RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 MAN1A1P33908 653 aa6.87□□□□□ -1.31
CHD6-202ENST00000373222 RPS6P62753 249 aaKnown RBP6.87□□□□□ -1.31
CHD6-202ENST00000373222 TNNC1P63316 161 aa6.87□□□□□ -1.31
CHD6-202ENST00000373222 PPATQ06203 517 aa6.87□□□□□ -1.31
CHD6-202ENST00000373222 PPFIA1Q13136 1202 aa6.87□□□□□ -1.31
CHD6-202ENST00000373222 MAPRE1Q15691 268 aaKnown RBP6.87□□□□□ -1.31
CHD6-202ENST00000373222 SLC15A2Q16348 729 aa6.87□□□□□ -1.31
CHD6-202ENST00000373222 TKFCQ3LXA3 575 aa6.87□□□□□ -1.31
CHD6-202ENST00000373222 GLE1Q53GS7 698 aaKnown RBP6.87□□□□□ -1.31
CHD6-202ENST00000373222 PHTF2Q8N3S3 785 aa6.87□□□□□ -1.31
CHD6-202ENST00000373222 SVIPQ8NHG7 77 aa6.87□□□□□ -1.31
CHD6-202ENST00000373222 ACTRT1Q8TDG2 376 aa6.87□□□□□ -1.31
CHD6-202ENST00000373222 ATP8B4Q8TF62 1192 aa6.87□□□□□ -1.31
CHD6-202ENST00000373222 UBLCP1Q8WVY7 318 aaPredicted RBP6.87□□□□□ -1.31
CHD6-202ENST00000373222 BSNDQ8WZ55 320 aa6.87□□□□□ -1.31
CHD6-202ENST00000373222 CNKSR1Q969H4 720 aa6.87□□□□□ -1.31
CHD6-202ENST00000373222 C18orf8Q96DM3 657 aa6.87□□□□□ -1.31
CHD6-202ENST00000373222 KREMEN1Q96MU8 473 aa6.87□□□□□ -1.31
CHD6-202ENST00000373222 DEPDC7Q96QD5 511 aa6.87□□□□□ -1.31
CHD6-202ENST00000373222 PI4K2AQ9BTU6 479 aa6.87□□□□□ -1.31
CHD6-202ENST00000373222 TRIM7Q9C029 511 aa6.87□□□□□ -1.31
CHD6-202ENST00000373222 ISCUQ9H1K1 167 aa6.87□□□□□ -1.31
CHD6-202ENST00000373222 CNOT8Q9UFF9 292 aaKnown RBP6.87□□□□□ -1.31
CHD6-202ENST00000373222 PGAP2Q9UHJ9 254 aa6.87□□□□□ -1.31
CHD6-202ENST00000373222 NFS1Q9Y697 457 aa6.87□□□□□ -1.31
CHD6-202ENST00000373222 TNS1Q9HBL0 1735 aaKnown RBP6.87□□□□□ -1.31
CHD6-202ENST00000373222 ZBBXA8MT70 800 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 BTNL10A8MVZ5 291 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 GOLGA8KD6RF30 607 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 CYP26A1O43174 497 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 FTLP02792 175 aaPredicted RBP6.86□□□□□ -1.31
CHD6-202ENST00000373222 SHBGP04278 402 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 IVLP07476 585 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 DPEP1P16444 411 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 FERP16591 822 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 NPR3P17342 541 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 CHRNB2P17787 502 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 KCNA3P22001 575 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 LIG3P49916 1009 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 WNT7BP56706 349 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 DHX9Q08211 1270 aaKnown RBP6.86□□□□□ -1.31
CHD6-202ENST00000373222 ZNF844Q08AG5 666 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 PPP4R4Q6NUP7 873 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 PACS2Q86VP3 889 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 SIX5Q8N196 739 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 PPM1KQ8N3J5 372 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 CHURC1Q8WUH1 139 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 RFFLQ8WZ73 363 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 CRELD1Q96HD1 420 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 TMEM117Q9H0C3 514 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 HSPBP1Q9NZL4 362 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 CWC15Q9P013 229 aaKnown RBP6.86□□□□□ -1.31
CHD6-202ENST00000373222 TSR3Q9UJK0 312 aaKnown RBP6.86□□□□□ -1.31
CHD6-202ENST00000373222 MRPL11Q9Y3B7 192 aaKnown RBP6.86□□□□□ -1.31
CHD6-202ENST00000373222 BZW2Q9Y6E2 419 aaKnown RBP6.86□□□□□ -1.31
CHD6-202ENST00000373222 ADGRA3Q8IWK6 1321 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 PARP14Q460N5 1801 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 POLR2AP24928 1970 aaKnown RBP6.86□□□□□ -1.31
CHD6-202ENST00000373222 GTPBP10A4D1E9 387 aaKnown RBP6.86□□□□□ -1.31
CHD6-202ENST00000373222 CCDC85CA6NKD9 419 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 SMIM23A6NLE4 172 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 FOXO6A8MYZ6 492 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 OPA1O60313 960 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 WFS1O76024 890 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 MMEP08473 750 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 POU3F3P20264 500 aaPredicted RBP6.86□□□□□ -1.31
CHD6-202ENST00000373222 NR1D1P20393 614 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 TNFAIP3P21580 790 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 YWHABP31946 246 aaKnown RBP6.86□□□□□ -1.31
CHD6-202ENST00000373222 CTNNA1P35221 906 aaKnown RBP6.86□□□□□ -1.31
CHD6-202ENST00000373222 HSPA9P38646 679 aaKnown RBP6.86□□□□□ -1.31
CHD6-202ENST00000373222 KCNJ1P48048 391 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 HSD17B4P51659 736 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 VAMP7P51809 220 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 CXCL9Q07325 125 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 MTMR1Q13613 665 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 MESDQ14696 234 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 FAM102BQ5T8I3 360 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 ALS2CLQ60I27 953 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 TTC27Q6P3X3 843 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 DLK2Q6UY11 383 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 HAUS6Q7Z4H7 955 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 HELQQ8TDG4 1101 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 SYTL5Q8TDW5 730 aaPredicted RBP6.86□□□□□ -1.31
CHD6-202ENST00000373222 PPM1EQ8WY54 764 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 CTNNBL1Q8WYA6 563 aaPredicted RBP6.86□□□□□ -1.31
CHD6-202ENST00000373222 AGO4Q9HCK5 861 aaKnown RBP6.86□□□□□ -1.31
CHD6-202ENST00000373222 SUCLA2Q9P2R7 463 aaPredicted RBP6.86□□□□□ -1.31
CHD6-202ENST00000373222 RNF14Q9UBS8 474 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 AMFRQ9UKV5 643 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 NOD1Q9Y239 953 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 ATP8A1Q9Y2Q0 1164 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 ALG6Q9Y672 507 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 PFASO15067 1338 aa6.86□□□□□ -1.31
CHD6-202ENST00000373222 ARID2Q68CP9 1835 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 CCDC169A6NNP5 214 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 PHF20L1A8MW92 1017 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 NDUFB5O43674 189 aa6.85□□□□□ -1.31
CHD6-202ENST00000373222 PPP1R12BO60237 982 aaPredicted RBP6.85□□□□□ -1.31
CHD6-202ENST00000373222 ICAM1P05362 532 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms