RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 RSPO2Q6UXX9 243 aaPredicted RBP17.59■□□□□ 0.41
CKS1B-202ENST00000368436 C1orf186Q6ZWK4 172 aa17.59■□□□□ 0.41
CKS1B-202ENST00000368436 RTL10Q7L3V2 364 aa17.59■□□□□ 0.41
CKS1B-202ENST00000368436 TAS1R3Q7RTX0 852 aa17.59■□□□□ 0.41
CKS1B-202ENST00000368436 CEP120Q8N960 986 aa17.59■□□□□ 0.41
CKS1B-202ENST00000368436 GPR152Q8TDT2 470 aa17.59■□□□□ 0.41
CKS1B-202ENST00000368436 C17orf75Q9HAS0 396 aa17.59■□□□□ 0.41
CKS1B-202ENST00000368436 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.59■□□□□ 0.41
CKS1B-202ENST00000368436 CA14Q9ULX7 337 aa17.59■□□□□ 0.41
CKS1B-202ENST00000368436 RBM19Q9Y4C8 960 aaKnown RBP17.59■□□□□ 0.41
CKS1B-202ENST00000368436 TRAPPC3O43617 180 aa17.58■□□□□ 0.4
CKS1B-202ENST00000368436 HIP1RO75146 1068 aa17.58■□□□□ 0.4
CKS1B-202ENST00000368436 PROZP22891 400 aa17.58■□□□□ 0.4
CKS1B-202ENST00000368436 SOX4Q06945 474 aaPredicted RBP17.58■□□□□ 0.4
CKS1B-202ENST00000368436 MAPK7Q13164 816 aa17.58■□□□□ 0.4
CKS1B-202ENST00000368436 ANGPT1Q15389 498 aa17.58■□□□□ 0.4
CKS1B-202ENST00000368436 AXDND1Q5T1B0 1012 aaPredicted RBP17.58■□□□□ 0.4
CKS1B-202ENST00000368436 RINT1Q6NUQ1 792 aa17.58■□□□□ 0.4
CKS1B-202ENST00000368436 DTHD1Q6ZMT9 781 aa17.58■□□□□ 0.4
CKS1B-202ENST00000368436 FRMD5Q7Z6J6 570 aa17.58■□□□□ 0.4
CKS1B-202ENST00000368436 C3orf58Q8NDZ4 430 aa17.58■□□□□ 0.4
CKS1B-202ENST00000368436 SLC7A14Q8TBB6 771 aa17.58■□□□□ 0.4
CKS1B-202ENST00000368436 DDX27Q96GQ7 796 aaKnown RBP17.58■□□□□ 0.4
CKS1B-202ENST00000368436 DRC1Q96MC2 740 aa17.58■□□□□ 0.4
CKS1B-202ENST00000368436 NTPCRQ9BSD7 190 aaKnown RBP17.58■□□□□ 0.4
CKS1B-202ENST00000368436 MMTAG2Q9BU76 263 aaKnown RBP17.58■□□□□ 0.4
CKS1B-202ENST00000368436 RPP25Q9BUL9 199 aaKnown RBP17.58■□□□□ 0.4
CKS1B-202ENST00000368436 RUSC1Q9BVN2 902 aa17.58■□□□□ 0.4
CKS1B-202ENST00000368436 CCDC94Q9BW85 323 aaPredicted RBP17.58■□□□□ 0.4
CKS1B-202ENST00000368436 MRPL4Q9BYD3 311 aaKnown RBP17.58■□□□□ 0.4
CKS1B-202ENST00000368436 GOLGA2P5Q9HBQ8 144 aa17.58■□□□□ 0.4
CKS1B-202ENST00000368436 KMT5AQ9NQR1 393 aa17.58■□□□□ 0.4
CKS1B-202ENST00000368436 TOPORSQ9NS56 1045 aaPredicted RBP17.58■□□□□ 0.4
CKS1B-202ENST00000368436 STK25O00506 426 aa17.57■□□□□ 0.4
CKS1B-202ENST00000368436 ABLIM1O14639 778 aa17.57■□□□□ 0.4
CKS1B-202ENST00000368436 CCL16O15467 120 aa17.57■□□□□ 0.4
CKS1B-202ENST00000368436 XYLBO75191 536 aa17.57■□□□□ 0.4
CKS1B-202ENST00000368436 MCF2P10911 925 aa17.57■□□□□ 0.4
CKS1B-202ENST00000368436 TKTP29401 623 aaKnown RBP17.57■□□□□ 0.4
CKS1B-202ENST00000368436 CDC25AP30304 524 aa17.57■□□□□ 0.4
CKS1B-202ENST00000368436 YARSP54577 528 aaKnown RBP17.57■□□□□ 0.4
CKS1B-202ENST00000368436 DMP1Q13316 513 aaPredicted RBP17.57■□□□□ 0.4
CKS1B-202ENST00000368436 ZNF568Q3ZCX4 644 aa17.57■□□□□ 0.4
CKS1B-202ENST00000368436 PARM1Q6UWI2 310 aa17.57■□□□□ 0.4
CKS1B-202ENST00000368436 ANKS3Q6ZW76 656 aa17.57■□□□□ 0.4
CKS1B-202ENST00000368436 KCNK18Q7Z418 384 aa17.57■□□□□ 0.4
CKS1B-202ENST00000368436 FGF13Q92913 245 aa17.57■□□□□ 0.4
CKS1B-202ENST00000368436 FGF14Q92915 247 aa17.57■□□□□ 0.4
CKS1B-202ENST00000368436 NKD2Q969F2 451 aaPredicted RBP17.57■□□□□ 0.4
CKS1B-202ENST00000368436 ZMAT2Q96NC0 199 aaKnown RBP17.57■□□□□ 0.4
CKS1B-202ENST00000368436 TARS2Q9BW92 718 aaKnown RBP17.57■□□□□ 0.4
CKS1B-202ENST00000368436 TBC1D17Q9HA65 648 aa17.57■□□□□ 0.4
CKS1B-202ENST00000368436 ARHGEF3Q9NR81 526 aa17.57■□□□□ 0.4
CKS1B-202ENST00000368436 CDY1Q9Y6F8 540 aa17.57■□□□□ 0.4
CKS1B-202ENST00000368436 I3L4J1 428 aa17.56■□□□□ 0.4
CKS1B-202ENST00000368436 KCNE1P15382 129 aa17.56■□□□□ 0.4
CKS1B-202ENST00000368436 BRCC3P46736 316 aa17.56■□□□□ 0.4
CKS1B-202ENST00000368436 OSTNP61366 133 aa17.56■□□□□ 0.4
CKS1B-202ENST00000368436 C8orf34Q49A92 452 aa17.56■□□□□ 0.4
CKS1B-202ENST00000368436 HYIQ5T013 277 aa17.56■□□□□ 0.4
CKS1B-202ENST00000368436 MTSS1LQ765P7 747 aa17.56■□□□□ 0.4
CKS1B-202ENST00000368436 KCTD17Q8N5Z5 321 aa17.56■□□□□ 0.4
CKS1B-202ENST00000368436 ST13P5Q8NFI4 369 aaPredicted RBP17.56■□□□□ 0.4
CKS1B-202ENST00000368436 ITFG1Q8TB96 612 aa17.56■□□□□ 0.4
CKS1B-202ENST00000368436 SNX27Q96L92 541 aa17.56■□□□□ 0.4
CKS1B-202ENST00000368436 TIPINQ9BVW5 301 aa17.56■□□□□ 0.4
CKS1B-202ENST00000368436 SLC38A7Q9NVC3 462 aa17.56■□□□□ 0.4
CKS1B-202ENST00000368436 DLGAP2Q9P1A6 1054 aa17.56■□□□□ 0.4
CKS1B-202ENST00000368436 DNMT3BQ9UBC3 853 aaKnown RBP17.56■□□□□ 0.4
CKS1B-202ENST00000368436 KCNH3Q9ULD8 1083 aa17.56■□□□□ 0.4
CKS1B-202ENST00000368436 DMDP11532 3685 aa17.56■□□□□ 0.4
CKS1B-202ENST00000368436 MEFVO15553 781 aaPredicted RBP17.55■□□□□ 0.4
CKS1B-202ENST00000368436 GUCY2CP25092 1073 aa17.55■□□□□ 0.4
CKS1B-202ENST00000368436 STARD6P59095 220 aa17.55■□□□□ 0.4
CKS1B-202ENST00000368436 GPC5P78333 572 aa17.55■□□□□ 0.4
CKS1B-202ENST00000368436 ATP2C1P98194 919 aaPredicted RBP17.55■□□□□ 0.4
CKS1B-202ENST00000368436 RILPL1Q5EBL4 403 aa17.55■□□□□ 0.4
CKS1B-202ENST00000368436 SLC8B1Q6J4K2 584 aa17.55■□□□□ 0.4
CKS1B-202ENST00000368436 MPZL3Q6UWV2 235 aa17.55■□□□□ 0.4
CKS1B-202ENST00000368436 SPIRE2Q8WWL2 714 aa17.55■□□□□ 0.4
CKS1B-202ENST00000368436 ACAP3Q96P50 834 aa17.55■□□□□ 0.4
CKS1B-202ENST00000368436 HCFC1R1Q9NWW0 138 aa17.55■□□□□ 0.4
CKS1B-202ENST00000368436 CNTN3Q9P232 1028 aa17.55■□□□□ 0.4
CKS1B-202ENST00000368436 KCNG1Q9UIX4 513 aa17.55■□□□□ 0.4
CKS1B-202ENST00000368436 POLIQ9UNA4 740 aa17.55■□□□□ 0.4
CKS1B-202ENST00000368436 SIT1Q9Y3P8 196 aa17.55■□□□□ 0.4
CKS1B-202ENST00000368436 MIA3Q5JRA6 1907 aa17.55■□□□□ 0.4
CKS1B-202ENST00000368436 SFI1A8K8P3 1242 aa17.54■□□□□ 0.4
CKS1B-202ENST00000368436 PODXLO00592 558 aa17.54■□□□□ 0.4
CKS1B-202ENST00000368436 SLC16A4O15374 487 aa17.54■□□□□ 0.4
CKS1B-202ENST00000368436 TBC1D4O60343 1298 aa17.54■□□□□ 0.4
CKS1B-202ENST00000368436 ABLIM3O94929 683 aa17.54■□□□□ 0.4
CKS1B-202ENST00000368436 RFX1P22670 979 aa17.54■□□□□ 0.4
CKS1B-202ENST00000368436 RPL9P32969 192 aaKnown RBP17.54■□□□□ 0.4
CKS1B-202ENST00000368436 MRPL58Q14197 206 aaKnown RBP17.54■□□□□ 0.4
CKS1B-202ENST00000368436 PABPC1LQ4VXU2 614 aaKnown RBP17.54■□□□□ 0.4
CKS1B-202ENST00000368436 VARS2Q5ST30 1063 aaKnown RBP17.54■□□□□ 0.4
CKS1B-202ENST00000368436 ZNF461Q8TAF7 563 aa17.54■□□□□ 0.4
CKS1B-202ENST00000368436 PNMA5Q96PV4 448 aa17.54■□□□□ 0.4
CKS1B-202ENST00000368436 TCHPQ9BT92 498 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms