RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 CASTOR2A6NHX0 329 aa21.12■□□□□ 0.97
TRAPPC3-204ENST00000373166 CCL16O15467 120 aa21.12■□□□□ 0.97
TRAPPC3-204ENST00000373166 USO1O60763 962 aaKnown RBP21.12■□□□□ 0.97
TRAPPC3-204ENST00000373166 SDHBP21912 280 aa21.12■□□□□ 0.97
TRAPPC3-204ENST00000373166 CSTF1Q05048 431 aaKnown RBP21.12■□□□□ 0.97
TRAPPC3-204ENST00000373166 ELAVL2Q12926 359 aaKnown RBP21.12■□□□□ 0.97
TRAPPC3-204ENST00000373166 PDIA5Q14554 519 aa21.12■□□□□ 0.97
TRAPPC3-204ENST00000373166 DTHD1Q6ZMT9 781 aa21.12■□□□□ 0.97
TRAPPC3-204ENST00000373166 BRAPQ7Z569 592 aa21.12■□□□□ 0.97
TRAPPC3-204ENST00000373166 GPR161Q8N6U8 529 aaKnown RBP21.12■□□□□ 0.97
TRAPPC3-204ENST00000373166 ITFG1Q8TB96 612 aa21.12■□□□□ 0.97
TRAPPC3-204ENST00000373166 SNX29Q8TEQ0 813 aa21.12■□□□□ 0.97
TRAPPC3-204ENST00000373166 PRIMPOLQ96LW4 560 aa21.12■□□□□ 0.97
TRAPPC3-204ENST00000373166 POLR3FQ9H1D9 316 aaPredicted RBP21.12■□□□□ 0.97
TRAPPC3-204ENST00000373166 PRMT7Q9NVM4 692 aaPredicted RBP21.12■□□□□ 0.97
TRAPPC3-204ENST00000373166 MTF2Q9Y483 593 aaPredicted RBP21.12■□□□□ 0.97
TRAPPC3-204ENST00000373166 OTOGLQ3ZCN5 2332 aa21.11■□□□□ 0.97
TRAPPC3-204ENST00000373166 DOCK8Q8NF50 2099 aa21.11■□□□□ 0.97
TRAPPC3-204ENST00000373166 KIF4AO95239 1232 aa21.11■□□□□ 0.97
TRAPPC3-204ENST00000373166 THP07101 528 aa21.11■□□□□ 0.97
TRAPPC3-204ENST00000373166 POU2F2P09086 479 aa21.11■□□□□ 0.97
TRAPPC3-204ENST00000373166 ATP2C1P98194 919 aaPredicted RBP21.11■□□□□ 0.97
TRAPPC3-204ENST00000373166 UVSSAQ2YD98 709 aa21.11■□□□□ 0.97
TRAPPC3-204ENST00000373166 ZBTB41Q5SVQ8 909 aa21.11■□□□□ 0.97
TRAPPC3-204ENST00000373166 AXDND1Q5T1B0 1012 aaPredicted RBP21.11■□□□□ 0.97
TRAPPC3-204ENST00000373166 IGSF22Q8N9C0 903 aa21.11■□□□□ 0.97
TRAPPC3-204ENST00000373166 MCPH1Q8NEM0 835 aa21.11■□□□□ 0.97
TRAPPC3-204ENST00000373166 SLC7A14Q8TBB6 771 aa21.11■□□□□ 0.97
TRAPPC3-204ENST00000373166 SECISBP2LQ93073 1101 aaKnown RBP21.11■□□□□ 0.97
TRAPPC3-204ENST00000373166 INTS4Q96HW7 963 aaKnown RBP21.11■□□□□ 0.97
TRAPPC3-204ENST00000373166 NELL2Q99435 816 aa21.11■□□□□ 0.97
TRAPPC3-204ENST00000373166 KCNH3Q9ULD8 1083 aa21.11■□□□□ 0.97
TRAPPC3-204ENST00000373166 A0A087WWV3 80 aa21.1■□□□□ 0.97
TRAPPC3-204ENST00000373166 ARHGEF35A5YM69 484 aa21.1■□□□□ 0.97
TRAPPC3-204ENST00000373166 LRRIQ4A6NIV6 560 aa21.1■□□□□ 0.97
TRAPPC3-204ENST00000373166 NCAM2O15394 837 aa21.1■□□□□ 0.97
TRAPPC3-204ENST00000373166 RAB33AQ14088 237 aa21.1■□□□□ 0.97
TRAPPC3-204ENST00000373166 KRT79Q5XKE5 535 aa21.1■□□□□ 0.97
TRAPPC3-204ENST00000373166 PPP4R3CPQ6ZMV5 832 aa21.1■□□□□ 0.97
TRAPPC3-204ENST00000373166 RTL10Q7L3V2 364 aa21.1■□□□□ 0.97
TRAPPC3-204ENST00000373166 KXD1Q9BQD3 176 aa21.1■□□□□ 0.97
TRAPPC3-204ENST00000373166 LTB4R2Q9NPC1 389 aa21.1■□□□□ 0.97
TRAPPC3-204ENST00000373166 PTGESO14684 152 aa21.09■□□□□ 0.97
TRAPPC3-204ENST00000373166 ADAM12O43184 909 aa21.09■□□□□ 0.97
TRAPPC3-204ENST00000373166 CD72P21854 359 aa21.09■□□□□ 0.97
TRAPPC3-204ENST00000373166 OR1D2P34982 312 aa21.09■□□□□ 0.97
TRAPPC3-204ENST00000373166 PABPC1LQ4VXU2 614 aaKnown RBP21.09■□□□□ 0.97
TRAPPC3-204ENST00000373166 ZBTB8OSQ8IWT0 167 aa21.09■□□□□ 0.97
TRAPPC3-204ENST00000373166 ZSCAN32Q9NX65 697 aa21.09■□□□□ 0.97
TRAPPC3-204ENST00000373166 NCOR2Q9Y618 2525 aa21.08■□□□□ 0.97
TRAPPC3-204ENST00000373166 N4BP3O15049 544 aa21.08■□□□□ 0.97
TRAPPC3-204ENST00000373166 FAM187BQ17R55 369 aa21.08■□□□□ 0.97
TRAPPC3-204ENST00000373166 TMEM132AQ24JP5 1023 aa21.08■□□□□ 0.97
TRAPPC3-204ENST00000373166 PADI6Q6TGC4 694 aa21.08■□□□□ 0.97
TRAPPC3-204ENST00000373166 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.08■□□□□ 0.97
TRAPPC3-204ENST00000373166 MAEAQ7L5Y9 396 aa21.08■□□□□ 0.97
TRAPPC3-204ENST00000373166 NPAS3Q8IXF0 933 aa21.08■□□□□ 0.97
TRAPPC3-204ENST00000373166 ZBTB44Q8NCP5 570 aa21.08■□□□□ 0.97
TRAPPC3-204ENST00000373166 CLDN23Q96B33 292 aa21.08■□□□□ 0.97
TRAPPC3-204ENST00000373166 FZD8Q9H461 694 aa21.08■□□□□ 0.97
TRAPPC3-204ENST00000373166 DDX19AQ9NUU7 478 aaKnown RBP21.08■□□□□ 0.97
TRAPPC3-204ENST00000373166 HCFC1R1Q9NWW0 138 aa21.08■□□□□ 0.97
TRAPPC3-204ENST00000373166 SNTG2Q9NY99 539 aa21.08■□□□□ 0.97
TRAPPC3-204ENST00000373166 DNMT3BQ9UBC3 853 aaKnown RBP21.08■□□□□ 0.97
TRAPPC3-204ENST00000373166 KIAA1024Q9UPX6 916 aa21.08■□□□□ 0.97
TRAPPC3-204ENST00000373166 RECQL4O94761 1208 aa21.07■□□□□ 0.96
TRAPPC3-204ENST00000373166 BMP15O95972 392 aa21.07■□□□□ 0.96
TRAPPC3-204ENST00000373166 IL17AQ16552 155 aa21.07■□□□□ 0.96
TRAPPC3-204ENST00000373166 ARL6IP4Q66PJ3 421 aaKnown RBP21.07■□□□□ 0.96
TRAPPC3-204ENST00000373166 ZNF852Q6ZMS4 543 aa21.07■□□□□ 0.96
TRAPPC3-204ENST00000373166 TPRG1Q6ZUI0 275 aa21.07■□□□□ 0.96
TRAPPC3-204ENST00000373166 HSCBQ8IWL3 235 aa21.07■□□□□ 0.96
TRAPPC3-204ENST00000373166 SNX21Q969T3 373 aa21.07■□□□□ 0.96
TRAPPC3-204ENST00000373166 ADPGKQ9BRR6 497 aa21.07■□□□□ 0.96
TRAPPC3-204ENST00000373166 GPRC5CQ9NQ84 441 aa21.07■□□□□ 0.96
TRAPPC3-204ENST00000373166 FOXD4L1Q9NU39 408 aa21.07■□□□□ 0.96
TRAPPC3-204ENST00000373166 GDE1Q9NZC3 331 aa21.07■□□□□ 0.96
TRAPPC3-204ENST00000373166 MRPS17Q9Y2R5 130 aaKnown RBP21.07■□□□□ 0.96
TRAPPC3-204ENST00000373166 MRPS23Q9Y3D9 190 aaKnown RBP21.07■□□□□ 0.96
TRAPPC3-204ENST00000373166 MTCL1Q9Y4B5 1905 aaKnown RBP21.07■□□□□ 0.96
TRAPPC3-204ENST00000373166 CEP250Q9BV73 2442 aa21.07■□□□□ 0.96
TRAPPC3-204ENST00000373166 TDRD15B5MCY1 1934 aaKnown RBP21.06■□□□□ 0.96
TRAPPC3-204ENST00000373166 VWA3AA6NCI4 1184 aa21.06■□□□□ 0.96
TRAPPC3-204ENST00000373166 PP2D1A8MPX8 630 aa21.06■□□□□ 0.96
TRAPPC3-204ENST00000373166 ECI2O75521 394 aa21.06■□□□□ 0.96
TRAPPC3-204ENST00000373166 RPS9P46781 194 aaKnown RBP21.06■□□□□ 0.96
TRAPPC3-204ENST00000373166 PRPF4BQ13523 1007 aaKnown RBP21.06■□□□□ 0.96
TRAPPC3-204ENST00000373166 NAB2Q15742 525 aa21.06■□□□□ 0.96
TRAPPC3-204ENST00000373166 CDCA2Q69YH5 1023 aaPredicted RBP21.06■□□□□ 0.96
TRAPPC3-204ENST00000373166 ING5Q8WYH8 240 aa21.06■□□□□ 0.96
TRAPPC3-204ENST00000373166 C2orf40Q9H1Z8 148 aa21.06■□□□□ 0.96
TRAPPC3-204ENST00000373166 EPC1Q9H2F5 836 aa21.06■□□□□ 0.96
TRAPPC3-204ENST00000373166 BHMT2Q9H2M3 363 aa21.06■□□□□ 0.96
TRAPPC3-204ENST00000373166 PDZD7Q9H5P4 517 aa21.06■□□□□ 0.96
TRAPPC3-204ENST00000373166 MTRRQ9UBK8 725 aa21.06■□□□□ 0.96
TRAPPC3-204ENST00000373166 SMG5Q9UPR3 1016 aaKnown RBP21.06■□□□□ 0.96
TRAPPC3-204ENST00000373166 GPR179Q6PRD1 2367 aa21.05■□□□□ 0.96
TRAPPC3-204ENST00000373166 PRR5-ARHGAP8B1AHC4 643 aa21.05■□□□□ 0.96
TRAPPC3-204ENST00000373166 B3GAT3O94766 335 aa21.05■□□□□ 0.96
TRAPPC3-204ENST00000373166 CYP11B2P19099 503 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms