RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 SLC47A2Q86VL8 602 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 COL23A1Q86Y22 540 aaPredicted RBP8.78□□□□□ -1
CDC42SE1-201ENST00000357235 SLC13A5Q86YT5 568 aaPredicted RBP8.78□□□□□ -1
CDC42SE1-201ENST00000357235 CERS5Q8N5B7 392 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 ZSWIM2Q8NEG5 633 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 ZNF564Q8TBZ8 553 aaPredicted RBP8.78□□□□□ -1
CDC42SE1-201ENST00000357235 C9orf72Q96LT7 481 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 FAM20AQ96MK3 541 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 TRAPPC9Q96Q05 1148 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 ZMYM2Q9UBW7 1377 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 CNTNAP4Q9C0A0 1308 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 MIF4GDA9UHW6 222 aaKnown RBP8.78□□□□□ -1
CDC42SE1-201ENST00000357235 BHMG1C9JSJ3 638 aaPredicted RBP8.78□□□□□ -1
CDC42SE1-201ENST00000357235 GAP43P17677 238 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 ATP6V1C1P21283 382 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 NOVP48745 357 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 STXBP4Q6ZWJ1 553 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 PRUNE1Q86TP1 453 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 LONP2Q86WA8 852 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 FITM2Q8N6M3 262 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 CBWD1Q9BRT8 395 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 VCX3BQ9H321 246 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 DNAJC18Q9H819 358 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 ETNK1Q9HBU6 452 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 VCX3AQ9NNX9 186 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 OLFML3Q9NRN5 406 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 NKIRAS1Q9NYS0 192 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 KLHL14Q9P2G3 628 aa8.78□□□□□ -1
CDC42SE1-201ENST00000357235 ZNF219Q9P2Y4 722 aaPredicted RBP8.78□□□□□ -1
CDC42SE1-201ENST00000357235 GAKO14976 1311 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 CYP3A7-CYP3A51PA0A087WV96 503 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 PFDN1O60925 122 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 SPAG7O75391 227 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 KRT5P13647 590 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 CYP3A7P24462 503 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 COPS2P61201 443 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 PPP3CAQ08209 521 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 CC2D2BQ6DHV5 1058 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 VSIG1Q86XK7 387 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 FAM84AQ96KN4 292 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 RMDN2Q96LZ7 410 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 RUNDC3BQ96NL0 473 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 PCDHB18PQ96TA0 734 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 OCEL1Q9H607 264 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 SCOCQ9UIL1 159 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 VAV3Q9UKW4 847 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 TMCO1Q9UM00 188 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 DDX60LQ5H9U9 1706 aaKnown RBP8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 DDTLA6NHG4 134 aaPredicted RBP8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 H0Y3Z8 333 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 NDUFB10O96000 172 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 SSTR3P32745 418 aaPredicted RBP8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 ZNF131P52739 623 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 RNASELQ05823 741 aaKnown RBP8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 TMED2Q15363 201 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 BMT2Q1RMZ1 405 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 TSNAXIP1Q2TAA8 658 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 RBM26Q5T8P6 1007 aaKnown RBP8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 ZNF449Q6P9G9 518 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 C1orf186Q6ZWK4 172 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 SEPT12Q8IYM1 358 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 OLIG1Q8TAK6 271 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 TEKT1Q969V4 418 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 TSPYL2Q9H2G4 693 aaPredicted RBP8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 RANBP17Q9H2T7 1088 aaKnown RBP8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 CHST7Q9NS84 486 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 WRAP73Q9P2S5 460 aaPredicted RBP8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 PCYOX1Q9UHG3 505 aa8.77□□□□□ -1.01
CDC42SE1-201ENST00000357235 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 PENKP01210 267 aaPredicted RBP8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 FAM200BP0CF97 657 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 PAX3P23760 479 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 SREBF1P36956 1147 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 VAMP7P51809 220 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 ITGA8P53708 1063 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 MIGA2Q7L4E1 593 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 GSTA5Q7RTV2 222 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 NOP9Q86U38 636 aaKnown RBP8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 GBP7Q8N8V2 638 aaPredicted RBP8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 TMEM237Q96Q45 408 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 WDR18Q9BV38 432 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 PPP1R12CQ9BZL4 782 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 DBNDD1Q9H9R9 158 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 KCNQ5Q9NR82 932 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 CNOT7Q9UIV1 285 aaKnown RBP8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 ANAPC7Q9UJX3 599 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 NAV1Q8NEY1 1877 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 TMEM150BA6NC51 233 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 SERPINB2P05120 415 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 GSTA2P09210 222 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 HSPA6P17066 643 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 MXI1P50539 228 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 RAD23BP54727 409 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 DRG2P55039 364 aaKnown RBP8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 MPP2Q14168 576 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 RRP1BQ14684 758 aaKnown RBP8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 SYDE2Q5VT97 1194 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 LLGL2Q6P1M3 1020 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 CEP128Q6ZU80 1094 aa8.76□□□□□ -1.01
CDC42SE1-201ENST00000357235 INTS8Q75QN2 995 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms