RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 IFNL1Q8IU54 200 aa13.6□□□□□ -0.23
GGPS1-202ENST00000358966 TMEM174Q8WUU8 243 aa13.6□□□□□ -0.23
GGPS1-202ENST00000358966 ADGRA2Q96PE1 1338 aa13.6□□□□□ -0.23
GGPS1-202ENST00000358966 TSGA10Q9BZW7 698 aa13.6□□□□□ -0.23
GGPS1-202ENST00000358966 PLEKHA4Q9H4M7 779 aa13.6□□□□□ -0.23
GGPS1-202ENST00000358966 IFT122Q9HBG6 1241 aa13.6□□□□□ -0.23
GGPS1-202ENST00000358966 SAR1BQ9Y6B6 198 aa13.6□□□□□ -0.23
GGPS1-202ENST00000358966 PJA2O43164 708 aa13.6□□□□□ -0.23
GGPS1-202ENST00000358966 VNN1O95497 513 aa13.6□□□□□ -0.23
GGPS1-202ENST00000358966 RHOXF2BP0C7M4 288 aa13.6□□□□□ -0.23
GGPS1-202ENST00000358966 SNRPFP62306 86 aaKnown RBP13.6□□□□□ -0.23
GGPS1-202ENST00000358966 MAPK6Q16659 721 aa13.6□□□□□ -0.23
GGPS1-202ENST00000358966 DUSP28Q4G0W2 176 aa13.6□□□□□ -0.23
GGPS1-202ENST00000358966 ZNF662Q6ZS27 426 aa13.6□□□□□ -0.23
GGPS1-202ENST00000358966 NOP9Q86U38 636 aaKnown RBP13.6□□□□□ -0.23
GGPS1-202ENST00000358966 ACO2Q99798 780 aaKnown RBP13.6□□□□□ -0.23
GGPS1-202ENST00000358966 RHOXF2Q9BQY4 288 aa13.6□□□□□ -0.23
GGPS1-202ENST00000358966 FAM49AQ9H0Q0 323 aaPredicted RBP13.6□□□□□ -0.23
GGPS1-202ENST00000358966 ABHD16BQ9H3Z7 469 aa13.6□□□□□ -0.23
GGPS1-202ENST00000358966 RNF19AQ9NV58 838 aa13.6□□□□□ -0.23
GGPS1-202ENST00000358966 MAPK13O15264 365 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 FAM189A1O60320 539 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 TACC1O75410 805 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 ELF1P32519 619 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 GALCP54803 685 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 CAP1Q01518 475 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 TNFAIP2Q03169 654 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 NAB2Q15742 525 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 C2CD6Q53TS8 623 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 CC2D1AQ6P1N0 951 aaPredicted RBP13.59□□□□□ -0.23
GGPS1-202ENST00000358966 TRIM58Q8NG06 486 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 ARHGEF26Q96DR7 871 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 MS4A14Q96JA4 679 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 SYT11Q9BT88 431 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 MTMR12Q9C0I1 747 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 VPS18Q9P253 973 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 STYXL1Q9Y6J8 313 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 CNTNAP2Q9UHC6 1331 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 GRID2IPA4D2P6 1211 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 N4BP1O75113 896 aaKnown RBP13.59□□□□□ -0.23
GGPS1-202ENST00000358966 ERLIN2O94905 339 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 HLA-DRAP01903 254 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 MMEP08473 750 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 KRT5P13647 590 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 PIK3CAP42336 1068 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 MBTD1Q05BQ5 628 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 HIC1Q14526 733 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 MORN1Q5T089 497 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 MARCH8Q5T0T0 291 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 CDCA2Q69YH5 1023 aaPredicted RBP13.59□□□□□ -0.23
GGPS1-202ENST00000358966 SRGAP1Q7Z6B7 1085 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 RPUSD2Q8IZ73 545 aaKnown RBP13.59□□□□□ -0.23
GGPS1-202ENST00000358966 TMC2Q8TDI7 906 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 SCLT1Q96NL6 688 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 NOX5Q96PH1 765 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 PCDHB18PQ96TA0 734 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 TLR10Q9BXR5 811 aa13.59□□□□□ -0.23
GGPS1-202ENST00000358966 MRPL4Q9BYD3 311 aaKnown RBP13.59□□□□□ -0.23
GGPS1-202ENST00000358966 APOBEC3GQ9HC16 384 aaKnown RBP13.59□□□□□ -0.23
GGPS1-202ENST00000358966 EFCAB8A8MWE9 144 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 FAM155AB1AL88 458 aaPredicted RBP13.58□□□□□ -0.24
GGPS1-202ENST00000358966 H0YCG3 227 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 ABLIM1O14639 778 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 CST3P01034 146 aaPredicted RBP13.58□□□□□ -0.24
GGPS1-202ENST00000358966 PPFIA1Q13136 1202 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 MAP2K5Q13163 448 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 MXD4Q14582 209 aaPredicted RBP13.58□□□□□ -0.24
GGPS1-202ENST00000358966 PSMD6Q15008 389 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 KIZQ2M2Z5 673 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 ZNF568Q3ZCX4 644 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 FBXW10Q5XX13 1052 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 CYP4F22Q6NT55 531 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 PHLDB2Q86SQ0 1253 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 ZBTB8OSQ8IWT0 167 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 SLC30A5Q8TAD4 765 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 EPS8L1Q8TE68 723 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 NT5C1BQ96P26 610 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 THAP2Q9H0W7 228 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 TMEM134Q9H6X4 195 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 RBM47A0AV96 593 aaKnown RBP13.58□□□□□ -0.24
GGPS1-202ENST00000358966 TOM1L1O75674 476 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 PIGRP01833 764 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 GPC3P51654 580 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 ZNF200P98182 395 aaPredicted RBP13.58□□□□□ -0.24
GGPS1-202ENST00000358966 GRIK4Q16099 956 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 PAPD7Q5XG87 772 aaKnown RBP13.58□□□□□ -0.24
GGPS1-202ENST00000358966 C17orf99Q6UX52 265 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 RSRC2Q7L4I2 434 aaKnown RBP13.58□□□□□ -0.24
GGPS1-202ENST00000358966 TCP11Q8WWU5 503 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 FAM210AQ96ND0 272 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 ETAA1Q9NY74 926 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 NENFQ9UMX5 172 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 COQ4Q9Y3A0 265 aa13.58□□□□□ -0.24
GGPS1-202ENST00000358966 BZW2Q9Y6E2 419 aaKnown RBP13.58□□□□□ -0.24
GGPS1-202ENST00000358966 SLC15A5A6NIM6 579 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 C4BPAP04003 597 aaKnown RBP13.57□□□□□ -0.24
GGPS1-202ENST00000358966 CXCL8P10145 99 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 LIG3P49916 1009 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 C2orf54Q08AI8 447 aa13.57□□□□□ -0.24
GGPS1-202ENST00000358966 ZACNQ401N2 412 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms