RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 EYA4O95677 639 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 CLTBP09497 229 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 PRCPP42785 496 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 SLC12A3P55017 1021 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 KLHL10Q6JEL2 608 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 LLGL2Q6P1M3 1020 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 MIER3Q7Z3K6 550 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 GPBP1Q86WP2 473 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 DDX42Q86XP3 938 aaKnown RBP eCLIP9.62□□□□□ -0.87
TPM3-213ENST00000368545 SULF2Q8IWU5 870 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 CCDC65Q8IXS2 484 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 SYT2Q8N9I0 419 aaPredicted RBP9.62□□□□□ -0.87
TPM3-213ENST00000368545 RDM1Q8NG50 284 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 USP6NLQ92738 828 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 NINJ1Q92982 152 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 MFSD3Q96ES6 412 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 DHTKD1Q96HY7 919 aaPredicted RBP9.62□□□□□ -0.87
TPM3-213ENST00000368545 MPHOSPH6Q99547 160 aaKnown RBP9.62□□□□□ -0.87
TPM3-213ENST00000368545 PAGR1Q9BTK6 254 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 CLEC4MQ9H2X3 399 aaPredicted RBP9.62□□□□□ -0.87
TPM3-213ENST00000368545 ADD3Q9UEY8 706 aaKnown RBP9.62□□□□□ -0.87
TPM3-213ENST00000368545 ATP11BQ9Y2G3 1177 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 GDAQ9Y2T3 454 aa9.62□□□□□ -0.87
TPM3-213ENST00000368545 MROH7Q68CQ1 1323 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 J3QW42 95 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 CHMP2AO43633 222 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 ZNF18P17022 549 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 CYP11B2P19099 503 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 SFNP31947 248 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 JAK3P52333 1124 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 CCNA1P78396 465 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 KRT76Q01546 638 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 RPL6Q02878 288 aaKnown RBP9.61□□□□□ -0.87
TPM3-213ENST00000368545 CYP4A11Q02928 519 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 TPD52L1Q16890 204 aaPredicted RBP9.61□□□□□ -0.87
TPM3-213ENST00000368545 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.61□□□□□ -0.87
TPM3-213ENST00000368545 ANKRD13CQ8N6S4 541 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 SHCBP1Q8NEM2 672 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 CHAC2Q8WUX2 184 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 NELFBQ8WX92 580 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 BHMTQ93088 406 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 ZNF669Q96BR6 464 aaPredicted RBP9.61□□□□□ -0.87
TPM3-213ENST00000368545 MOV10L1Q9BXT6 1211 aaKnown RBP9.61□□□□□ -0.87
TPM3-213ENST00000368545 PBX4Q9BYU1 374 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 KCND2Q9NZV8 630 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 DHX15O43143 795 aaKnown RBP9.61□□□□□ -0.87
TPM3-213ENST00000368545 KIF20AO95235 890 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 SERPINC1P01008 464 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 IDEP14735 1019 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 RAG1P15918 1043 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 SPAG1Q07617 926 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 SPEM2Q0P670 501 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 STXBP2Q15833 593 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 DYMQ7RTS9 669 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 DRC7Q8IY82 874 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 UBR7Q8N806 425 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 DNAJC19Q96DA6 116 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 DYDC2Q96IM9 177 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 NACC1Q96RE7 527 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 CTAGE1Q96RT6 745 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 SLC30A3Q99726 388 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 MROH8Q9H579 483 aa9.61□□□□□ -0.87
TPM3-213ENST00000368545 ZNFX1Q9P2E3 1918 aaKnown RBP9.61□□□□□ -0.87
TPM3-213ENST00000368545 PLXNB2O15031 1838 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 MYH11P35749 1972 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 NFASCO94856 1347 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 FRMD3A2A2Y4 597 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 SLC15A5A6NIM6 579 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 SLITRK3O94933 977 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 KRT18P05783 430 aaKnown RBP9.6□□□□□ -0.87
TPM3-213ENST00000368545 GUCY2CP25092 1073 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 ALDH5A1P51649 535 aaPredicted RBP9.6□□□□□ -0.87
TPM3-213ENST00000368545 UBASH3AP57075 661 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 ERVK-24P63145 666 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 COASYQ13057 564 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 ITGB3BPQ13352 177 aaPredicted RBP9.6□□□□□ -0.87
TPM3-213ENST00000368545 ZNF423Q2M1K9 1284 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 CDKAL1Q5VV42 579 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 FOXR2Q6PJQ5 311 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 HFE2Q6ZVN8 426 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 TPH2Q8IWU9 490 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 SMAP1Q8IYB5 467 aaPredicted RBP9.6□□□□□ -0.87
TPM3-213ENST00000368545 GUF1Q8N442 669 aaKnown RBP9.6□□□□□ -0.87
TPM3-213ENST00000368545 ANKRD20A12PQ8NF67 263 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 GPRC5AQ8NFJ5 357 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 NOC3LQ8WTT2 800 aaKnown RBP9.6□□□□□ -0.87
TPM3-213ENST00000368545 FBXL18Q96ME1 805 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 MED15Q96RN5 788 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 POP1Q99575 1024 aaKnown RBP9.6□□□□□ -0.87
TPM3-213ENST00000368545 SENP7Q9BQF6 1050 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 LXNQ9BS40 222 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 PANK4Q9NVE7 773 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 SLC5A4Q9NY91 659 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 RGL1Q9NZL6 768 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 IFNKQ9P0W0 207 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 IMPACTQ9P2X3 320 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 RBPJLQ9UBG7 517 aa9.6□□□□□ -0.87
TPM3-213ENST00000368545 WDR64B1ANS9 1081 aa9.59□□□□□ -0.87
TPM3-213ENST00000368545 EIF3JO75822 258 aaKnown RBP9.59□□□□□ -0.87
TPM3-213ENST00000368545 HOXC6P09630 235 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms