RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 NUMBLQ9Y6R0 609 aa15.88■□□□□ 0.13
PRPF40A-201ENST00000354363 FANCMQ8IYD8 2048 aa15.88■□□□□ 0.13
PRPF40A-201ENST00000354363 CACNA1IQ9P0X4 2223 aa15.88■□□□□ 0.13
PRPF40A-201ENST00000354363 SMIM28A0A1B0GU29 152 aa15.87■□□□□ 0.13
PRPF40A-201ENST00000354363 STK25O00506 426 aa15.87■□□□□ 0.13
PRPF40A-201ENST00000354363 LAD1O00515 517 aa15.87■□□□□ 0.13
PRPF40A-201ENST00000354363 TKTP29401 623 aaKnown RBP15.87■□□□□ 0.13
PRPF40A-201ENST00000354363 OR1D2P34982 312 aa15.87■□□□□ 0.13
PRPF40A-201ENST00000354363 PRPHP41219 470 aa15.87■□□□□ 0.13
PRPF40A-201ENST00000354363 MAPK7Q13164 816 aa15.87■□□□□ 0.13
PRPF40A-201ENST00000354363 DMP1Q13316 513 aaPredicted RBP15.87■□□□□ 0.13
PRPF40A-201ENST00000354363 UPP1Q16831 310 aa15.87■□□□□ 0.13
PRPF40A-201ENST00000354363 ZNF568Q3ZCX4 644 aa15.87■□□□□ 0.13
PRPF40A-201ENST00000354363 C8orf34Q49A92 452 aa15.87■□□□□ 0.13
PRPF40A-201ENST00000354363 XKR4Q5GH76 650 aa15.87■□□□□ 0.13
PRPF40A-201ENST00000354363 RINT1Q6NUQ1 792 aa15.87■□□□□ 0.13
PRPF40A-201ENST00000354363 ALKAL1Q6UXT8 129 aa15.87■□□□□ 0.13
PRPF40A-201ENST00000354363 C1orf186Q6ZWK4 172 aa15.87■□□□□ 0.13
PRPF40A-201ENST00000354363 KCNK18Q7Z418 384 aa15.87■□□□□ 0.13
PRPF40A-201ENST00000354363 C3orf58Q8NDZ4 430 aa15.87■□□□□ 0.13
PRPF40A-201ENST00000354363 GPR152Q8TDT2 470 aa15.87■□□□□ 0.13
PRPF40A-201ENST00000354363 CCDC94Q9BW85 323 aaPredicted RBP15.87■□□□□ 0.13
PRPF40A-201ENST00000354363 MRPL4Q9BYD3 311 aaKnown RBP15.87■□□□□ 0.13
PRPF40A-201ENST00000354363 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.87■□□□□ 0.13
PRPF40A-201ENST00000354363 CDH7Q9ULB5 785 aa15.87■□□□□ 0.13
PRPF40A-201ENST00000354363 PRR23AA6NEV1 266 aa15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 BRCC3P46736 316 aa15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 YARSP54577 528 aaKnown RBP15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 OSTNP61366 133 aa15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 SOX4Q06945 474 aaPredicted RBP15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 ANGPT1Q15389 498 aa15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 UVSSAQ2YD98 709 aa15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 AXDND1Q5T1B0 1012 aaPredicted RBP15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 RSPO2Q6UXX9 243 aaPredicted RBP15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 DTHD1Q6ZMT9 781 aa15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 FRMD5Q7Z6J6 570 aa15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 SLC7A14Q8TBB6 771 aa15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 DDX27Q96GQ7 796 aaKnown RBP15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 DRC1Q96MC2 740 aa15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 RPP25Q9BUL9 199 aaKnown RBP15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 TARS2Q9BW92 718 aaKnown RBP15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 TBC1D17Q9HA65 648 aa15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 KMT5AQ9NQR1 393 aa15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 SLC2A4RGQ9NR83 387 aa15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 POLIQ9UNA4 740 aa15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 CDY1Q9Y6F8 540 aa15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 I3L4J1 428 aa15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 ABLIM1O14639 778 aa15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 XYLBO75191 536 aa15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 POU2F2P09086 479 aa15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 FGF14Q92915 247 aa15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 ZMAT2Q96NC0 199 aaKnown RBP15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 TOPORSQ9NS56 1045 aaPredicted RBP15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 RBM19Q9Y4C8 960 aaKnown RBP15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 BACE2Q9Y5Z0 518 aa15.86■□□□□ 0.13
PRPF40A-201ENST00000354363 TRAPPC3O43617 180 aa15.85■□□□□ 0.13
PRPF40A-201ENST00000354363 RFX1P22670 979 aa15.85■□□□□ 0.13
PRPF40A-201ENST00000354363 PROZP22891 400 aa15.85■□□□□ 0.13
PRPF40A-201ENST00000354363 PHLDB3Q6NSJ2 640 aa15.85■□□□□ 0.13
PRPF40A-201ENST00000354363 PARM1Q6UWI2 310 aa15.85■□□□□ 0.13
PRPF40A-201ENST00000354363 ANKS3Q6ZW76 656 aa15.85■□□□□ 0.13
PRPF40A-201ENST00000354363 ITFG1Q8TB96 612 aa15.85■□□□□ 0.13
PRPF40A-201ENST00000354363 FGF13Q92913 245 aa15.85■□□□□ 0.13
PRPF40A-201ENST00000354363 SNX27Q96L92 541 aa15.85■□□□□ 0.13
PRPF40A-201ENST00000354363 C17orf75Q9HAS0 396 aa15.85■□□□□ 0.13
PRPF40A-201ENST00000354363 ARHGEF3Q9NR81 526 aa15.85■□□□□ 0.13
PRPF40A-201ENST00000354363 HCFC1R1Q9NWW0 138 aa15.85■□□□□ 0.13
PRPF40A-201ENST00000354363 SFI1A8K8P3 1242 aa15.84■□□□□ 0.13
PRPF40A-201ENST00000354363 SLC16A4O15374 487 aa15.84■□□□□ 0.13
PRPF40A-201ENST00000354363 MCF2P10911 925 aa15.84■□□□□ 0.13
PRPF40A-201ENST00000354363 KCNE1P15382 129 aa15.84■□□□□ 0.13
PRPF40A-201ENST00000354363 GUCY2CP25092 1073 aa15.84■□□□□ 0.13
PRPF40A-201ENST00000354363 ATP2C1P98194 919 aaPredicted RBP15.84■□□□□ 0.13
PRPF40A-201ENST00000354363 HYIQ5T013 277 aa15.84■□□□□ 0.13
PRPF40A-201ENST00000354363 MPZL3Q6UWV2 235 aa15.84■□□□□ 0.13
PRPF40A-201ENST00000354363 RTL10Q7L3V2 364 aa15.84■□□□□ 0.13
PRPF40A-201ENST00000354363 NKD2Q969F2 451 aaPredicted RBP15.84■□□□□ 0.13
PRPF40A-201ENST00000354363 ACAP3Q96P50 834 aa15.84■□□□□ 0.13
PRPF40A-201ENST00000354363 TIPINQ9BVW5 301 aa15.84■□□□□ 0.13
PRPF40A-201ENST00000354363 SLC38A7Q9NVC3 462 aa15.84■□□□□ 0.13
PRPF40A-201ENST00000354363 DNMT3BQ9UBC3 853 aaKnown RBP15.84■□□□□ 0.13
PRPF40A-201ENST00000354363 ANK1P16157 1881 aa15.84■□□□□ 0.13
PRPF40A-201ENST00000354363 PODXLO00592 558 aa15.83■□□□□ 0.13
PRPF40A-201ENST00000354363 MEFVO15553 781 aaPredicted RBP15.83■□□□□ 0.13
PRPF40A-201ENST00000354363 GPC5P78333 572 aa15.83■□□□□ 0.13
PRPF40A-201ENST00000354363 ZRSR1Q15695 479 aaKnown RBP15.83■□□□□ 0.13
PRPF40A-201ENST00000354363 RILPL1Q5EBL4 403 aa15.83■□□□□ 0.13
PRPF40A-201ENST00000354363 MCTP1Q6DN14 999 aa15.83■□□□□ 0.13
PRPF40A-201ENST00000354363 ZBTB45Q96K62 511 aaPredicted RBP15.83■□□□□ 0.13
PRPF40A-201ENST00000354363 PNMA5Q96PV4 448 aa15.83■□□□□ 0.13
PRPF40A-201ENST00000354363 NTPCRQ9BSD7 190 aaKnown RBP15.83■□□□□ 0.13
PRPF40A-201ENST00000354363 TCHPQ9BT92 498 aa15.83■□□□□ 0.13
PRPF40A-201ENST00000354363 CNTN3Q9P232 1028 aa15.83■□□□□ 0.13
PRPF40A-201ENST00000354363 KIF3AQ9Y496 699 aa15.83■□□□□ 0.13
PRPF40A-201ENST00000354363 COL4A3Q01955 1670 aa15.83■□□□□ 0.13
PRPF40A-201ENST00000354363 HARSP12081 509 aaKnown RBP15.83■□□□□ 0.12
PRPF40A-201ENST00000354363 ROR1Q01973 937 aa15.83■□□□□ 0.12
PRPF40A-201ENST00000354363 RAD51AP2Q09MP3 1159 aa15.83■□□□□ 0.12
PRPF40A-201ENST00000354363 RABEP1Q15276 862 aa15.83■□□□□ 0.12
PRPF40A-201ENST00000354363 PABPC1LQ4VXU2 614 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms