RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 F8VZ95 297 aa4.34□□□□□ -1.71
SYNE2-204ENST00000358025 EEF1DP29692 281 aaKnown RBP4.34□□□□□ -1.71
SYNE2-204ENST00000358025 PTDSS1P48651 473 aaKnown RBP4.34□□□□□ -1.71
SYNE2-204ENST00000358025 RNASE9P60153 205 aaKnown RBP4.34□□□□□ -1.71
SYNE2-204ENST00000358025 XXYLT1Q8NBI6 393 aa4.34□□□□□ -1.71
SYNE2-204ENST00000358025 TBCKQ8TEA7 893 aa4.34□□□□□ -1.71
SYNE2-204ENST00000358025 ACAP3Q96P50 834 aa4.34□□□□□ -1.71
SYNE2-204ENST00000358025 CLUHO75153 1309 aa4.34□□□□□ -1.71
SYNE2-204ENST00000358025 POTEB3A0JP26 581 aa4.34□□□□□ -1.71
SYNE2-204ENST00000358025 WDR46O15213 610 aaKnown RBP4.34□□□□□ -1.71
SYNE2-204ENST00000358025 SRGAP2BP0DMP2 458 aa4.34□□□□□ -1.71
SYNE2-204ENST00000358025 HOXB8P17481 243 aaPredicted RBP4.34□□□□□ -1.71
SYNE2-204ENST00000358025 RFX5P48382 616 aaPredicted RBP4.34□□□□□ -1.71
SYNE2-204ENST00000358025 CDC42EP1Q00587 391 aa4.34□□□□□ -1.71
SYNE2-204ENST00000358025 POTEBQ6S5H4 581 aa4.34□□□□□ -1.71
SYNE2-204ENST00000358025 VAT1LQ9HCJ6 419 aa4.34□□□□□ -1.71
SYNE2-204ENST00000358025 AGLP35573 1532 aa4.34□□□□□ -1.71
SYNE2-204ENST00000358025 STX3Q13277 289 aa4.34□□□□□ -1.71
SYNE2-204ENST00000358025 BRD8Q9H0E9 1235 aa4.34□□□□□ -1.71
SYNE2-204ENST00000358025 TRPC5OSA6NMA1 111 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 LRRN2O75325 713 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 SMNDC1O75940 238 aaKnown RBP eCLIP4.34□□□□□ -1.72
SYNE2-204ENST00000358025 MYBP10242 640 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 ZNF135P52742 658 aaPredicted RBP4.34□□□□□ -1.72
SYNE2-204ENST00000358025 C11orf91Q3C1V1 193 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 SLC13A5Q86YT5 568 aaPredicted RBP4.34□□□□□ -1.72
SYNE2-204ENST00000358025 SCUBE1Q8IWY4 988 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 KIAA1257Q9ULG3 409 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 ANKRD33BA6NCL7 494 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 GJB6O95452 261 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 SLC1A4P43007 532 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 EFNA5P52803 228 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 ODR4Q5SWX8 454 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 PRR23BQ6ZRT6 265 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 PTPRN2Q92932 1015 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 RBM15Q96T37 977 aaKnown RBP eCLIP4.34□□□□□ -1.72
SYNE2-204ENST00000358025 PCDH9Q9HC56 1237 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 PCDHA3Q9Y5H8 950 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 KAT6AQ92794 2004 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 MROH7-TTC4A0A0A0MT08 1334 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 MAGEB16A2A368 324 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 ZNF185O15231 689 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 LPXNO60711 386 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 RAP1GAPP47736 663 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 ZCCHC9Q8N567 271 aaKnown RBP4.34□□□□□ -1.72
SYNE2-204ENST00000358025 RIT2Q99578 217 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 NAALADL1Q9UQQ1 740 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 NR2E3Q9Y5X4 410 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 TROAPQ12815 778 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 MESDQ14696 234 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 PDCD4Q53EL6 469 aaKnown RBP4.34□□□□□ -1.72
SYNE2-204ENST00000358025 DMTF1Q9Y222 760 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 HMOX2P30519 316 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 TNNI2P48788 182 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 STX5Q13190 355 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 SEC23AQ15436 765 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 TTC39BQ5VTQ0 682 aaPredicted RBP4.34□□□□□ -1.72
SYNE2-204ENST00000358025 RAB26Q9ULW5 256 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 POLIQ9UNA4 740 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 C10orf71Q711Q0 1435 aa4.34□□□□□ -1.72
SYNE2-204ENST00000358025 VCLP18206 1134 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 CIAPIN1Q6FI81 312 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 PNPT1Q8TCS8 783 aaKnown RBP4.33□□□□□ -1.72
SYNE2-204ENST00000358025 TRIM63Q969Q1 353 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 MS4A14Q96JA4 679 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 PCDHA1Q9Y5I3 950 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 HGSO14964 777 aaPredicted RBP4.33□□□□□ -1.72
SYNE2-204ENST00000358025 FAM200BP0CF97 657 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 MAGEA4P43358 317 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 NET1Q7Z628 596 aaPredicted RBP4.33□□□□□ -1.72
SYNE2-204ENST00000358025 FBXO11Q86XK2 927 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 ERI1Q8IV48 349 aaKnown RBP4.33□□□□□ -1.72
SYNE2-204ENST00000358025 VPS39Q96JC1 886 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 TRIM31Q9BZY9 425 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 LACRTQ9GZZ8 138 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 KCNQ5Q9NR82 932 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 ZBTB5O15062 677 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 GAS7O60861 476 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 COPZ1P61923 177 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 STILQ15468 1287 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 BOLA3Q53S33 107 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 MCPH1Q8NEM0 835 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 EDC3Q96F86 508 aaKnown RBP4.33□□□□□ -1.72
SYNE2-204ENST00000358025 PRMT1Q99873 361 aaKnown RBP4.33□□□□□ -1.72
SYNE2-204ENST00000358025 TEKT3Q9BXF9 490 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 METTL5Q9NRN9 209 aaKnown RBP4.33□□□□□ -1.72
SYNE2-204ENST00000358025 ANGPTL3Q9Y5C1 460 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 LRRIQ1Q96JM4 1722 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 ABCA6Q8N139 1617 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 COPEO14579 308 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 GALCP54803 685 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 TBC1D16Q8TBP0 767 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 S100ZQ8WXG8 99 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 KATNAL1Q9BW62 490 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 RABGEF1Q9UJ41 708 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 KIAA1024Q9UPX6 916 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 NEU2Q9Y3R4 380 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 CAND2O75155 1236 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 APOEP02649 317 aa4.33□□□□□ -1.72
SYNE2-204ENST00000358025 PSMC3P17980 439 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms