RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 DEFB129Q9H1M3 183 aa11.31□□□□□ -0.6
SMC3-201ENST00000361804 AGTP01019 485 aa11.31□□□□□ -0.6
SMC3-201ENST00000361804 KRT16P08779 473 aa11.31□□□□□ -0.6
SMC3-201ENST00000361804 ZSCAN5DPP0CG00 497 aa11.31□□□□□ -0.6
SMC3-201ENST00000361804 RARGP13631 454 aa11.31□□□□□ -0.6
SMC3-201ENST00000361804 TCF4P15884 667 aa11.31□□□□□ -0.6
SMC3-201ENST00000361804 RRM1P23921 792 aa11.31□□□□□ -0.6
SMC3-201ENST00000361804 ELF1P32519 619 aa11.31□□□□□ -0.6
SMC3-201ENST00000361804 NCALDP61601 193 aa11.31□□□□□ -0.6
SMC3-201ENST00000361804 CGB2Q6NT52 195 aa11.31□□□□□ -0.6
SMC3-201ENST00000361804 CCDC50Q8IVM0 306 aa11.31□□□□□ -0.6
SMC3-201ENST00000361804 FAM71AQ8IYT1 594 aa11.31□□□□□ -0.6
SMC3-201ENST00000361804 PSPC1Q8WXF1 523 aaKnown RBP11.31□□□□□ -0.6
SMC3-201ENST00000361804 SGIP1Q9BQI5 828 aa11.31□□□□□ -0.6
SMC3-201ENST00000361804 ECT2Q9H8V3 914 aa11.31□□□□□ -0.6
SMC3-201ENST00000361804 ZNF70Q9UC06 446 aaPredicted RBP11.31□□□□□ -0.6
SMC3-201ENST00000361804 TMX2Q9Y320 296 aa11.31□□□□□ -0.6
SMC3-201ENST00000361804 PI4K2BG5E9Z4 385 aa11.31□□□□□ -0.6
SMC3-201ENST00000361804 ENTPD3O75355 529 aa11.31□□□□□ -0.6
SMC3-201ENST00000361804 CALCOCO2Q13137 446 aa11.31□□□□□ -0.6
SMC3-201ENST00000361804 SNRNP35Q16560 246 aaKnown RBP11.31□□□□□ -0.6
SMC3-201ENST00000361804 RSBN1LQ6PCB5 846 aaPredicted RBP11.31□□□□□ -0.6
SMC3-201ENST00000361804 FITM2Q8N6M3 262 aa11.31□□□□□ -0.6
SMC3-201ENST00000361804 SLC17A8Q8NDX2 589 aa11.31□□□□□ -0.6
SMC3-201ENST00000361804 VEZTQ9HBM0 779 aa11.31□□□□□ -0.6
SMC3-201ENST00000361804 FZD1Q9UP38 647 aa11.31□□□□□ -0.6
SMC3-201ENST00000361804 NFKBIEO00221 500 aa11.3□□□□□ -0.6
SMC3-201ENST00000361804 BANF1O75531 89 aa11.3□□□□□ -0.6
SMC3-201ENST00000361804 RAD17O75943 681 aa11.3□□□□□ -0.6
SMC3-201ENST00000361804 MYCLP12524 364 aaPredicted RBP11.3□□□□□ -0.6
SMC3-201ENST00000361804 ETS1P14921 441 aa11.3□□□□□ -0.6
SMC3-201ENST00000361804 DPEP1P16444 411 aa11.3□□□□□ -0.6
SMC3-201ENST00000361804 CD58P19256 250 aa11.3□□□□□ -0.6
SMC3-201ENST00000361804 INTS8Q75QN2 995 aaKnown RBP11.3□□□□□ -0.6
SMC3-201ENST00000361804 ANKLE1Q8NAG6 615 aa11.3□□□□□ -0.6
SMC3-201ENST00000361804 KCNV2Q8TDN2 545 aa11.3□□□□□ -0.6
SMC3-201ENST00000361804 BSNDQ8WZ55 320 aa11.3□□□□□ -0.6
SMC3-201ENST00000361804 HAUS1Q96CS2 278 aa11.3□□□□□ -0.6
SMC3-201ENST00000361804 PASKQ96RG2 1323 aa11.3□□□□□ -0.6
SMC3-201ENST00000361804 MIF4GDA9UHW6 222 aaKnown RBP11.3□□□□□ -0.6
SMC3-201ENST00000361804 DNAJC8O75937 253 aaPredicted RBP11.3□□□□□ -0.6
SMC3-201ENST00000361804 PTGER2P43116 358 aa11.3□□□□□ -0.6
SMC3-201ENST00000361804 RWDD2BP57060 319 aa11.3□□□□□ -0.6
SMC3-201ENST00000361804 NEDD9Q14511 834 aa11.3□□□□□ -0.6
SMC3-201ENST00000361804 HELQQ8TDG4 1101 aa11.3□□□□□ -0.6
SMC3-201ENST00000361804 C10orf88Q9H8K7 445 aa11.3□□□□□ -0.6
SMC3-201ENST00000361804 BRAFP15056 766 aa11.3□□□□□ -0.6
SMC3-201ENST00000361804 ADCY8P40145 1251 aa11.3□□□□□ -0.6
SMC3-201ENST00000361804 WLSQ5T9L3 541 aa11.3□□□□□ -0.6
SMC3-201ENST00000361804 KAZNQ674X7 775 aa11.3□□□□□ -0.6
SMC3-201ENST00000361804 CENPTQ96BT3 561 aa11.3□□□□□ -0.6
SMC3-201ENST00000361804 LARSQ9P2J5 1176 aaKnown RBP11.3□□□□□ -0.6
SMC3-201ENST00000361804 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.3□□□□□ -0.6
SMC3-201ENST00000361804 PODXLO00592 558 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 WNT10BO00744 389 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 ASAP2O43150 1006 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 THAP12O43422 761 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 GRIN3BO60391 1043 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 RALAP11233 206 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 IVDP26440 423 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 DRG2P55039 364 aaKnown RBP11.29□□□□□ -0.6
SMC3-201ENST00000361804 MRPS9P82933 396 aaKnown RBP11.29□□□□□ -0.6
SMC3-201ENST00000361804 GHRHRQ02643 423 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 FASTKD3Q14CZ7 662 aaKnown RBP11.29□□□□□ -0.6
SMC3-201ENST00000361804 C12orf65Q9H3J6 166 aaKnown RBP11.29□□□□□ -0.6
SMC3-201ENST00000361804 DIS3Q9Y2L1 958 aaKnown RBP11.29□□□□□ -0.6
SMC3-201ENST00000361804 KRT10P13645 584 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 MAPK4P31152 587 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 FOXN2P32314 431 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 STXBP4Q6ZWJ1 553 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 MTMR14Q8NCE2 650 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 C3orf20Q8ND61 904 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 TMEM237Q96Q45 408 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 ACCSQ96QU6 501 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 MXRA8Q9BRK3 442 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 WNT8AQ9H1J5 351 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 ARHGEF10LQ9HCE6 1279 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 SLCO1B3Q9NPD5 702 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 NINJ2Q9NZG7 142 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 SEL1LQ9UBV2 794 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 MTUS1Q9ULD2 1270 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 YWHABP31946 246 aaKnown RBP11.29□□□□□ -0.6
SMC3-201ENST00000361804 TAS2R40P59535 323 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 SEZ6Q53EL9 994 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 TMEM63BQ5T3F8 832 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 SLC39A4Q6P5W5 647 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 NSMCE1Q8WV22 266 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 DDX1Q92499 740 aaKnown RBP11.29□□□□□ -0.6
SMC3-201ENST00000361804 CCPG1Q9ULG6 757 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 MROH7Q68CQ1 1323 aa11.29□□□□□ -0.6
SMC3-201ENST00000361804 H0YIN7 160 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 SLC26A4O43511 780 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 MCCD1P59942 119 aaPredicted RBP11.28□□□□□ -0.6
SMC3-201ENST00000361804 CETN1Q12798 172 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 TMED2Q15363 201 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 NFIL3Q16649 462 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 XKR9Q5GH70 373 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 CC2D2BQ6DHV5 1058 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 SHC3Q92529 594 aa11.28□□□□□ -0.6
SMC3-201ENST00000361804 TGS1Q96RS0 853 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms