RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 ZNF235Q14590 738 aa20.76■□□□□ 0.91
LMO4-202ENST00000370544 NAB2Q15742 525 aa20.76■□□□□ 0.91
LMO4-202ENST00000370544 KCNN4O15554 427 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 IL18RAPO95256 599 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 XRRA1Q6P2D8 792 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 NUDCD3Q8IVD9 361 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 DEFB129Q9H1M3 183 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 SCOCQ9UIL1 159 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 DCTN4Q9UJW0 460 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 CEP170BQ9Y4F5 1589 aaPredicted RBP20.75■□□□□ 0.91
LMO4-202ENST00000370544 A0A1W2PQJ5 194 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 TRAPPC3O43617 180 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 SLC9A1P19634 815 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 HNRNPH2P55795 449 aaKnown RBP20.75■□□□□ 0.91
LMO4-202ENST00000370544 LRRC14Q15048 493 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 GRAMD1BQ3KR37 738 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 CATSPER3Q86XQ3 398 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 SLC13A4Q9UKG4 626 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 AGLP35573 1532 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 CTSHP09668 335 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 PDGFRAP16234 1089 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 ATF7IP2Q5U623 682 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 NLRP14Q86W24 1093 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 SNX19Q92543 992 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 NCLNQ969V3 563 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 DACT3Q96B18 629 aaPredicted RBP20.75■□□□□ 0.91
LMO4-202ENST00000370544 ASIC4Q96FT7 647 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 MCEEQ96PE7 176 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 LMNAP02545 664 aaKnown RBP20.75■□□□□ 0.91
LMO4-202ENST00000370544 VSNL1P62760 191 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 AGBL3Q8NEM8 1001 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 OR6P1Q8NGX9 317 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 ATG4CQ96DT6 458 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 TMEM8AQ9HCN3 771 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 IGSF9BQ9UPX0 1349 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 RARBP10826 455 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 ACCSLQ4AC99 568 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 TRMT10CQ7L0Y3 403 aaKnown RBP20.75■□□□□ 0.91
LMO4-202ENST00000370544 TC2NQ8N9U0 490 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 ULK4Q96C45 1275 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 POLR3CQ9BUI4 534 aaPredicted RBP20.75■□□□□ 0.91
LMO4-202ENST00000370544 TMEM117Q9H0C3 514 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 TJP2Q9UDY2 1190 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 L3MBTL1Q9Y468 752 aa20.75■□□□□ 0.91
LMO4-202ENST00000370544 TYK2P29597 1187 aa20.74■□□□□ 0.91
LMO4-202ENST00000370544 ARFIP2P53365 341 aa20.74■□□□□ 0.91
LMO4-202ENST00000370544 IMPG1Q17R60 797 aa20.74■□□□□ 0.91
LMO4-202ENST00000370544 MKNK1Q9BUB5 465 aa20.74■□□□□ 0.91
LMO4-202ENST00000370544 C6orf222P0C671 652 aaPredicted RBP20.74■□□□□ 0.91
LMO4-202ENST00000370544 EEF1B2P24534 225 aaKnown RBP20.74■□□□□ 0.91
LMO4-202ENST00000370544 TROAPQ12815 778 aa20.74■□□□□ 0.91
LMO4-202ENST00000370544 STAT4Q14765 748 aa20.74■□□□□ 0.91
LMO4-202ENST00000370544 ANKMY2Q8IV38 441 aa20.74■□□□□ 0.91
LMO4-202ENST00000370544 ELOA2Q8IYF1 753 aaPredicted RBP20.74■□□□□ 0.91
LMO4-202ENST00000370544 PIP4K2CQ8TBX8 421 aa20.74■□□□□ 0.91
LMO4-202ENST00000370544 PGBD4Q96DM1 585 aa20.74■□□□□ 0.91
LMO4-202ENST00000370544 HLA-DRAP01903 254 aa20.74■□□□□ 0.91
LMO4-202ENST00000370544 ATP9BO43861 1147 aa20.74■□□□□ 0.91
LMO4-202ENST00000370544 EXTL3O43909 919 aa20.74■□□□□ 0.91
LMO4-202ENST00000370544 PEX19P40855 299 aa20.74■□□□□ 0.91
LMO4-202ENST00000370544 HADHAP40939 763 aa20.74■□□□□ 0.91
LMO4-202ENST00000370544 INPP1P49441 399 aa20.74■□□□□ 0.91
LMO4-202ENST00000370544 RNF217Q8TC41 542 aa20.74■□□□□ 0.91
LMO4-202ENST00000370544 ITSN1Q15811 1721 aa20.73■□□□□ 0.91
LMO4-202ENST00000370544 DIAPH2O60879 1101 aa20.73■□□□□ 0.91
LMO4-202ENST00000370544 GRIN1Q05586 938 aa20.73■□□□□ 0.91
LMO4-202ENST00000370544 LRRC37BQ96QE4 947 aa20.73■□□□□ 0.91
LMO4-202ENST00000370544 TAAR1Q96RJ0 339 aa20.73■□□□□ 0.91
LMO4-202ENST00000370544 TRPV6Q9H1D0 765 aa20.73■□□□□ 0.91
LMO4-202ENST00000370544 TRIM10Q9UDY6 481 aa20.73■□□□□ 0.91
LMO4-202ENST00000370544 UBA6A0AVT1 1052 aaPredicted RBP20.73■□□□□ 0.91
LMO4-202ENST00000370544 FOXP2O15409 715 aa20.73■□□□□ 0.91
LMO4-202ENST00000370544 KLK7P49862 253 aa20.73■□□□□ 0.91
LMO4-202ENST00000370544 TMEM62Q0P6H9 643 aa20.73■□□□□ 0.91
LMO4-202ENST00000370544 TAS2R42Q7RTR8 314 aa20.73■□□□□ 0.91
LMO4-202ENST00000370544 SAMD7Q7Z3H4 446 aa20.73■□□□□ 0.91
LMO4-202ENST00000370544 ZC3H15Q8WU90 426 aaKnown RBP20.73■□□□□ 0.91
LMO4-202ENST00000370544 PIDD1Q9HB75 910 aa20.73■□□□□ 0.91
LMO4-202ENST00000370544 ANKEF1Q9NU02 776 aa20.73■□□□□ 0.91
LMO4-202ENST00000370544 PIGHQ14442 188 aaPredicted RBP20.73■□□□□ 0.91
LMO4-202ENST00000370544 IER5Q5VY09 327 aa20.73■□□□□ 0.91
LMO4-202ENST00000370544 MED15Q96RN5 788 aa20.73■□□□□ 0.91
LMO4-202ENST00000370544 KIAA1210Q9ULL0 1709 aa20.73■□□□□ 0.91
LMO4-202ENST00000370544 ZNF157P51786 506 aaPredicted RBP20.73■□□□□ 0.91
LMO4-202ENST00000370544 P3H1Q32P28 736 aa20.73■□□□□ 0.91
LMO4-202ENST00000370544 SH3TC2Q8TF17 1288 aa20.73■□□□□ 0.91
LMO4-202ENST00000370544 BTBD6Q96KE9 485 aa20.73■□□□□ 0.91
LMO4-202ENST00000370544 SUDS3Q9H7L9 328 aaPredicted RBP20.73■□□□□ 0.91
LMO4-202ENST00000370544 PPP1R3GB7ZBB8 358 aa20.72■□□□□ 0.91
LMO4-202ENST00000370544 ESRRBO95718 433 aa20.72■□□□□ 0.91
LMO4-202ENST00000370544 EFCAB12Q6NXP0 572 aa20.72■□□□□ 0.91
LMO4-202ENST00000370544 RAD9BQ6WBX8 426 aa20.72■□□□□ 0.91
LMO4-202ENST00000370544 RMDN1Q96DB5 314 aa20.72■□□□□ 0.91
LMO4-202ENST00000370544 TRIM51Q9BSJ1 452 aa20.72■□□□□ 0.91
LMO4-202ENST00000370544 SMYD3Q9H7B4 428 aa20.72■□□□□ 0.91
LMO4-202ENST00000370544 FARP1Q9Y4F1 1045 aaPredicted RBP20.72■□□□□ 0.91
LMO4-202ENST00000370544 SLC37A4O43826 429 aa20.72■□□□□ 0.91
LMO4-202ENST00000370544 CD4P01730 458 aa20.72■□□□□ 0.91
LMO4-202ENST00000370544 CYP2C19P33261 490 aa20.72■□□□□ 0.91
LMO4-202ENST00000370544 LRRC71Q8N4P6 559 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms