RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 MYCT1Q8N699 235 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 TMEM161BQ8NDZ6 487 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 TCP11Q8WWU5 503 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 SLC7A3Q8WY07 619 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 PABPC5Q96DU9 382 aaKnown RBP9.58□□□□□ -0.88
SNX27-201ENST00000368838 FAM122AQ96E09 287 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 CNOT6LQ96LI5 555 aaKnown RBP9.58□□□□□ -0.88
SNX27-201ENST00000368838 CCDC43Q96MW1 224 aaKnown RBP9.58□□□□□ -0.88
SNX27-201ENST00000368838 TUBGCP2Q9BSJ2 902 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 CELF4Q9BZC1 486 aaKnown RBP9.58□□□□□ -0.88
SNX27-201ENST00000368838 TMX1Q9H3N1 280 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 HCSTQ9UBK5 93 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 FBXL5Q9UKA1 691 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 STYXL1Q9Y6J8 313 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 ARID2Q68CP9 1835 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 ZNF318Q5VUA4 2279 aa9.58□□□□□ -0.88
SNX27-201ENST00000368838 NPHP3-ACAD11A0A0J9YXS1 232 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 A0A1W2PQJ5 194 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 TRIM49BA6NDI0 452 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 PI4K2BG5E9Z4 385 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 N4BP3O15049 544 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 P4HA2O15460 535 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 NRDCO43847 1150 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 MGEA5O60502 916 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 TBX10O75333 385 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 AP1G2O75843 785 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 KLRC1P26715 233 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 IRS1P35568 1242 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 PLA2G5P39877 138 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 CASP5P51878 434 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 EFNA5P52803 228 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 ADAM9Q13443 819 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 CAMK1Q14012 370 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 MXD4Q14582 209 aaPredicted RBP9.57□□□□□ -0.88
SNX27-201ENST00000368838 MIIPQ5JXC2 388 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 HAUS6Q7Z4H7 955 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 RBM23Q86U06 439 aaKnown RBP9.57□□□□□ -0.88
SNX27-201ENST00000368838 LINC01465Q8N7H1 131 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 GLIS3Q8NEA6 775 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 TMEM40Q8WWA1 233 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 GLMNQ92990 594 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 ZNF689Q96CS4 500 aaPredicted RBP9.57□□□□□ -0.88
SNX27-201ENST00000368838 ZNF668Q96K58 619 aaPredicted RBP9.57□□□□□ -0.88
SNX27-201ENST00000368838 FBXL18Q96ME1 805 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 ACCSQ96QU6 501 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 PANX2Q96RD6 677 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 C11orf84Q9BUA3 381 aaPredicted RBP9.57□□□□□ -0.88
SNX27-201ENST00000368838 NAA15Q9BXJ9 866 aaKnown RBP9.57□□□□□ -0.88
SNX27-201ENST00000368838 LRFN2Q9ULH4 789 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 MAPK8IP1Q9UQF2 711 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 USP20Q9Y2K6 914 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 NOC2LQ9Y3T9 749 aaKnown RBP9.57□□□□□ -0.88
SNX27-201ENST00000368838 TECTAO75443 2155 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 ZMYM2Q9UBW7 1377 aa9.57□□□□□ -0.88
SNX27-201ENST00000368838 ESPNB1AK53 854 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 ZBTB42B2RXF5 422 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 C5orf67F2Z3F1 127 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 STX10O60499 249 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 USO1O60763 962 aaKnown RBP9.56□□□□□ -0.88
SNX27-201ENST00000368838 GCNT3O95395 438 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 VTNP04004 478 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 NR3C1P04150 777 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 RPLP2P05387 115 aaKnown RBP9.56□□□□□ -0.88
SNX27-201ENST00000368838 ITGB1P05556 798 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 GARTP22102 1010 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 NR2F2P24468 414 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 HNRNPH3P31942 346 aaKnown RBP9.56□□□□□ -0.88
SNX27-201ENST00000368838 PSMC2P35998 433 aaKnown RBP9.56□□□□□ -0.88
SNX27-201ENST00000368838 NPTX2P47972 431 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 NPEPPSP55786 919 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 RBM10P98175 930 aaKnown RBP9.56□□□□□ -0.88
SNX27-201ENST00000368838 CDK17Q00537 523 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 EMC2Q15006 297 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 PCBP1Q15365 356 aaKnown RBP eCLIP9.56□□□□□ -0.88
SNX27-201ENST00000368838 KIZQ2M2Z5 673 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 VWA3BQ502W6 1294 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 SPOUT1Q5T280 376 aaKnown RBP9.56□□□□□ -0.88
SNX27-201ENST00000368838 CDCA2Q69YH5 1023 aaPredicted RBP9.56□□□□□ -0.88
SNX27-201ENST00000368838 ZPBP2Q6X784 338 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 FAM43BQ6ZT52 329 aaPredicted RBP9.56□□□□□ -0.88
SNX27-201ENST00000368838 CCDC186Q7Z3E2 898 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 CNGA4Q8IV77 575 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 KIAA0319LQ8IZA0 1049 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 METTL13Q8N6R0 699 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 KLHL23Q8NBE8 558 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 CLP1Q92989 425 aaKnown RBP9.56□□□□□ -0.88
SNX27-201ENST00000368838 HPS3Q969F9 1004 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 CALR3Q96L12 384 aaKnown RBP9.56□□□□□ -0.88
SNX27-201ENST00000368838 IFT74Q96LB3 600 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 FGFBP2Q9BYJ0 223 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 TTYH3Q9C0H2 523 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 NDST4Q9H3R1 872 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 KIAA1586Q9HCI6 787 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 AGPAT3Q9NRZ7 376 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 PLAGL2Q9UPG8 496 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 HCN4Q9Y3Q4 1203 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 SMIM35A0A1B0GVV1 85 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 GPR37L1O60883 481 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 RPS6KA5O75582 802 aa9.56□□□□□ -0.88
SNX27-201ENST00000368838 PRPF6O94906 941 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms