RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 NAA25Q14CX7 972 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 TARBP2Q15633 366 aaKnown RBP11.45□□□□□ -0.58
TPM3-212ENST00000368533 KLHL7Q8IXQ5 586 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 DHX38Q92620 1227 aaKnown RBP11.45□□□□□ -0.58
TPM3-212ENST00000368533 ARL8AQ96BM9 186 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 MSTO1Q9BUK6 570 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 TMEM117Q9H0C3 514 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 NUCKS1Q9H1E3 243 aaKnown RBP11.45□□□□□ -0.58
TPM3-212ENST00000368533 SMARCAD1Q9H4L7 1026 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 TUT1Q9H6E5 874 aaKnown RBP11.45□□□□□ -0.58
TPM3-212ENST00000368533 ARHGAP28Q9P2N2 729 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 EXOC7Q9UPT5 735 aa11.45□□□□□ -0.58
TPM3-212ENST00000368533 SSU72P8A0A1W2PR75 194 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 SHOX2O60902 331 aaPredicted RBP11.44□□□□□ -0.58
TPM3-212ENST00000368533 MAPK4P31152 587 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 ARL2P36404 184 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 AARSP49588 968 aaKnown RBP eCLIP11.44□□□□□ -0.58
TPM3-212ENST00000368533 MXI1P50539 228 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 CDR1P51861 262 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 ZNF200P98182 395 aaPredicted RBP11.44□□□□□ -0.58
TPM3-212ENST00000368533 BIRC3Q13489 604 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 DRAP1Q14919 205 aaPredicted RBP11.44□□□□□ -0.58
TPM3-212ENST00000368533 HGSNATQ68CP4 663 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 TAS1R2Q8TE23 839 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 PSPC1Q8WXF1 523 aaKnown RBP11.44□□□□□ -0.58
TPM3-212ENST00000368533 CPB2Q96IY4 423 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 NIFKQ9BYG3 293 aaKnown RBP11.44□□□□□ -0.58
TPM3-212ENST00000368533 KATNBL1Q9H079 304 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 KLC4Q9NSK0 619 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 STIM2Q9P246 746 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.44□□□□□ -0.58
TPM3-212ENST00000368533 PTPRJQ12913 1337 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 CHUKO15111 745 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 MAFO75444 373 aaPredicted RBP11.44□□□□□ -0.58
TPM3-212ENST00000368533 IQCF3P0C7M6 154 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 GUCY2FP51841 1108 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 SEC24CP53992 1094 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 GUCY2DQ02846 1103 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 SF3A3Q12874 501 aaKnown RBP eCLIP11.44□□□□□ -0.58
TPM3-212ENST00000368533 EPC2Q52LR7 807 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 MMGT1Q8N4V1 131 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 KRT12Q99456 494 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 VIPAS39Q9H9C1 493 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 ERAP1Q9NZ08 941 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 DDX20Q9UHI6 824 aaKnown RBP11.44□□□□□ -0.58
TPM3-212ENST00000368533 AGO2Q9UKV8 859 aaKnown RBP11.44□□□□□ -0.58
TPM3-212ENST00000368533 GABRQQ9UN88 632 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 A0A087WZ62 844 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 MANSC4A6NHS7 340 aaPredicted RBP11.44□□□□□ -0.58
TPM3-212ENST00000368533 ZNF571Q7Z3V5 609 aaPredicted RBP11.44□□□□□ -0.58
TPM3-212ENST00000368533 TMEM192Q8IY95 271 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 FDXACB1Q9BRP7 624 aaPredicted RBP11.44□□□□□ -0.58
TPM3-212ENST00000368533 EDEM3Q9BZQ6 932 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 EPB41L5Q9HCM4 733 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 ZSWIM8A7E2V4 1837 aa11.44□□□□□ -0.58
TPM3-212ENST00000368533 UBE4BO95155 1302 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 LRRC37A2A6NM11 1700 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 FAM155AB1AL88 458 aaPredicted RBP11.43□□□□□ -0.58
TPM3-212ENST00000368533 KCNK3O14649 394 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 HSF2BPO75031 334 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 SLC10A3P09131 477 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 IFT88Q13099 833 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 MAP2K5Q13163 448 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 LAMC2Q13753 1193 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 KIZQ2M2Z5 673 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 CEP85LQ5SZL2 805 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 ARMC3Q5W041 872 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 DPY19L2P1Q6NXN4 242 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 INTS8Q75QN2 995 aaKnown RBP11.43□□□□□ -0.58
TPM3-212ENST00000368533 TATDN2Q93075 761 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 DIS3Q9Y2L1 958 aaKnown RBP11.43□□□□□ -0.58
TPM3-212ENST00000368533 LOXHD1Q8IVV2 1947 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 ZSCAN5CA6NGD5 496 aaPredicted RBP11.43□□□□□ -0.58
TPM3-212ENST00000368533 FOXN3O00409 490 aaPredicted RBP11.43□□□□□ -0.58
TPM3-212ENST00000368533 HEXIM1O94992 359 aaKnown RBP11.43□□□□□ -0.58
TPM3-212ENST00000368533 MYL3P08590 195 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 GUCY1A3Q02108 690 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 PPFIA1Q13136 1202 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 HLTFQ14527 1009 aaKnown RBP eCLIP11.43□□□□□ -0.58
TPM3-212ENST00000368533 SLC18A3Q16572 532 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 EEF1DP3Q658K8 133 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 GPD1LQ8N335 351 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 RNF10Q8N5U6 811 aaKnown RBP11.43□□□□□ -0.58
TPM3-212ENST00000368533 SPIRE2Q8WWL2 714 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 TRIM6Q9C030 488 aaPredicted RBP11.43□□□□□ -0.58
TPM3-212ENST00000368533 ABHD16BQ9H3Z7 469 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 VTA1Q9NP79 307 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 NFU1Q9UMS0 254 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 KAT6AQ92794 2004 aa11.43□□□□□ -0.58
TPM3-212ENST00000368533 KIF3CO14782 793 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 PGK1P00558 417 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 PRKCBP05771 671 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 ABCB4P21439 1286 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 NAMPTP43490 491 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 PSMC4P43686 418 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 ASTE1Q2TB18 679 aaPredicted RBP11.42□□□□□ -0.58
TPM3-212ENST00000368533 PREPLQ4J6C6 727 aaPredicted RBP11.42□□□□□ -0.58
TPM3-212ENST00000368533 PHLDB2Q86SQ0 1253 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 TLK2Q86UE8 772 aa11.42□□□□□ -0.58
TPM3-212ENST00000368533 PALB2Q86YC2 1186 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms