RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 CYP3A5P20815 502 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 DSC1Q08554 894 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 TMEM132DQ14C87 1099 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 JADE1Q6IE81 842 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 ZNF280BQ86YH2 543 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 CACTINQ8WUQ7 758 aaKnown RBP16.85■□□□□ 0.29
TRIM13-201ENST00000356017 TIFAQ96CG3 184 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 EEF2KMTQ96G04 330 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 TMEM175Q9BSA9 504 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 CXCL16Q9H2A7 254 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 CWH43Q9H720 699 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 NRDE2Q9H7Z3 1164 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 METTL14Q9HCE5 456 aaKnown RBP16.85■□□□□ 0.29
TRIM13-201ENST00000356017 PDE11AQ9HCR9 933 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 ZC3H11AO75152 810 aaKnown RBP eCLIP16.85■□□□□ 0.29
TRIM13-201ENST00000356017 DDHD2O94830 711 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 CAVIN2O95810 425 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 ZBTB6Q15916 424 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 PPP2R2DQ66LE6 453 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 COLGALT2Q8IYK4 626 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 BEST2Q8NFU1 509 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 ENOX1Q8TC92 643 aaKnown RBP16.85■□□□□ 0.29
TRIM13-201ENST00000356017 TMC2Q8TDI7 906 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 CCDC127Q96BQ5 260 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 DDX27Q96GQ7 796 aaKnown RBP16.85■□□□□ 0.29
TRIM13-201ENST00000356017 UROC1Q96N76 676 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 TGS1Q96RS0 853 aaKnown RBP16.85■□□□□ 0.29
TRIM13-201ENST00000356017 FUCA2Q9BTY2 467 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 SRRTQ9BXP5 876 aaKnown RBP16.85■□□□□ 0.29
TRIM13-201ENST00000356017 DNAJC25Q9H1X3 360 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 NKX2-4Q9H2Z4 354 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 PCDHB12Q9Y5F1 795 aa16.85■□□□□ 0.29
TRIM13-201ENST00000356017 TNNI1P19237 187 aa16.84■□□□□ 0.29
TRIM13-201ENST00000356017 AP3M2P53677 418 aa16.84■□□□□ 0.29
TRIM13-201ENST00000356017 SPAG1Q07617 926 aa16.84■□□□□ 0.29
TRIM13-201ENST00000356017 NAB2Q15742 525 aa16.84■□□□□ 0.29
TRIM13-201ENST00000356017 ANO6Q4KMQ2 910 aa16.84■□□□□ 0.29
TRIM13-201ENST00000356017 SPATA1Q5VX52 437 aa16.84■□□□□ 0.29
TRIM13-201ENST00000356017 C11orf57Q6ZUT1 292 aaPredicted RBP16.84■□□□□ 0.29
TRIM13-201ENST00000356017 WDR49Q8IV35 697 aa16.84■□□□□ 0.29
TRIM13-201ENST00000356017 PARD3BQ8TEW8 1205 aa16.84■□□□□ 0.29
TRIM13-201ENST00000356017 ZNF558Q96NG5 402 aa16.84■□□□□ 0.29
TRIM13-201ENST00000356017 MED15Q96RN5 788 aa16.84■□□□□ 0.29
TRIM13-201ENST00000356017 PLVAPQ9BX97 442 aa16.84■□□□□ 0.29
TRIM13-201ENST00000356017 TMEM265A0A087WTH1 108 aa16.83■□□□□ 0.28
TRIM13-201ENST00000356017 IKBKBO14920 756 aa16.83■□□□□ 0.28
TRIM13-201ENST00000356017 RB1P06400 928 aa16.83■□□□□ 0.28
TRIM13-201ENST00000356017 NFICP08651 508 aa16.83■□□□□ 0.28
TRIM13-201ENST00000356017 DLATP10515 647 aaKnown RBP16.83■□□□□ 0.28
TRIM13-201ENST00000356017 RPL9P32969 192 aaKnown RBP16.83■□□□□ 0.28
TRIM13-201ENST00000356017 PPM1AP35813 382 aa16.83■□□□□ 0.28
TRIM13-201ENST00000356017 BMPR1AP36894 532 aa16.83■□□□□ 0.28
TRIM13-201ENST00000356017 VAMP7P51809 220 aa16.83■□□□□ 0.28
TRIM13-201ENST00000356017 BCAR1P56945 870 aa16.83■□□□□ 0.28
TRIM13-201ENST00000356017 TFAMQ00059 246 aaKnown RBP16.83■□□□□ 0.28
TRIM13-201ENST00000356017 TAP1Q03518 808 aa16.83■□□□□ 0.28
TRIM13-201ENST00000356017 BFSP1Q12934 665 aa16.83■□□□□ 0.28
TRIM13-201ENST00000356017 DUOXA2Q1HG44 320 aa16.83■□□□□ 0.28
TRIM13-201ENST00000356017 KCNT2Q6UVM3 1135 aa16.83■□□□□ 0.28
TRIM13-201ENST00000356017 FRMD5Q7Z6J6 570 aa16.83■□□□□ 0.28
TRIM13-201ENST00000356017 ANKRD36BP1Q96IX9 119 aa16.83■□□□□ 0.28
TRIM13-201ENST00000356017 BPIFA3Q9BQP9 254 aa16.83■□□□□ 0.28
TRIM13-201ENST00000356017 ANP32EQ9BTT0 268 aa16.83■□□□□ 0.28
TRIM13-201ENST00000356017 DNAJB4Q9UDY4 337 aa16.83■□□□□ 0.28
TRIM13-201ENST00000356017 ARMCX3Q9UH62 379 aaPredicted RBP16.83■□□□□ 0.28
TRIM13-201ENST00000356017 FAN1Q9Y2M0 1017 aa16.83■□□□□ 0.28
TRIM13-201ENST00000356017 FNDC1Q4ZHG4 1894 aaPredicted RBP16.83■□□□□ 0.28
TRIM13-201ENST00000356017 TNNC2P02585 160 aa16.82■□□□□ 0.28
TRIM13-201ENST00000356017 GALTP07902 379 aa16.82■□□□□ 0.28
TRIM13-201ENST00000356017 TMEM191BP0C7N4 346 aa16.82■□□□□ 0.28
TRIM13-201ENST00000356017 LINC00271P0C7V0 271 aa16.82■□□□□ 0.28
TRIM13-201ENST00000356017 OR1G1P47890 313 aa16.82■□□□□ 0.28
TRIM13-201ENST00000356017 MCCD1P59942 119 aaPredicted RBP16.82■□□□□ 0.28
TRIM13-201ENST00000356017 ERVK-21P61565 698 aa16.82■□□□□ 0.28
TRIM13-201ENST00000356017 CLDN10P78369 228 aa16.82■□□□□ 0.28
TRIM13-201ENST00000356017 CCDC40Q4G0X9 1142 aa16.82■□□□□ 0.28
TRIM13-201ENST00000356017 FAM114A1Q8IWE2 563 aa16.82■□□□□ 0.28
TRIM13-201ENST00000356017 EFCAB13Q8IY85 973 aa16.82■□□□□ 0.28
TRIM13-201ENST00000356017 COLGALT1Q8NBJ5 622 aa16.82■□□□□ 0.28
TRIM13-201ENST00000356017 BORCS6Q96GS4 357 aa16.82■□□□□ 0.28
TRIM13-201ENST00000356017 CGRRF1Q99675 332 aa16.82■□□□□ 0.28
TRIM13-201ENST00000356017 COLEC11Q9BWP8 271 aa16.82■□□□□ 0.28
TRIM13-201ENST00000356017 GZF1Q9H116 711 aaPredicted RBP16.82■□□□□ 0.28
TRIM13-201ENST00000356017 THAP9Q9H5L6 903 aa16.82■□□□□ 0.28
TRIM13-201ENST00000356017 INTS13Q9NVM9 706 aa16.82■□□□□ 0.28
TRIM13-201ENST00000356017 HCSTQ9UBK5 93 aa16.82■□□□□ 0.28
TRIM13-201ENST00000356017 C5orf67F2Z3F1 127 aa16.81■□□□□ 0.28
TRIM13-201ENST00000356017 NRP1O14786 923 aa16.81■□□□□ 0.28
TRIM13-201ENST00000356017 STX10O60499 249 aa16.81■□□□□ 0.28
TRIM13-201ENST00000356017 LRPAP1P30533 357 aa16.81■□□□□ 0.28
TRIM13-201ENST00000356017 CTNNB1P35222 781 aa16.81■□□□□ 0.28
TRIM13-201ENST00000356017 ZNF165P49910 485 aa16.81■□□□□ 0.28
TRIM13-201ENST00000356017 MARSP56192 900 aaKnown RBP16.81■□□□□ 0.28
TRIM13-201ENST00000356017 WNT7BP56706 349 aa16.81■□□□□ 0.28
TRIM13-201ENST00000356017 MYL5Q02045 173 aa16.81■□□□□ 0.28
TRIM13-201ENST00000356017 HABP4Q5JVS0 413 aaKnown RBP16.81■□□□□ 0.28
TRIM13-201ENST00000356017 C18orf25Q96B23 403 aaPredicted RBP16.81■□□□□ 0.28
TRIM13-201ENST00000356017 DPP3Q9NY33 737 aa16.81■□□□□ 0.28
TRIM13-201ENST00000356017 SPG21Q9NZD8 308 aa16.81■□□□□ 0.28
TRIM13-201ENST00000356017 STK39Q9UEW8 545 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms