RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 ERVK-21P61565 698 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 TYRO3Q06418 890 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 CYP24A1Q07973 514 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 NAB2Q15742 525 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 ZBTB6Q15916 424 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 GLRA4Q5JXX5 417 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 GPR153Q6NV75 609 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 ZNF280BQ86YH2 543 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 COLGALT2Q8IYK4 626 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 ZNF558Q96NG5 402 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 CXCL16Q9H2A7 254 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 PCDHB12Q9Y5F1 795 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 RALGAPA2Q2PPJ7 1873 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 C5orf67F2Z3F1 127 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 ZC3H11AO75152 810 aaKnown RBP eCLIP16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 AKAP3O75969 853 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 RB1P06400 928 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 EPB41P11171 864 aaKnown RBP16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 PPM1AP35813 382 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 BMPR1AP36894 532 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 CASP4P49662 377 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 BCAR1P56945 870 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 STX17P56962 302 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 TMEM132DQ14C87 1099 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 JADE1Q6IE81 842 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 KCNT2Q6UVM3 1135 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 INTS8Q75QN2 995 aaKnown RBP16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 FAM186BQ8IYM0 893 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 CSGALNACT2Q8N6G5 542 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 CACTINQ8WUQ7 758 aaKnown RBP16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 DDX27Q96GQ7 796 aaKnown RBP16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 FNBP1Q96RU3 617 aa16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 DUSP9Q99956 384 aaKnown RBP16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 NAT10Q9H0A0 1025 aaKnown RBP16.85■□□□□ 0.29
PRPF38B-202ENST00000370022 GBF1Q92538 1859 aa16.84■□□□□ 0.29
PRPF38B-202ENST00000370022 SYCE3A1L190 88 aa16.84■□□□□ 0.29
PRPF38B-202ENST00000370022 GNA14O95837 355 aa16.84■□□□□ 0.29
PRPF38B-202ENST00000370022 RPL9P32969 192 aaKnown RBP16.84■□□□□ 0.29
PRPF38B-202ENST00000370022 SPATA1Q5VX52 437 aa16.84■□□□□ 0.29
PRPF38B-202ENST00000370022 FILIP1Q7Z7B0 1213 aa16.84■□□□□ 0.29
PRPF38B-202ENST00000370022 WDR49Q8IV35 697 aa16.84■□□□□ 0.29
PRPF38B-202ENST00000370022 COLGALT1Q8NBJ5 622 aa16.84■□□□□ 0.29
PRPF38B-202ENST00000370022 BEST2Q8NFU1 509 aa16.84■□□□□ 0.29
PRPF38B-202ENST00000370022 TMC2Q8TDI7 906 aa16.84■□□□□ 0.29
PRPF38B-202ENST00000370022 PDE11AQ9HCR9 933 aa16.84■□□□□ 0.29
PRPF38B-202ENST00000370022 DNAJB4Q9UDY4 337 aa16.84■□□□□ 0.29
PRPF38B-202ENST00000370022 CITO14578 2027 aa16.84■□□□□ 0.29
PRPF38B-202ENST00000370022 SOX1O00570 391 aaPredicted RBP16.83■□□□□ 0.28
PRPF38B-202ENST00000370022 ARHGEF15O94989 841 aa16.83■□□□□ 0.28
PRPF38B-202ENST00000370022 GALTP07902 379 aa16.83■□□□□ 0.28
PRPF38B-202ENST00000370022 NFICP08651 508 aa16.83■□□□□ 0.28
PRPF38B-202ENST00000370022 KRT13P13646 458 aa16.83■□□□□ 0.28
PRPF38B-202ENST00000370022 CTNNB1P35222 781 aa16.83■□□□□ 0.28
PRPF38B-202ENST00000370022 FXR1P51114 621 aaKnown RBP eCLIP16.83■□□□□ 0.28
PRPF38B-202ENST00000370022 AP3M2P53677 418 aa16.83■□□□□ 0.28
PRPF38B-202ENST00000370022 MCCD1P59942 119 aaPredicted RBP16.83■□□□□ 0.28
PRPF38B-202ENST00000370022 SPAG1Q07617 926 aa16.83■□□□□ 0.28
PRPF38B-202ENST00000370022 ZSCAN23Q3MJ62 389 aa16.83■□□□□ 0.28
PRPF38B-202ENST00000370022 METTL14Q9HCE5 456 aaKnown RBP16.83■□□□□ 0.28
PRPF38B-202ENST00000370022 HCSTQ9UBK5 93 aa16.83■□□□□ 0.28
PRPF38B-202ENST00000370022 STK39Q9UEW8 545 aa16.83■□□□□ 0.28
PRPF38B-202ENST00000370022 FAN1Q9Y2M0 1017 aa16.83■□□□□ 0.28
PRPF38B-202ENST00000370022 TRIOBPQ9H2D6 2365 aa16.82■□□□□ 0.28
PRPF38B-202ENST00000370022 NRP1O14786 923 aa16.82■□□□□ 0.28
PRPF38B-202ENST00000370022 LRPAP1P30533 357 aa16.82■□□□□ 0.28
PRPF38B-202ENST00000370022 OR1G1P47890 313 aa16.82■□□□□ 0.28
PRPF38B-202ENST00000370022 SLC11A1P49279 550 aa16.82■□□□□ 0.28
PRPF38B-202ENST00000370022 CLDN10P78369 228 aa16.82■□□□□ 0.28
PRPF38B-202ENST00000370022 TPD52L1Q16890 204 aaPredicted RBP16.82■□□□□ 0.28
PRPF38B-202ENST00000370022 DUOXA2Q1HG44 320 aa16.82■□□□□ 0.28
PRPF38B-202ENST00000370022 EPC2Q52LR7 807 aa16.82■□□□□ 0.28
PRPF38B-202ENST00000370022 EFCAB13Q8IY85 973 aa16.82■□□□□ 0.28
PRPF38B-202ENST00000370022 PARD3BQ8TEW8 1205 aa16.82■□□□□ 0.28
PRPF38B-202ENST00000370022 CCDC127Q96BQ5 260 aa16.82■□□□□ 0.28
PRPF38B-202ENST00000370022 ANKRD36BP1Q96IX9 119 aa16.82■□□□□ 0.28
PRPF38B-202ENST00000370022 CGRRF1Q99675 332 aa16.82■□□□□ 0.28
PRPF38B-202ENST00000370022 C17orf80Q9BSJ5 609 aa16.82■□□□□ 0.28
PRPF38B-202ENST00000370022 FUCA2Q9BTY2 467 aa16.82■□□□□ 0.28
PRPF38B-202ENST00000370022 C11orf84Q9BUA3 381 aaPredicted RBP16.82■□□□□ 0.28
PRPF38B-202ENST00000370022 COLEC11Q9BWP8 271 aa16.82■□□□□ 0.28
PRPF38B-202ENST00000370022 ZNF576Q9H609 170 aa16.82■□□□□ 0.28
PRPF38B-202ENST00000370022 SPG21Q9NZD8 308 aa16.82■□□□□ 0.28
PRPF38B-202ENST00000370022 LAMA3Q16787 3333 aa16.82■□□□□ 0.28
PRPF38B-202ENST00000370022 TDRD15B5MCY1 1934 aaKnown RBP16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 CASTOR2A6NHX0 329 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 TMEM189-UBE2V1I3L0A0 370 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 IKBKBO14920 756 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 B4GALT3O60512 393 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 TMEM191BP0C7N4 346 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 DLATP10515 647 aaKnown RBP16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 TNNI1P19237 187 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 VAMP7P51809 220 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 WNT7BP56706 349 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 TFAMQ00059 246 aaKnown RBP16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 PLCB3Q01970 1234 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 SOX4Q06945 474 aaPredicted RBP16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 BFSP1Q12934 665 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 UPP1Q16831 310 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 ZNF697Q5TEC3 545 aa16.81■□□□□ 0.28
PRPF38B-202ENST00000370022 DCLRE1AQ6PJP8 1040 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms