RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 ZNF568Q3ZCX4 644 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 OSBPL5Q9H0X9 879 aaPredicted RBP13.05□□□□□ -0.32
TPR-201ENST00000367478 RPAP3Q9H6T3 665 aaPredicted RBP13.05□□□□□ -0.32
TPR-201ENST00000367478 UBA2Q9UBT2 640 aaPredicted RBP13.05□□□□□ -0.32
TPR-201ENST00000367478 CTNNAL1Q9UBT7 734 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 STAT3P40763 770 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 NCAPHQ15003 741 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 USP39Q53GS9 565 aaKnown RBP13.05□□□□□ -0.32
TPR-201ENST00000367478 LONP2Q86WA8 852 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 LRRC49Q8IUZ0 686 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 ARL8AQ96BM9 186 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 USP1O94782 785 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 MICALL2Q8IY33 904 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 FAR2Q96K12 515 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 NPHS2Q9NP85 383 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 A0A1W2PQC6 194 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 MRPS25P82663 173 aaKnown RBP13.05□□□□□ -0.32
TPR-201ENST00000367478 PHKG1Q16816 387 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 IL17RAQ96F46 866 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 WDR35Q9P2L0 1181 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 NDUFS3O75489 264 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 KNOP1Q1ED39 458 aaKnown RBP13.05□□□□□ -0.32
TPR-201ENST00000367478 POTEEQ6S8J3 1075 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 EAF2Q96CJ1 260 aaPredicted RBP13.05□□□□□ -0.32
TPR-201ENST00000367478 TNIP3Q96KP6 325 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 THTPAQ9BU02 230 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 ROPN1BQ9BZX4 212 aaPredicted RBP13.05□□□□□ -0.32
TPR-201ENST00000367478 ROPN1Q9HAT0 212 aaPredicted RBP13.05□□□□□ -0.32
TPR-201ENST00000367478 PVALEFA0A1B0GWK0 134 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.05□□□□□ -0.32
TPR-201ENST00000367478 MTSS1O43312 755 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 STX5Q13190 355 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 CRYMQ14894 314 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 DUOXA2Q1HG44 320 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 UGT3A1Q6NUS8 523 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 TRIM65Q6PJ69 517 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 SCN4BQ8IWT1 228 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 C3orf20Q8ND61 904 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 HEMGNQ9BXL5 484 aa13.05□□□□□ -0.32
TPR-201ENST00000367478 C20orf96Q9NUD7 363 aaPredicted RBP13.05□□□□□ -0.32
TPR-201ENST00000367478 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.05□□□□□ -0.32
TPR-201ENST00000367478 LRRC53A6NM62 1247 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 CEBPAP49715 358 aaPredicted RBP13.04□□□□□ -0.32
TPR-201ENST00000367478 SGSM1Q2NKQ1 1148 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 STX7O15400 261 aaKnown RBP13.04□□□□□ -0.32
TPR-201ENST00000367478 RTN2O75298 545 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 FTLP02792 175 aaPredicted RBP13.04□□□□□ -0.32
TPR-201ENST00000367478 ITIH2P19823 946 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 KCNK10P57789 538 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 CDC42EP1Q00587 391 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 LCORLQ8N3X6 602 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 TIPINQ9BVW5 301 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 SMIM31A0A1B0GVY4 71 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 EIF3HO15372 352 aaKnown RBP eCLIP13.04□□□□□ -0.327e-7■□□□□ 10.7
TPR-201ENST00000367478 RRM2P31350 389 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 KRT20P35900 424 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 SCNN1DP51172 638 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 STILQ15468 1287 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 SPICE1Q8N0Z3 855 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 MAGEA13PA6NCF6 341 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 SHCBP1Q8NEM2 672 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 CCDC126Q96EE4 140 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 CYFIP2Q96F07 1278 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 FHDC1Q9C0D6 1143 aaPredicted RBP13.04□□□□□ -0.32
TPR-201ENST00000367478 ENOPH1Q9UHY7 261 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 ALDH1A1P00352 501 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 S100A9P06702 114 aaKnown RBP13.04□□□□□ -0.32
TPR-201ENST00000367478 KRT17Q04695 432 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 TAB1Q15750 504 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 ACCSLQ4AC99 568 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 PTPRN2Q92932 1015 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 ZNF560Q96MR9 790 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 CCT8L2Q96SF2 557 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 MLXIPLQ9NP71 852 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 UTP6Q9NYH9 597 aaKnown RBP13.04□□□□□ -0.32
TPR-201ENST00000367478 AFF4Q9UHB7 1163 aaKnown RBP13.04□□□□□ -0.32
TPR-201ENST00000367478 DENND3A2RUS2 1198 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 ADD2P35612 726 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 FNTAP49354 379 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 KRT76Q01546 638 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 PIGHQ14442 188 aaPredicted RBP13.04□□□□□ -0.32
TPR-201ENST00000367478 TRIP10Q15642 601 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 TWF2Q6IBS0 349 aaKnown RBP13.04□□□□□ -0.32
TPR-201ENST00000367478 CARD14Q9BXL6 1004 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 SPRTNQ9H040 489 aaPredicted RBP13.04□□□□□ -0.32
TPR-201ENST00000367478 BHMT2Q9H2M3 363 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 CDH6P55285 790 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 ZNF200P98182 395 aaPredicted RBP13.04□□□□□ -0.32
TPR-201ENST00000367478 MTMR1Q13613 665 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 KLHL12Q53G59 568 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 TTC39BQ5VTQ0 682 aaPredicted RBP13.04□□□□□ -0.32
TPR-201ENST00000367478 SRLQ86TD4 932 aa13.04□□□□□ -0.32
TPR-201ENST00000367478 RMND5BQ96G75 393 aaPredicted RBP13.04□□□□□ -0.32
TPR-201ENST00000367478 BBOX1O75936 387 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 EIF3EP60228 445 aaKnown RBP13.03□□□□□ -0.32
TPR-201ENST00000367478 FAM102AQ5T9C2 384 aaPredicted RBP13.03□□□□□ -0.32
TPR-201ENST00000367478 ARMC3Q5W041 872 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 ARHGEF26Q96DR7 871 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 OSBPL8Q9BZF1 889 aa13.03□□□□□ -0.32
TPR-201ENST00000367478 ZC3H7BQ9UGR2 993 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms