RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 C8orf76Q96K31 380 aa16.55■□□□□ 0.24
GDPD3-201ENST00000360688 BHMT2Q9H2M3 363 aa16.55■□□□□ 0.24
GDPD3-201ENST00000360688 FOXP1Q9H334 677 aaPredicted RBP16.55■□□□□ 0.24
GDPD3-201ENST00000360688 GOLGA2P5Q9HBQ8 144 aa16.55■□□□□ 0.24
GDPD3-201ENST00000360688 HCFC1R1Q9NWW0 138 aa16.55■□□□□ 0.24
GDPD3-201ENST00000360688 DNMT3BQ9UBC3 853 aaKnown RBP16.55■□□□□ 0.24
GDPD3-201ENST00000360688 DAXXQ9UER7 740 aaPredicted RBP16.55■□□□□ 0.24
GDPD3-201ENST00000360688 CDY1Q9Y6F8 540 aa16.55■□□□□ 0.24
GDPD3-201ENST00000360688 TKTP29401 623 aaKnown RBP16.54■□□□□ 0.24
GDPD3-201ENST00000360688 CCT6AP40227 531 aaKnown RBP16.54■□□□□ 0.24
GDPD3-201ENST00000360688 MLF2Q15773 248 aaPredicted RBP16.54■□□□□ 0.24
GDPD3-201ENST00000360688 UPP1Q16831 310 aa16.54■□□□□ 0.24
GDPD3-201ENST00000360688 PABPC1LQ4VXU2 614 aaKnown RBP16.54■□□□□ 0.24
GDPD3-201ENST00000360688 TTC38Q5R3I4 469 aa16.54■□□□□ 0.24
GDPD3-201ENST00000360688 RTL10Q7L3V2 364 aa16.54■□□□□ 0.24
GDPD3-201ENST00000360688 NPAS3Q8IXF0 933 aa16.54■□□□□ 0.24
GDPD3-201ENST00000360688 CEP120Q8N960 986 aa16.54■□□□□ 0.24
GDPD3-201ENST00000360688 C3orf58Q8NDZ4 430 aa16.54■□□□□ 0.24
GDPD3-201ENST00000360688 KIFAP3Q92845 792 aa16.54■□□□□ 0.24
GDPD3-201ENST00000360688 DDX27Q96GQ7 796 aaKnown RBP16.54■□□□□ 0.24
GDPD3-201ENST00000360688 UROC1Q96N76 676 aa16.54■□□□□ 0.24
GDPD3-201ENST00000360688 DDX23Q9BUQ8 820 aaKnown RBP16.54■□□□□ 0.24
GDPD3-201ENST00000360688 KCNH3Q9ULD8 1083 aa16.54■□□□□ 0.24
GDPD3-201ENST00000360688 TNFSF13BQ9Y275 285 aa16.54■□□□□ 0.24
GDPD3-201ENST00000360688 BACE2Q9Y5Z0 518 aa16.54■□□□□ 0.24
GDPD3-201ENST00000360688 KANSL1LA0AUZ9 987 aa16.53■□□□□ 0.24
GDPD3-201ENST00000360688 K7ERI5 159 aa16.53■□□□□ 0.24
GDPD3-201ENST00000360688 TRAPPC3O43617 180 aa16.53■□□□□ 0.24
GDPD3-201ENST00000360688 BRCC3P46736 316 aa16.53■□□□□ 0.24
GDPD3-201ENST00000360688 FXR2P51116 673 aaKnown RBP eCLIP16.53■□□□□ 0.24
GDPD3-201ENST00000360688 PRKCQQ04759 706 aa16.53■□□□□ 0.24
GDPD3-201ENST00000360688 SOX4Q06945 474 aaPredicted RBP16.53■□□□□ 0.24
GDPD3-201ENST00000360688 SLC44A4Q53GD3 710 aa16.53■□□□□ 0.24
GDPD3-201ENST00000360688 ZC3H14Q6PJT7 736 aaKnown RBP16.53■□□□□ 0.24
GDPD3-201ENST00000360688 ANKS3Q6ZW76 656 aa16.53■□□□□ 0.24
GDPD3-201ENST00000360688 MAML2Q8IZL2 1156 aaPredicted RBP16.53■□□□□ 0.24
GDPD3-201ENST00000360688 C4orf32Q8N8J7 132 aa16.53■□□□□ 0.24
GDPD3-201ENST00000360688 ING5Q8WYH8 240 aa16.53■□□□□ 0.24
GDPD3-201ENST00000360688 KXD1Q9BQD3 176 aa16.53■□□□□ 0.24
GDPD3-201ENST00000360688 KIAA1024Q9UPX6 916 aa16.53■□□□□ 0.24
GDPD3-201ENST00000360688 CEP250Q9BV73 2442 aa16.53■□□□□ 0.24
GDPD3-201ENST00000360688 SMIM28A0A1B0GU29 152 aa16.52■□□□□ 0.24
GDPD3-201ENST00000360688 I3L4J1 428 aa16.52■□□□□ 0.24
GDPD3-201ENST00000360688 GRM5P41594 1212 aa16.52■□□□□ 0.24
GDPD3-201ENST00000360688 PDCD11Q14690 1871 aaKnown RBP16.52■□□□□ 0.24
GDPD3-201ENST00000360688 XKR4Q5GH76 650 aa16.52■□□□□ 0.24
GDPD3-201ENST00000360688 ALKAL1Q6UXT8 129 aa16.52■□□□□ 0.24
GDPD3-201ENST00000360688 APBB1IPQ7Z5R6 666 aaPredicted RBP16.52■□□□□ 0.24
GDPD3-201ENST00000360688 CCDC83Q8IWF9 413 aa16.52■□□□□ 0.24
GDPD3-201ENST00000360688 FBXO18Q8NFZ0 1043 aa16.52■□□□□ 0.24
GDPD3-201ENST00000360688 ACO2Q99798 780 aaKnown RBP16.52■□□□□ 0.24
GDPD3-201ENST00000360688 DDX19AQ9NUU7 478 aaKnown RBP16.52■□□□□ 0.24
GDPD3-201ENST00000360688 LRWD1Q9UFC0 647 aa16.52■□□□□ 0.24
GDPD3-201ENST00000360688 MTF2Q9Y483 593 aaPredicted RBP16.52■□□□□ 0.24
GDPD3-201ENST00000360688 MYH11P35749 1972 aa16.52■□□□□ 0.23
GDPD3-201ENST00000360688 GPR179Q6PRD1 2367 aa16.52■□□□□ 0.23
GDPD3-201ENST00000360688 DNAH14Q0VDD8 3507 aa16.52■□□□□ 0.23
GDPD3-201ENST00000360688 NPTX2P47972 431 aa16.51■□□□□ 0.23
GDPD3-201ENST00000360688 PFKPQ01813 784 aa16.51■□□□□ 0.23
GDPD3-201ENST00000360688 PDIA5Q14554 519 aa16.51■□□□□ 0.23
GDPD3-201ENST00000360688 NBR1Q14596 966 aa16.51■□□□□ 0.23
GDPD3-201ENST00000360688 SLC5A9Q2M3M2 681 aa16.51■□□□□ 0.23
GDPD3-201ENST00000360688 LLPHQ9BRT6 129 aaKnown RBP16.51■□□□□ 0.23
GDPD3-201ENST00000360688 CCDC94Q9BW85 323 aaPredicted RBP16.51■□□□□ 0.23
GDPD3-201ENST00000360688 BCO2Q9BYV7 579 aa16.51■□□□□ 0.23
GDPD3-201ENST00000360688 OSBPL6Q9BZF3 934 aa16.51■□□□□ 0.23
GDPD3-201ENST00000360688 CDT1Q9H211 546 aa16.51■□□□□ 0.23
GDPD3-201ENST00000360688 PTPRHQ9HD43 1115 aa16.51■□□□□ 0.23
GDPD3-201ENST00000360688 TOPORSQ9NS56 1045 aaPredicted RBP16.51■□□□□ 0.23
GDPD3-201ENST00000360688 LIMCH1Q9UPQ0 1083 aa16.51■□□□□ 0.23
GDPD3-201ENST00000360688 MRPS23Q9Y3D9 190 aaKnown RBP16.51■□□□□ 0.23
GDPD3-201ENST00000360688 PHLPP2Q6ZVD8 1323 aa16.51■□□□□ 0.23
GDPD3-201ENST00000360688 ARHGEF37A1IGU5 675 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 FAM170BA6NMN3 283 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 CCDC169A6NNP5 214 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 RHOP08100 348 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 CD72P21854 359 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 TRAPPC10P48553 1259 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 YARSP54577 528 aaKnown RBP16.5■□□□□ 0.23
GDPD3-201ENST00000360688 PEX3P56589 373 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 OSTNP61366 133 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 ROR1Q01973 937 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 UBXN2BQ14CS0 331 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 ZNF568Q3ZCX4 644 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 SLC8B1Q6J4K2 584 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 POTEHQ6S545 545 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 TAS1R3Q7RTX0 852 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 KIAA2013Q8IYS2 634 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 DAW1Q8N136 415 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 IGSF22Q8N9C0 903 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 ZNF461Q8TAF7 563 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 SNX29Q8TEQ0 813 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 RMDN1Q96DB5 314 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 MCRS1Q96EZ8 462 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 ZMAT2Q96NC0 199 aaKnown RBP16.5■□□□□ 0.23
GDPD3-201ENST00000360688 TMEM134Q9H6X4 195 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 LTB4R2Q9NPC1 389 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 SLC38A7Q9NVC3 462 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 GDE1Q9NZC3 331 aa16.5■□□□□ 0.23
GDPD3-201ENST00000360688 WDR27A2RRH5 827 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms