RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 SMIM28A0A1B0GU29 152 aa16.52■□□□□ 0.24
TPM1-206ENST00000358278 PTGESO14684 152 aa16.52■□□□□ 0.24
TPM1-206ENST00000358278 INPPL1O15357 1258 aa16.52■□□□□ 0.24
TPM1-206ENST00000358278 XPOTO43592 962 aaKnown RBP16.52■□□□□ 0.24
TPM1-206ENST00000358278 NFICP08651 508 aa16.52■□□□□ 0.24
TPM1-206ENST00000358278 KCNE1P15382 129 aa16.52■□□□□ 0.24
TPM1-206ENST00000358278 TNNI1P19237 187 aa16.52■□□□□ 0.24
TPM1-206ENST00000358278 VAMP7P51809 220 aa16.52■□□□□ 0.24
TPM1-206ENST00000358278 WNT7BP56706 349 aa16.52■□□□□ 0.24
TPM1-206ENST00000358278 BTG3Q14201 252 aaPredicted RBP16.52■□□□□ 0.24
TPM1-206ENST00000358278 XKR4Q5GH76 650 aa16.52■□□□□ 0.24
TPM1-206ENST00000358278 TCERG1LQ5VWI1 586 aa16.52■□□□□ 0.24
TPM1-206ENST00000358278 FRMD5Q7Z6J6 570 aa16.52■□□□□ 0.24
TPM1-206ENST00000358278 LUZP1Q86V48 1076 aa16.52■□□□□ 0.24
TPM1-206ENST00000358278 GSTCDQ8NEC7 633 aa16.52■□□□□ 0.24
TPM1-206ENST00000358278 PARD3BQ8TEW8 1205 aa16.52■□□□□ 0.24
TPM1-206ENST00000358278 ZNF689Q96CS4 500 aaPredicted RBP16.52■□□□□ 0.24
TPM1-206ENST00000358278 FAM193BQ96PV7 902 aaPredicted RBP16.52■□□□□ 0.24
TPM1-206ENST00000358278 TBC1D13Q9NVG8 400 aa16.52■□□□□ 0.24
TPM1-206ENST00000358278 FANCLQ9NW38 375 aa16.52■□□□□ 0.24
TPM1-206ENST00000358278 PLAGL2Q9UPG8 496 aa16.52■□□□□ 0.24
TPM1-206ENST00000358278 GOLGA6L19H0YKK7 550 aa16.51■□□□□ 0.23
TPM1-206ENST00000358278 TMEM191BP0C7N4 346 aa16.51■□□□□ 0.23
TPM1-206ENST00000358278 TPM4P67936 248 aa16.51■□□□□ 0.23
TPM1-206ENST00000358278 TFAMQ00059 246 aaKnown RBP16.51■□□□□ 0.23
TPM1-206ENST00000358278 NCAPHQ15003 741 aa16.51■□□□□ 0.23
TPM1-206ENST00000358278 IQCB1Q15051 598 aa16.51■□□□□ 0.23
TPM1-206ENST00000358278 WDR49Q8IV35 697 aa16.51■□□□□ 0.23
TPM1-206ENST00000358278 CMTR2Q8IYT2 770 aaKnown RBP16.51■□□□□ 0.23
TPM1-206ENST00000358278 TMC2Q8TDI7 906 aa16.51■□□□□ 0.23
TPM1-206ENST00000358278 ZMAT2Q96NC0 199 aaKnown RBP16.51■□□□□ 0.23
TPM1-206ENST00000358278 TSPAN18Q96SJ8 248 aa16.51■□□□□ 0.23
TPM1-206ENST00000358278 RAD9AQ99638 391 aa16.51■□□□□ 0.23
TPM1-206ENST00000358278 CGRRF1Q99675 332 aa16.51■□□□□ 0.23
TPM1-206ENST00000358278 RC3H2Q9HBD1 1191 aaKnown RBP16.51■□□□□ 0.23
TPM1-206ENST00000358278 SLC38A7Q9NVC3 462 aa16.51■□□□□ 0.23
TPM1-206ENST00000358278 MIOSQ9NXC5 875 aa16.51■□□□□ 0.23
TPM1-206ENST00000358278 DERAQ9Y315 318 aa16.51■□□□□ 0.23
TPM1-206ENST00000358278 C2CD2Q9Y426 696 aa16.51■□□□□ 0.23
TPM1-206ENST00000358278 CHD9Q3L8U1 2897 aa16.51■□□□□ 0.23
TPM1-206ENST00000358278 CHD7Q9P2D1 2997 aa16.51■□□□□ 0.23
TPM1-206ENST00000358278 LRRIQ3A6PVS8 624 aaPredicted RBP16.5■□□□□ 0.23
TPM1-206ENST00000358278 GRXCR1A8MXD5 290 aa16.5■□□□□ 0.23
TPM1-206ENST00000358278 KCNJ18B7U540 433 aa16.5■□□□□ 0.23
TPM1-206ENST00000358278 TRIM49P0CI25 452 aa16.5■□□□□ 0.23
TPM1-206ENST00000358278 TRIM49CP0CI26 452 aa16.5■□□□□ 0.23
TPM1-206ENST00000358278 MTIF2P46199 727 aaKnown RBP16.5■□□□□ 0.23
TPM1-206ENST00000358278 RABGGTBP53611 331 aa16.5■□□□□ 0.23
TPM1-206ENST00000358278 HTRA4P83105 476 aaPredicted RBP16.5■□□□□ 0.23
TPM1-206ENST00000358278 KCNJ12Q14500 433 aa16.5■□□□□ 0.23
TPM1-206ENST00000358278 SPOUT1Q5T280 376 aaKnown RBP16.5■□□□□ 0.23
TPM1-206ENST00000358278 LMBRD2Q68DH5 695 aaPredicted RBP16.5■□□□□ 0.23
TPM1-206ENST00000358278 FAM109BQ6ICB4 259 aaPredicted RBP16.5■□□□□ 0.23
TPM1-206ENST00000358278 NT5DC4Q86YG4 428 aa16.5■□□□□ 0.23
TPM1-206ENST00000358278 IRF2BP1Q8IU81 584 aa16.5■□□□□ 0.23
TPM1-206ENST00000358278 EFCAB13Q8IY85 973 aa16.5■□□□□ 0.23
TPM1-206ENST00000358278 CACTINQ8WUQ7 758 aaKnown RBP16.5■□□□□ 0.23
TPM1-206ENST00000358278 BORCS6Q96GS4 357 aa16.5■□□□□ 0.23
TPM1-206ENST00000358278 ANKRD36BP1Q96IX9 119 aa16.5■□□□□ 0.23
TPM1-206ENST00000358278 PPP1R10Q96QC0 940 aaKnown RBP16.5■□□□□ 0.23
TPM1-206ENST00000358278 POP1Q99575 1024 aaKnown RBP16.5■□□□□ 0.23
TPM1-206ENST00000358278 UBQLN1Q9UMX0 589 aaKnown RBP16.5■□□□□ 0.23
TPM1-206ENST00000358278 ZC3H11AO75152 810 aaKnown RBP eCLIP16.5■□□□□ 0.23
TPM1-206ENST00000358278 CDK11BP21127 795 aaKnown RBP16.5■□□□□ 0.23
TPM1-206ENST00000358278 MARSP56192 900 aaKnown RBP16.5■□□□□ 0.23
TPM1-206ENST00000358278 DLG4P78352 724 aa16.5■□□□□ 0.23
TPM1-206ENST00000358278 CDKAL1Q5VV42 579 aa16.5■□□□□ 0.23
TPM1-206ENST00000358278 RNF214Q8ND24 703 aa16.5■□□□□ 0.23
TPM1-206ENST00000358278 ANKRD20A12PQ8NF67 263 aa16.5■□□□□ 0.23
TPM1-206ENST00000358278 BEST2Q8NFU1 509 aa16.5■□□□□ 0.23
TPM1-206ENST00000358278 PLEKHO2Q8TD55 490 aa16.5■□□□□ 0.23
TPM1-206ENST00000358278 MTMR12Q9C0I1 747 aa16.5■□□□□ 0.23
TPM1-206ENST00000358278 PRO3102Q9H379 93 aa16.5■□□□□ 0.23
TPM1-206ENST00000358278 MMRN2Q9H8L6 949 aa16.5■□□□□ 0.23
TPM1-206ENST00000358278 PTPRJQ12913 1337 aa16.49■□□□□ 0.23
TPM1-206ENST00000358278 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.49■□□□□ 0.23
TPM1-206ENST00000358278 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.49■□□□□ 0.23
TPM1-206ENST00000358278 TNNC2P02585 160 aa16.49■□□□□ 0.23
TPM1-206ENST00000358278 EEF1GP26641 437 aaKnown RBP16.49■□□□□ 0.23
TPM1-206ENST00000358278 ENPEPQ07075 957 aa16.49■□□□□ 0.23
TPM1-206ENST00000358278 TUSC3Q13454 348 aa16.49■□□□□ 0.23
TPM1-206ENST00000358278 DUOXA2Q1HG44 320 aa16.49■□□□□ 0.23
TPM1-206ENST00000358278 TCP11X2Q5H9J9 407 aa16.49■□□□□ 0.23
TPM1-206ENST00000358278 PRPF38BQ5VTL8 546 aaKnown RBP16.49■□□□□ 0.23
TPM1-206ENST00000358278 C18orf25Q96B23 403 aaPredicted RBP16.49■□□□□ 0.23
TPM1-206ENST00000358278 INTS13Q9NVM9 706 aa16.49■□□□□ 0.23
TPM1-206ENST00000358278 TUBGCP4Q9UGJ1 667 aa16.49■□□□□ 0.23
TPM1-206ENST00000358278 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.49■□□□□ 0.23
TPM1-206ENST00000358278 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.49■□□□□ 0.23
TPM1-206ENST00000358278 CASTOR2A6NHX0 329 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 STX10O60499 249 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 PRKCSHP14314 528 aaPredicted RBP16.48■□□□□ 0.23
TPM1-206ENST00000358278 ZNF280BQ86YH2 543 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 TRIM59Q8IWR1 403 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 FIBCD1Q8N539 461 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 OR5B17Q8NGF7 314 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 FAM84AQ96KN4 292 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 GOLGA2P5Q9HBQ8 144 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 HCSTQ9UBK5 93 aa16.48■□□□□ 0.23
TPM1-206ENST00000358278 CDH23Q9H251 3354 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms