RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 R3HDMLQ9H3Y0 253 aa15.04■□□□□ -0
USF1-202ENST00000368020 GOLPH3Q9H4A6 298 aa15.04■□□□□ -0
USF1-202ENST00000368020 TAS2R14Q9NYV8 317 aa15.04■□□□□ -0
USF1-202ENST00000368020 GSTTP1A0A1W2PQM5 241 aa15.03■□□□□ -0
USF1-202ENST00000368020 SOWAHBA6NEL2 793 aa15.03■□□□□ -0
USF1-202ENST00000368020 ADCY3O60266 1144 aa15.03■□□□□ -0
USF1-202ENST00000368020 CHRNB2P17787 502 aa15.03■□□□□ -0
USF1-202ENST00000368020 TNNI1P19237 187 aa15.03■□□□□ -0
USF1-202ENST00000368020 GBP1P32455 592 aa15.03■□□□□ -0
USF1-202ENST00000368020 GGCXP38435 758 aa15.03■□□□□ -0
USF1-202ENST00000368020 PIK3CAP42336 1068 aa15.03■□□□□ -0
USF1-202ENST00000368020 SOX10P56693 466 aa15.03■□□□□ -0
USF1-202ENST00000368020 HTRA3P83110 453 aa15.03■□□□□ -0
USF1-202ENST00000368020 FMO1Q01740 532 aa15.03■□□□□ -0
USF1-202ENST00000368020 SURF1Q15526 300 aa15.03■□□□□ -0
USF1-202ENST00000368020 ACAD10Q6JQN1 1059 aa15.03■□□□□ -0
USF1-202ENST00000368020 PLPPR4Q7Z2D5 763 aa15.03■□□□□ -0
USF1-202ENST00000368020 GPR142Q7Z601 462 aa15.03■□□□□ -0
USF1-202ENST00000368020 PLEKHH3Q7Z736 793 aa15.03■□□□□ -0
USF1-202ENST00000368020 SLC47A2Q86VL8 602 aa15.03■□□□□ -0
USF1-202ENST00000368020 PALB2Q86YC2 1186 aa15.03■□□□□ -0
USF1-202ENST00000368020 EFCAB13Q8IY85 973 aa15.03■□□□□ -0
USF1-202ENST00000368020 TMEM143Q96AN5 459 aa15.03■□□□□ -0
USF1-202ENST00000368020 CEP89Q96ST8 783 aa15.03■□□□□ -0
USF1-202ENST00000368020 MSTO1Q9BUK6 570 aa15.03■□□□□ -0
USF1-202ENST00000368020 FAM114A2Q9NRY5 505 aa15.03■□□□□ -0
USF1-202ENST00000368020 RBAKQ9NYW8 714 aaPredicted RBP15.03■□□□□ -0
USF1-202ENST00000368020 UTP11Q9Y3A2 253 aaKnown RBP15.03■□□□□ -0
USF1-202ENST00000368020 ALG6Q9Y672 507 aa15.03■□□□□ -0
USF1-202ENST00000368020 A0A0B4J269 797 aa15.03■□□□□ -0
USF1-202ENST00000368020 SLC15A5A6NIM6 579 aa15.03■□□□□ -0
USF1-202ENST00000368020 LGR5O75473 907 aa15.03■□□□□ -0
USF1-202ENST00000368020 FGGP02679 453 aa15.03■□□□□ -0
USF1-202ENST00000368020 TCF7P36402 384 aaPredicted RBP15.03■□□□□ -0
USF1-202ENST00000368020 PTENP60484 403 aa15.03■□□□□ -0
USF1-202ENST00000368020 DHX34Q14147 1143 aaKnown RBP15.03■□□□□ -0
USF1-202ENST00000368020 GRB14Q14449 540 aa15.03■□□□□ -0
USF1-202ENST00000368020 SEL1L2Q5TEA6 688 aa15.03■□□□□ -0
USF1-202ENST00000368020 WDR78Q5VTH9 848 aa15.03■□□□□ -0
USF1-202ENST00000368020 TAF3Q5VWG9 929 aa15.03■□□□□ -0
USF1-202ENST00000368020 ZBTB8OSQ8IWT0 167 aa15.03■□□□□ -0
USF1-202ENST00000368020 ASAP3Q8TDY4 903 aa15.03■□□□□ -0
USF1-202ENST00000368020 POP1Q99575 1024 aaKnown RBP15.03■□□□□ -0
USF1-202ENST00000368020 CGRRF1Q99675 332 aa15.03■□□□□ -0
USF1-202ENST00000368020 SH3GL2Q99962 352 aa15.03■□□□□ -0
USF1-202ENST00000368020 IMPG2Q9BZV3 1241 aa15.03■□□□□ -0
USF1-202ENST00000368020 RASAL2Q9UJF2 1139 aa15.03■□□□□ -0
USF1-202ENST00000368020 NFU1Q9UMS0 254 aa15.03■□□□□ -0
USF1-202ENST00000368020 FAM187AA6NFU0 413 aa15.02□□□□□ -0.01
USF1-202ENST00000368020 BHMG1C9JSJ3 638 aaPredicted RBP15.02□□□□□ -0.01
USF1-202ENST00000368020 NOP56O00567 594 aaKnown RBP15.02□□□□□ -0.01
USF1-202ENST00000368020 C4BPAP04003 597 aaKnown RBP15.02□□□□□ -0.01
USF1-202ENST00000368020 MMEP08473 750 aa15.02□□□□□ -0.01
USF1-202ENST00000368020 KRT5P13647 590 aa15.02□□□□□ -0.01
USF1-202ENST00000368020 CARSP49589 748 aaKnown RBP15.02□□□□□ -0.01
USF1-202ENST00000368020 RNASE9P60153 205 aaKnown RBP15.02□□□□□ -0.01
USF1-202ENST00000368020 MTMR3Q13615 1198 aa15.02□□□□□ -0.01
USF1-202ENST00000368020 DNAAF5Q86Y56 855 aa15.02□□□□□ -0.01
USF1-202ENST00000368020 C1orf131Q8NDD1 294 aaKnown RBP15.02□□□□□ -0.01
USF1-202ENST00000368020 ZNF564Q8TBZ8 553 aaPredicted RBP15.02□□□□□ -0.01
USF1-202ENST00000368020 CASKIN2Q8WXE0 1202 aa15.02□□□□□ -0.01
USF1-202ENST00000368020 IFT81Q8WYA0 676 aa15.02□□□□□ -0.01
USF1-202ENST00000368020 SEC14L1Q92503 715 aa15.02□□□□□ -0.01
USF1-202ENST00000368020 KAT5Q92993 513 aa15.02□□□□□ -0.01
USF1-202ENST00000368020 ZNF653Q96CK0 615 aa15.02□□□□□ -0.01
USF1-202ENST00000368020 ZSWIM1Q9BR11 485 aa15.02□□□□□ -0.01
USF1-202ENST00000368020 MRPL4Q9BYD3 311 aaKnown RBP15.02□□□□□ -0.01
USF1-202ENST00000368020 FAM204AQ9H8W3 233 aa15.02□□□□□ -0.01
USF1-202ENST00000368020 AVENQ9NQS1 362 aaPredicted RBP15.02□□□□□ -0.01
USF1-202ENST00000368020 TOPORSQ9NS56 1045 aaPredicted RBP15.02□□□□□ -0.01
USF1-202ENST00000368020 RNF186Q9NXI6 227 aa15.02□□□□□ -0.01
USF1-202ENST00000368020 SAGE1Q9NXZ1 904 aa15.02□□□□□ -0.01
USF1-202ENST00000368020 COG5Q9UP83 839 aa15.02□□□□□ -0.01
USF1-202ENST00000368020 PLXNB2O15031 1838 aa15.02□□□□□ -0.01
USF1-202ENST00000368020 ZNF236Q9UL36 1845 aa15.02□□□□□ -0.01
USF1-202ENST00000368020 GOLGA6CA6NDK9 693 aa15.01□□□□□ -0.01
USF1-202ENST00000368020 HLA-DRAP01903 254 aa15.01□□□□□ -0.01
USF1-202ENST00000368020 GOLGA6DP0CG33 693 aa15.01□□□□□ -0.01
USF1-202ENST00000368020 CTNNA2P26232 953 aa15.01□□□□□ -0.01
USF1-202ENST00000368020 ADORA2AP29274 412 aa15.01□□□□□ -0.01
USF1-202ENST00000368020 BIRC3Q13489 604 aa15.01□□□□□ -0.01
USF1-202ENST00000368020 CLEC16AQ2KHT3 1053 aa15.01□□□□□ -0.01
USF1-202ENST00000368020 CFAP58Q5T655 872 aa15.01□□□□□ -0.01
USF1-202ENST00000368020 CDCA2Q69YH5 1023 aaPredicted RBP15.01□□□□□ -0.01
USF1-202ENST00000368020 LEKR1Q6ZMV7 388 aa15.01□□□□□ -0.01
USF1-202ENST00000368020 ZNF467Q7Z7K2 595 aaPredicted RBP15.01□□□□□ -0.01
USF1-202ENST00000368020 CD302Q8IX05 232 aa15.01□□□□□ -0.01
USF1-202ENST00000368020 FAM76AQ8TAV0 307 aa15.01□□□□□ -0.01
USF1-202ENST00000368020 DDX1Q92499 740 aaKnown RBP15.01□□□□□ -0.01
USF1-202ENST00000368020 PCDHB18PQ96TA0 734 aa15.01□□□□□ -0.01
USF1-202ENST00000368020 PCYT2Q99447 389 aa15.01□□□□□ -0.01
USF1-202ENST00000368020 NUP85Q9BW27 656 aa15.01□□□□□ -0.01
USF1-202ENST00000368020 SLC5A4Q9NY91 659 aa15.01□□□□□ -0.01
USF1-202ENST00000368020 GOLGA6AQ9NYA3 693 aa15.01□□□□□ -0.01
USF1-202ENST00000368020 LCMT1Q9UIC8 334 aa15.01□□□□□ -0.01
USF1-202ENST00000368020 ASB14A6NK59 587 aa15□□□□□ -0.01
USF1-202ENST00000368020 AGPSO00116 658 aa15□□□□□ -0.01
USF1-202ENST00000368020 CLDN3O15551 220 aa15□□□□□ -0.01
USF1-202ENST00000368020 TOM1L1O75674 476 aa15□□□□□ -0.01
USF1-202ENST00000368020 ERLIN2O94905 339 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms