RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 AZI2Q9H6S1 392 aa24.24■■□□□ 1.47
LDB1-201ENST00000361198 TMEM134Q9H6X4 195 aa24.24■■□□□ 1.47
LDB1-201ENST00000361198 PLAAQ9Y263 795 aa24.24■■□□□ 1.47
LDB1-201ENST00000361198 DIS3Q9Y2L1 958 aaKnown RBP24.24■■□□□ 1.47
LDB1-201ENST00000361198 ANKRD65E5RJM6 399 aa24.23■■□□□ 1.47
LDB1-201ENST00000361198 ADCY3O60266 1144 aa24.23■■□□□ 1.47
LDB1-201ENST00000361198 HLTFQ14527 1009 aaKnown RBP eCLIP24.23■■□□□ 1.47
LDB1-201ENST00000361198 TTC19Q6DKK2 380 aaPredicted RBP24.23■■□□□ 1.47
LDB1-201ENST00000361198 PRPF31Q8WWY3 499 aaKnown RBP24.23■■□□□ 1.47
LDB1-201ENST00000361198 AMACRQ9UHK6 382 aa24.23■■□□□ 1.47
LDB1-201ENST00000361198 NR2E1Q9Y466 385 aa24.23■■□□□ 1.47
LDB1-201ENST00000361198 ADGRA2Q96PE1 1338 aa24.23■■□□□ 1.47
LDB1-201ENST00000361198 TTLL13PA6NNM8 815 aa24.23■■□□□ 1.47
LDB1-201ENST00000361198 TMEM110-MUSTN1A8MSY1 372 aa24.23■■□□□ 1.47
LDB1-201ENST00000361198 H0YGN5 161 aa24.23■■□□□ 1.47
LDB1-201ENST00000361198 NR1D1P20393 614 aa24.23■■□□□ 1.47
LDB1-201ENST00000361198 ZNF211Q13398 564 aaPredicted RBP24.23■■□□□ 1.47
LDB1-201ENST00000361198 BIRC3Q13489 604 aa24.23■■□□□ 1.47
LDB1-201ENST00000361198 KCTD19Q17RG1 926 aaPredicted RBP24.23■■□□□ 1.47
LDB1-201ENST00000361198 SKIDA1Q1XH10 827 aa24.23■■□□□ 1.47
LDB1-201ENST00000361198 SEZ6Q53EL9 994 aa24.23■■□□□ 1.47
LDB1-201ENST00000361198 SPOPLQ6IQ16 392 aa24.23■■□□□ 1.47
LDB1-201ENST00000361198 GLG1Q92896 1179 aa24.23■■□□□ 1.47
LDB1-201ENST00000361198 LRRC45Q96CN5 670 aa24.23■■□□□ 1.47
LDB1-201ENST00000361198 GPR20Q99678 358 aa24.23■■□□□ 1.47
LDB1-201ENST00000361198 TMBIM4Q9HC24 238 aa24.23■■□□□ 1.47
LDB1-201ENST00000361198 NFS1Q9Y697 457 aa24.23■■□□□ 1.47
LDB1-201ENST00000361198 A0A087WUV0 522 aaPredicted RBP24.22■■□□□ 1.47
LDB1-201ENST00000361198 MTA2O94776 668 aa24.22■■□□□ 1.47
LDB1-201ENST00000361198 VNN1O95497 513 aa24.22■■□□□ 1.47
LDB1-201ENST00000361198 LDHAP00338 332 aaKnown RBP24.22■■□□□ 1.47
LDB1-201ENST00000361198 HSD17B3P37058 310 aa24.22■■□□□ 1.47
LDB1-201ENST00000361198 MESDQ14696 234 aa24.22■■□□□ 1.47
LDB1-201ENST00000361198 NAA35Q5VZE5 725 aa24.22■■□□□ 1.47
LDB1-201ENST00000361198 DNAJC25-GNG10A0A024R161 153 aa24.22■■□□□ 1.47
LDB1-201ENST00000361198 PIK3CAP42336 1068 aa24.22■■□□□ 1.47
LDB1-201ENST00000361198 ATP1A2P50993 1020 aa24.22■■□□□ 1.47
LDB1-201ENST00000361198 KCTD2Q14681 263 aa24.22■■□□□ 1.47
LDB1-201ENST00000361198 WDR44Q5JSH3 913 aa24.22■■□□□ 1.47
LDB1-201ENST00000361198 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.22■■□□□ 1.474e-6■■■■□ 26
LDB1-201ENST00000361198 KRT35Q92764 455 aa24.22■■□□□ 1.47
LDB1-201ENST00000361198 ZNF653Q96CK0 615 aa24.22■■□□□ 1.47
LDB1-201ENST00000361198 MMP19Q99542 508 aa24.22■■□□□ 1.47
LDB1-201ENST00000361198 NUP85Q9BW27 656 aa24.22■■□□□ 1.47
LDB1-201ENST00000361198 GTF3C4Q9UKN8 822 aa24.22■■□□□ 1.47
LDB1-201ENST00000361198 CPP00450 1065 aa24.21■■□□□ 1.47
LDB1-201ENST00000361198 CYP1A2P05177 515 aa24.21■■□□□ 1.47
LDB1-201ENST00000361198 LSP1P33241 339 aa24.21■■□□□ 1.47
LDB1-201ENST00000361198 UAP1Q16222 522 aaPredicted RBP24.21■■□□□ 1.47
LDB1-201ENST00000361198 CELF3Q5SZQ8 465 aaKnown RBP24.21■■□□□ 1.47
LDB1-201ENST00000361198 WDR78Q5VTH9 848 aa24.21■■□□□ 1.47
LDB1-201ENST00000361198 MAATS1Q7Z4T9 603 aa24.21■■□□□ 1.47
LDB1-201ENST00000361198 FBXO16Q8IX29 292 aaPredicted RBP24.21■■□□□ 1.47
LDB1-201ENST00000361198 MPHOSPH6Q99547 160 aaKnown RBP24.21■■□□□ 1.47
LDB1-201ENST00000361198 TRPC6Q9Y210 931 aa24.21■■□□□ 1.47
LDB1-201ENST00000361198 FAM169AQ9Y6X4 670 aa24.21■■□□□ 1.47
LDB1-201ENST00000361198 NOP56O00567 594 aaKnown RBP24.21■■□□□ 1.47
LDB1-201ENST00000361198 HARSP12081 509 aaKnown RBP24.21■■□□□ 1.47
LDB1-201ENST00000361198 COMTP21964 271 aa24.21■■□□□ 1.47
LDB1-201ENST00000361198 MARCKSL1P49006 195 aa24.21■■□□□ 1.47
LDB1-201ENST00000361198 MKRN4PQ13434 485 aaPredicted RBP24.21■■□□□ 1.47
LDB1-201ENST00000361198 CEP85LQ5SZL2 805 aa24.21■■□□□ 1.47
LDB1-201ENST00000361198 ACAD10Q6JQN1 1059 aa24.21■■□□□ 1.47
LDB1-201ENST00000361198 GPAT2Q6NUI2 795 aa24.21■■□□□ 1.47
LDB1-201ENST00000361198 USP50Q70EL3 339 aaPredicted RBP24.21■■□□□ 1.47
LDB1-201ENST00000361198 ZNF564Q8TBZ8 553 aaPredicted RBP24.21■■□□□ 1.47
LDB1-201ENST00000361198 BBXQ8WY36 941 aaPredicted RBP24.21■■□□□ 1.47
LDB1-201ENST00000361198 BTBD6Q96KE9 485 aa24.21■■□□□ 1.47
LDB1-201ENST00000361198 FAM167AQ96KS9 214 aa24.21■■□□□ 1.47
LDB1-201ENST00000361198 FAM81BQ96LP2 452 aa24.21■■□□□ 1.47
LDB1-201ENST00000361198 SYT17Q9BSW7 474 aa24.21■■□□□ 1.47
LDB1-201ENST00000361198 CNTNAP2Q9UHC6 1331 aa24.2■■□□□ 1.47
LDB1-201ENST00000361198 SRRM3A6NNA2 597 aaPredicted RBP24.2■■□□□ 1.46
LDB1-201ENST00000361198 MIF4GDA9UHW6 222 aaKnown RBP24.2■■□□□ 1.46
LDB1-201ENST00000361198 EPHX2P34913 555 aa24.2■■□□□ 1.46
LDB1-201ENST00000361198 POU5F1Q01860 360 aaKnown RBP24.2■■□□□ 1.46
LDB1-201ENST00000361198 AADACL2Q6P093 401 aa24.2■■□□□ 1.46
LDB1-201ENST00000361198 ADAT2Q7Z6V5 191 aaKnown RBP24.2■■□□□ 1.46
LDB1-201ENST00000361198 DDX42Q86XP3 938 aaKnown RBP eCLIP24.2■■□□□ 1.46
LDB1-201ENST00000361198 CCDC26Q8TAB7 109 aa24.2■■□□□ 1.46
LDB1-201ENST00000361198 NEUROG2Q9H2A3 272 aa24.2■■□□□ 1.46
LDB1-201ENST00000361198 ZBTB42B2RXF5 422 aa24.19■■□□□ 1.46
LDB1-201ENST00000361198 CLEC16AQ2KHT3 1053 aa24.19■■□□□ 1.46
LDB1-201ENST00000361198 TMEM63BQ5T3F8 832 aa24.19■■□□□ 1.46
LDB1-201ENST00000361198 KCNV1Q6PIU1 500 aa24.19■■□□□ 1.46
LDB1-201ENST00000361198 FASTKD5Q7L8L6 764 aaKnown RBP24.19■■□□□ 1.46
LDB1-201ENST00000361198 TADA2BQ86TJ2 420 aa24.19■■□□□ 1.46
LDB1-201ENST00000361198 LRRC71Q8N4P6 559 aa24.19■■□□□ 1.46
LDB1-201ENST00000361198 OR5B17Q8NGF7 314 aa24.19■■□□□ 1.46
LDB1-201ENST00000361198 RPS6KC1Q96S38 1066 aa24.19■■□□□ 1.46
LDB1-201ENST00000361198 EPN3Q9H201 632 aa24.19■■□□□ 1.46
LDB1-201ENST00000361198 APOBEC3GQ9HC16 384 aaKnown RBP24.19■■□□□ 1.46
LDB1-201ENST00000361198 NDUFAB1O14561 156 aa24.19■■□□□ 1.46
LDB1-201ENST00000361198 MSCO60682 206 aa24.19■■□□□ 1.46
LDB1-201ENST00000361198 LGR5O75473 907 aa24.19■■□□□ 1.46
LDB1-201ENST00000361198 OSBPP22059 807 aa24.19■■□□□ 1.46
LDB1-201ENST00000361198 DPY19L2Q6NUT2 758 aa24.19■■□□□ 1.46
LDB1-201ENST00000361198 CPNE8Q86YQ8 564 aa24.19■■□□□ 1.46
LDB1-201ENST00000361198 ZC3H15Q8WU90 426 aaKnown RBP24.19■■□□□ 1.46
LDB1-201ENST00000361198 COPS5Q92905 334 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms