RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 ACTRT2Q8TDY3 377 aa3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 TGFBRAP1Q8WUH2 860 aa3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 TTC1Q99614 292 aa3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 ACE2Q9BYF1 805 aaPredicted RBP3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 LDAHQ9H6V9 325 aa3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 WDR26Q9H7D7 661 aa3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 ALG13Q9NP73 1137 aaKnown RBP3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 DMRT3Q9NQL9 472 aa3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 LANCL2Q9NS86 450 aa3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 LRIT1Q9P2V4 623 aa3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 USP25Q9UHP3 1055 aa3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 ZBTB21Q9ULJ3 1066 aa3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 APOBEC2Q9Y235 224 aaKnown RBP3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 SIK3Q9Y2K2 1263 aa3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 FRMD4BQ9Y2L6 1034 aa3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 AATKQ6ZMQ8 1374 aa3.37□□□□□ -1.87
RNU4-42P-201ENST00000364738 INO80B-WBP1J3KQ70 363 aa3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 MGST3O14880 152 aa3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 ZEB2O60315 1214 aa3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 GPANK1O95872 356 aa3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 POMCP01189 267 aa3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 IGLV2-14P01704 120 aa3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 MTHFD2P13995 350 aa3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 GCSHP23434 173 aa3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 SLC6A2P23975 617 aa3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 GUCY1A2P33402 732 aa3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 STRN3Q13033 797 aa3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 TAF7LQ5H9L4 462 aa3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 MUM1L1Q5H9M0 696 aa3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 ZNF362Q5T0B9 420 aaPredicted RBP3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 ZNF529Q6P280 563 aa3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 FOXR2Q6PJQ5 311 aa3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 GLCCI1Q86VQ1 547 aa3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 FAM43AQ8N2R8 423 aa3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 STON2Q8WXE9 905 aa3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 FATE1Q969F0 183 aa3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 FUBP1Q96AE4 644 aaKnown RBP3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 BOD1Q96IK1 185 aa3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 AIFM2Q9BRQ8 373 aa3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 INO80BQ9C086 356 aaPredicted RBP3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 GREM2Q9H772 168 aa3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 IFT122Q9HBG6 1241 aa3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 RBM12Q9NTZ6 932 aaKnown RBP3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 AJAP1Q9UKB5 411 aaPredicted RBP3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 MTO1Q9Y2Z2 717 aaKnown RBP3.36□□□□□ -1.87
RNU4-42P-201ENST00000364738 CCDC78A2IDD5 438 aa3.35□□□□□ -1.87
RNU4-42P-201ENST00000364738 GOLGA8AA7E2F4 631 aa3.35□□□□□ -1.87
RNU4-42P-201ENST00000364738 ERN1O75460 977 aaKnown RBP3.35□□□□□ -1.87
RNU4-42P-201ENST00000364738 MATN4O95460 622 aa3.35□□□□□ -1.87
RNU4-42P-201ENST00000364738 FPR1P21462 350 aa3.35□□□□□ -1.87
RNU4-42P-201ENST00000364738 RARRES1P49788 294 aa3.35□□□□□ -1.87
RNU4-42P-201ENST00000364738 UBXN2BQ14CS0 331 aa3.35□□□□□ -1.87
RNU4-42P-201ENST00000364738 NOMO1Q15155 1222 aa3.35□□□□□ -1.87
RNU4-42P-201ENST00000364738 DDX46Q7L014 1031 aaKnown RBP3.35□□□□□ -1.87
RNU4-42P-201ENST00000364738 RNF180Q86T96 592 aa3.35□□□□□ -1.87
RNU4-42P-201ENST00000364738 THNSL2Q86YJ6 484 aa3.35□□□□□ -1.87
RNU4-42P-201ENST00000364738 NACC2Q96BF6 587 aa3.35□□□□□ -1.87
RNU4-42P-201ENST00000364738 PTCD3Q96EY7 689 aaKnown RBP3.35□□□□□ -1.87
RNU4-42P-201ENST00000364738 ADI1Q9BV57 179 aa3.35□□□□□ -1.87
RNU4-42P-201ENST00000364738 TMEM74BQ9NUR3 256 aa3.35□□□□□ -1.87
RNU4-42P-201ENST00000364738 TMEM140Q9NV12 185 aa3.35□□□□□ -1.87
RNU4-42P-201ENST00000364738 FBXO34Q9NWN3 711 aa3.35□□□□□ -1.87
RNU4-42P-201ENST00000364738 KCTD5Q9NXV2 234 aa3.35□□□□□ -1.87
RNU4-42P-201ENST00000364738 FOXJ2Q9P0K8 574 aa3.35□□□□□ -1.87
RNU4-42P-201ENST00000364738 SCOCQ9UIL1 159 aa3.35□□□□□ -1.87
RNU4-42P-201ENST00000364738 DMTF1Q9Y222 760 aa3.35□□□□□ -1.87
RNU4-42P-201ENST00000364738 MYADML2A6NDP7 307 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 TEX33O43247 280 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 GPR32O75388 356 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 RBMXL2O75526 392 aaKnown RBP3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 ENDOD1O94919 500 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 PRSS23O95084 383 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 ALAS1P13196 640 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 VAV2P52735 878 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 CACNA2D1P54289 1103 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 SCAND1P57086 179 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 KRTAP10-11P60412 298 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 PPP3CAQ08209 521 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 MALLQ13021 153 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 CYP2A13Q16696 494 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 GEN1Q17RS7 908 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 TOR2AQ5JU69 321 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 OTUD7BQ6GQQ9 843 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 UBE3BQ7Z3V4 1068 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 CMIPQ8IY22 773 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 COLGALT2Q8IYK4 626 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 ZNF384Q8TF68 577 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 CASKIN2Q8WXE0 1202 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 HOXB13Q92826 284 aaPredicted RBP3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 PDLIM2Q96JY6 352 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 MYOCQ99972 504 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 HEPHQ9BQS7 1158 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 KLK15Q9H2R5 256 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 UNKLQ9H9P5 680 aaKnown RBP3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 SEMA4GQ9NTN9 838 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 SLC17A6Q9P2U8 582 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 SLC23A1Q9UHI7 598 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 RUVBL1Q9Y265 456 aaKnown RBP3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 ACTL7AQ9Y615 435 aa3.34□□□□□ -1.87
RNU4-42P-201ENST00000364738 POLR2AP24928 1970 aaKnown RBP3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms