Q13255 1194 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 PTPN21Q16825 1174 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 LRRC36Q1X8D7 754 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 HP1BP3Q5SSJ5 553 aaPredicted RBP6.96□□□□□ -1.3
CHD6-203ENST00000373233 CYGBQ8WWM9 190 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 NACA2Q9H009 215 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 BHMT2Q9H2M3 363 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 RABL2BQ9UNT1 228 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 ESYT2A0FGR8 921 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 CBFA2T3O75081 653 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 HSPA8P11142 646 aaKnown RBP6.96□□□□□ -1.3
CHD6-203ENST00000373233 SERPINB8P50452 374 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 MYBPC2Q14324 1141 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 FAM102BQ5T8I3 360 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 METTL16Q86W50 562 aaKnown RBP6.96□□□□□ -1.3
CHD6-203ENST00000373233 POLD4Q9HCU8 107 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 DCTN4Q9UJW0 460 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 H0Y626 953 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 GOLGA8MH3BSY2 632 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 SRGAP2O75044 1071 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 GCLCP48506 637 aaPredicted RBP6.96□□□□□ -1.3
CHD6-203ENST00000373233 HSPA13P48723 471 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 PLEKHA7Q6IQ23 1121 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 MAEAQ7L5Y9 396 aa6.96□□□□□ -1.3
CHD6-203ENST00000373233 MRPL1Q9BYD6 325 aaKnown RBP6.96□□□□□ -1.3
CHD6-203ENST00000373233 GNGT2O14610 69 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 FOXP2O15409 715 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 PEX5P50542 639 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 COPS2P61201 443 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 KRT72Q14CN4 511 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 KCTD17Q8N5Z5 321 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 EFHD2Q96C19 240 aaPredicted RBP6.95□□□□□ -1.3
CHD6-203ENST00000373233 BEGAINQ9BUH8 593 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 ADNPQ9H2P0 1102 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 PARVGQ9HBI0 331 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 ATXN2Q99700 1313 aaKnown RBP6.95□□□□□ -1.3
CHD6-203ENST00000373233 K7ENM7 598 aa6.95□□□□□ -1.3
CHD6-203ENST00000373233 COL9A3Q14050 684 aaPredicted RBP6.95□□□□□ -1.3
CHD6-203ENST00000373233 ZNF280DQ6N043 979 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms