RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 ANKMY2Q8IV38 441 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 OSBPL8Q9BZF1 889 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 GJB4Q9NTQ9 266 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 CYP2E1P05181 493 aaPredicted RBP11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 MAN2A1Q16706 1144 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 ARHGAP27Q6ZUM4 889 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 PBXIP1Q96AQ6 731 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 DDX50Q9BQ39 737 aaKnown RBP11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 LRRIQ1Q96JM4 1722 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 QKIQ96PU8 341 aaKnown RBP eCLIP11.63□□□□□ -0.551e-11■■■■■ 59.5
CDC42BPA-205ENST00000366769 PSMD14O00487 310 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 NR5A1Q13285 461 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 SYCP2LQ5T4T6 812 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 TRIM63Q969Q1 353 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 NMRK1Q9NWW6 199 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 ZNF233A6NK53 670 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 MMP14P50281 582 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 CACNB1Q02641 598 aaPredicted RBP11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 PPP1R15BQ5SWA1 713 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 PPP1R14AQ96A00 147 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 AGBL1Q96MI9 1066 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 MRPL40Q9NQ50 206 aaKnown RBP11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 GSNP06396 782 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 CD58P19256 250 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 NAA20P61599 178 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 ZNF555Q8NEP9 628 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 LINS1Q8NG48 757 aa11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 TRIM45Q9H8W5 580 aaPredicted RBP11.63□□□□□ -0.55
CDC42BPA-205ENST00000366769 CCT3P49368 545 aaKnown RBP11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 RAB27AP51159 221 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 SEL1LQ9UBV2 794 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 SPDYE5A6NIY4 337 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 KPNA4O00629 521 aaPredicted RBP11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 BCL10O95999 233 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 BYSLQ13895 437 aaKnown RBP11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 TERB1Q8NA31 727 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 RMND5BQ96G75 393 aaPredicted RBP11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 ZFP42Q96MM3 310 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 NT5C1BQ96P26 610 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 CELF4Q9BZC1 486 aaKnown RBP11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 MRPL11Q9Y3B7 192 aaKnown RBP11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 ZBED1O96006 694 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 AARSP49588 968 aaKnown RBP eCLIP11.62□□□□□ -0.553e-6■□□□□ 8.7
CDC42BPA-205ENST00000366769 EFTUD2Q15029 972 aaKnown RBP eCLIP11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 SLFN12Q8IYM2 578 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 NDUFAF2Q8N183 169 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 GOLPH3Q9H4A6 298 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 COL4A3BPQ9Y5P4 624 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 ATXN2Q99700 1313 aaKnown RBP11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 IL10P22301 178 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 ODR4Q5SWX8 454 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 KCNB2Q92953 911 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 ZNF274Q96GC6 653 aaPredicted RBP11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 HEXIM2Q96MH2 286 aaKnown RBP11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 BIVM-ERCC5R4GMW8 1640 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 NOTOA8MTQ0 251 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 PLCH2O75038 1416 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 HSPA1AP0DMV8 641 aaKnown RBP11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 HSPA1BP0DMV9 641 aaKnown RBP11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 CHN2P52757 468 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 DNAL1Q4LDG9 190 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 ELOA2Q8IYF1 753 aaPredicted RBP11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 RBM41Q96IZ5 413 aaKnown RBP11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 CARD14Q9BXL6 1004 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 ACEP12821 1306 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 A0A1B0GW55 424 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 DUX4L2P0CJ85 424 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 DUX4L3P0CJ86 424 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 DUX4L4P0CJ87 422 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 DUX4L5P0CJ88 424 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 DUX4L6P0CJ89 424 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 DUX4L7P0CJ90 424 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 TEDDM1Q5T9Z0 273 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 NEK8Q86SG6 692 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 DCLRE1BQ9H816 532 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 RXFP1Q9HBX9 757 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 DUX4Q9UBX2 424 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 ADAMTS1Q9UHI8 967 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 RPS6KA5O75582 802 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 FBXO31Q5XUX0 539 aaPredicted RBP11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 TC2NQ8N9U0 490 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 VPS50Q96JG6 964 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 DNAJC7Q99615 494 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 TMBIM4Q9HC24 238 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 FGFR3P22607 806 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 DCAF4L1Q3SXM0 396 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 CHMP1BQ7LBR1 199 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 METTL16Q86W50 562 aaKnown RBP11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 APPBP2Q92624 585 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 SERPIND1P05546 499 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 PPARGP37231 505 aaPredicted RBP11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 CLVS1Q8IUQ0 354 aaPredicted RBP11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 CHP1Q99653 195 aa11.62□□□□□ -0.55
CDC42BPA-205ENST00000366769 INPP5AQ14642 412 aa11.61□□□□□ -0.55
CDC42BPA-205ENST00000366769 FASTKD5Q7L8L6 764 aaKnown RBP11.61□□□□□ -0.55
CDC42BPA-205ENST00000366769 PNMA3Q9UL41 463 aa11.61□□□□□ -0.55
CDC42BPA-205ENST00000366769 IFI30P13284 250 aa11.61□□□□□ -0.55
CDC42BPA-205ENST00000366769 NR2F2P24468 414 aa11.61□□□□□ -0.55
CDC42BPA-205ENST00000366769 KPNA1P52294 538 aaPredicted RBP11.61□□□□□ -0.55
CDC42BPA-205ENST00000366769 STXBP2Q15833 593 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms