RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 SLC6A2P23975 617 aa6.35□□□□□ -1.39
RNU4-40P-201ENST00000364351 ECHS1P30084 290 aa6.35□□□□□ -1.39
RNU4-40P-201ENST00000364351 ABCG1P45844 678 aa6.35□□□□□ -1.39
RNU4-40P-201ENST00000364351 FOXF2Q12947 444 aa6.35□□□□□ -1.39
RNU4-40P-201ENST00000364351 DALRD3Q5D0E6 543 aaKnown RBP6.35□□□□□ -1.39
RNU4-40P-201ENST00000364351 FOXR2Q6PJQ5 311 aa6.35□□□□□ -1.39
RNU4-40P-201ENST00000364351 SRRM1Q8IYB3 904 aaKnown RBP6.35□□□□□ -1.39
RNU4-40P-201ENST00000364351 NACC2Q96BF6 587 aa6.35□□□□□ -1.39
RNU4-40P-201ENST00000364351 ACAP3Q96P50 834 aa6.35□□□□□ -1.39
RNU4-40P-201ENST00000364351 KLK15Q9H2R5 256 aa6.35□□□□□ -1.39
RNU4-40P-201ENST00000364351 MOCS1Q9NZB8 636 aa6.35□□□□□ -1.39
RNU4-40P-201ENST00000364351 RNF7Q9UBF6 113 aa6.35□□□□□ -1.39
RNU4-40P-201ENST00000364351 USP25Q9UHP3 1055 aa6.35□□□□□ -1.39
RNU4-40P-201ENST00000364351 PRSS23O95084 383 aa6.34□□□□□ -1.39
RNU4-40P-201ENST00000364351 ENPP1P22413 925 aa6.34□□□□□ -1.39
RNU4-40P-201ENST00000364351 GCSHP23434 173 aa6.34□□□□□ -1.39
RNU4-40P-201ENST00000364351 SREBF1P36956 1147 aa6.34□□□□□ -1.39
RNU4-40P-201ENST00000364351 FAM180AQ6UWF9 173 aa6.34□□□□□ -1.39
RNU4-40P-201ENST00000364351 PQLC1Q8N2U9 271 aa6.34□□□□□ -1.39
RNU4-40P-201ENST00000364351 USP7Q93009 1102 aa6.34□□□□□ -1.39
RNU4-40P-201ENST00000364351 PDLIM2Q96JY6 352 aa6.34□□□□□ -1.39
RNU4-40P-201ENST00000364351 SLC29A3Q9BZD2 475 aa6.34□□□□□ -1.39
RNU4-40P-201ENST00000364351 SENP6Q9GZR1 1112 aaPredicted RBP6.34□□□□□ -1.39
RNU4-40P-201ENST00000364351 SLC17A6Q9P2U8 582 aa6.34□□□□□ -1.39
RNU4-40P-201ENST00000364351 KCNE5Q9UJ90 142 aa6.34□□□□□ -1.39
RNU4-40P-201ENST00000364351 DMTF1Q9Y222 760 aa6.34□□□□□ -1.39
RNU4-40P-201ENST00000364351 PLAAQ9Y263 795 aa6.34□□□□□ -1.39
RNU4-40P-201ENST00000364351 SIK3Q9Y2K2 1263 aa6.34□□□□□ -1.39
RNU4-40P-201ENST00000364351 CDC45O75419 566 aa6.33□□□□□ -1.4
RNU4-40P-201ENST00000364351 IL2RBP14784 551 aa6.33□□□□□ -1.4
RNU4-40P-201ENST00000364351 CYP2A13Q16696 494 aa6.33□□□□□ -1.4
RNU4-40P-201ENST00000364351 LDAHQ9H6V9 325 aa6.33□□□□□ -1.4
RNU4-40P-201ENST00000364351 UNKLQ9H9P5 680 aaKnown RBP6.33□□□□□ -1.4
RNU4-40P-201ENST00000364351 IL17RBQ9NRM6 502 aa6.33□□□□□ -1.4
RNU4-40P-201ENST00000364351 ASB6Q9NWX5 421 aa6.33□□□□□ -1.4
RNU4-40P-201ENST00000364351 DNAJC9-AS1A6NH13 148 aa6.32□□□□□ -1.4
RNU4-40P-201ENST00000364351 GSG1L2A8MUP6 293 aa6.32□□□□□ -1.4
RNU4-40P-201ENST00000364351 ERN1O75460 977 aaKnown RBP6.32□□□□□ -1.4
RNU4-40P-201ENST00000364351 ALDH1A3P47895 512 aa6.32□□□□□ -1.4
RNU4-40P-201ENST00000364351 AKNAD1Q5T1N1 836 aa6.32□□□□□ -1.4
RNU4-40P-201ENST00000364351 ZNF529Q6P280 563 aa6.32□□□□□ -1.4
RNU4-40P-201ENST00000364351 THNSL2Q86YJ6 484 aa6.32□□□□□ -1.4
RNU4-40P-201ENST00000364351 CLRN3Q8NCR9 226 aa6.32□□□□□ -1.4
RNU4-40P-201ENST00000364351 TSPEARQ8WU66 669 aa6.32□□□□□ -1.4
RNU4-40P-201ENST00000364351 AUTS2Q8WXX7 1259 aa6.32□□□□□ -1.4
RNU4-40P-201ENST00000364351 FATE1Q969F0 183 aa6.32□□□□□ -1.4
RNU4-40P-201ENST00000364351 HEPHQ9BQS7 1158 aa6.32□□□□□ -1.4
RNU4-40P-201ENST00000364351 FBXO34Q9NWN3 711 aa6.32□□□□□ -1.4
RNU4-40P-201ENST00000364351 KCTD5Q9NXV2 234 aa6.32□□□□□ -1.4
RNU4-40P-201ENST00000364351 KRTAP29-1A8MX34 341 aaPredicted RBP6.31□□□□□ -1.4
RNU4-40P-201ENST00000364351 CKBP12277 381 aa6.31□□□□□ -1.4
RNU4-40P-201ENST00000364351 BPIP17213 487 aa6.31□□□□□ -1.4
RNU4-40P-201ENST00000364351 ID4P47928 161 aa6.31□□□□□ -1.4
RNU4-40P-201ENST00000364351 VAV2P52735 878 aa6.31□□□□□ -1.4
RNU4-40P-201ENST00000364351 SESN3P58005 492 aa6.31□□□□□ -1.4
RNU4-40P-201ENST00000364351 ADRM1Q16186 407 aa6.31□□□□□ -1.4
RNU4-40P-201ENST00000364351 COLGALT2Q8IYK4 626 aa6.31□□□□□ -1.4
RNU4-40P-201ENST00000364351 TGFBRAP1Q8WUH2 860 aa6.31□□□□□ -1.4
RNU4-40P-201ENST00000364351 MYOCQ99972 504 aa6.31□□□□□ -1.4
RNU4-40P-201ENST00000364351 QRSL1Q9H0R6 528 aaKnown RBP6.31□□□□□ -1.4
RNU4-40P-201ENST00000364351 LANCL2Q9NS86 450 aa6.31□□□□□ -1.4
RNU4-40P-201ENST00000364351 PDE8AO60658 829 aa6.3□□□□□ -1.4
RNU4-40P-201ENST00000364351 ULK1O75385 1050 aa6.3□□□□□ -1.4
RNU4-40P-201ENST00000364351 MYCLP1P12525 358 aaPredicted RBP6.3□□□□□ -1.4
RNU4-40P-201ENST00000364351 MRPS9P82933 396 aaKnown RBP6.3□□□□□ -1.4
RNU4-40P-201ENST00000364351 SRSF4Q08170 494 aaKnown RBP6.3□□□□□ -1.4
RNU4-40P-201ENST00000364351 BHLHA9Q7RTU4 235 aa6.3□□□□□ -1.4
RNU4-40P-201ENST00000364351 UBE3BQ7Z3V4 1068 aa6.3□□□□□ -1.4
RNU4-40P-201ENST00000364351 SMG7Q92540 1137 aaKnown RBP6.3□□□□□ -1.4
RNU4-40P-201ENST00000364351 MARS2Q96GW9 593 aaKnown RBP6.3□□□□□ -1.4
RNU4-40P-201ENST00000364351 GREM2Q9H772 168 aa6.3□□□□□ -1.4
RNU4-40P-201ENST00000364351 IFT122Q9HBG6 1241 aa6.3□□□□□ -1.4
RNU4-40P-201ENST00000364351 DMRT3Q9NQL9 472 aa6.3□□□□□ -1.4
RNU4-40P-201ENST00000364351 RBM12Q9NTZ6 932 aaKnown RBP6.3□□□□□ -1.4
RNU4-40P-201ENST00000364351 AJAP1Q9UKB5 411 aaPredicted RBP6.3□□□□□ -1.4
RNU4-40P-201ENST00000364351 COL3A1P02461 1466 aaPredicted RBP6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 A0A087X0B3 334 aa6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 GOLGA8AA7E2F4 631 aa6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 NEMP1O14524 444 aa6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 PEX1O43933 1283 aa6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 PROP1O75360 226 aa6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 ITGB6P18564 788 aa6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 FPR1P21462 350 aa6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 GUCY1A2P33402 732 aa6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 NOMO1Q15155 1222 aa6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 GEN1Q17RS7 908 aa6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 MUM1L1Q5H9M0 696 aa6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 GJC2Q5T442 439 aaPredicted RBP6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 OTUD7BQ6GQQ9 843 aa6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 CMIPQ8IY22 773 aa6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 LNX2Q8N448 690 aa6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 SH2D3CQ8N5H7 860 aa6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 UBXN4Q92575 508 aa6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 DRC1Q96MC2 740 aa6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 IFT22Q9H7X7 185 aa6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 TMEM140Q9NV12 185 aa6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 FAM30AQ9NZY2 134 aa6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 SLC23A1Q9UHI7 598 aa6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 ACTL7AQ9Y615 435 aa6.29□□□□□ -1.4
RNU4-40P-201ENST00000364351 ARHGEF17Q96PE2 2063 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms