RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 ANKRD20A2Q5SQ80 823 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 ANKRD20A1Q5TYW2 823 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 FAM96AQ9H5X1 160 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 SLC30A1Q9Y6M5 507 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 ANO9A1A5B4 782 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 SLC1A1P43005 524 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 HABP4Q5JVS0 413 aaKnown RBP11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 ANKRD40Q6AI12 368 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 PABPC5Q96DU9 382 aaKnown RBP11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 SPATA17Q96L03 361 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 UPF3AQ9H1J1 476 aaKnown RBP11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 PDE11AQ9HCR9 933 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 GTSE1Q9NYZ3 720 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 ZNF609O15014 1411 aa11.86□□□□□ -0.51
SLC6A20-201ENST00000353278 CFAP99D6REC4 459 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 B3GAT3O94766 335 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 SLC26A2P50443 739 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 NPEPPSP55786 919 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 TBCCQ15814 346 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 C10orf120Q5SQS8 335 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 PPM1NQ8N819 430 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 SERPINI1Q99574 410 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 TARS2Q9BW92 718 aaKnown RBP11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 PDHXO00330 501 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 RTN2O75298 545 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 PGK2P07205 417 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 FAM200BP0CF97 657 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 MAP4P27816 1152 aaKnown RBP11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 GNL1P36915 607 aaPredicted RBP11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 GPS1Q13098 491 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 TRIM59Q8IWR1 403 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 CCNYL1Q8N7R7 359 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 TACO1Q9BSH4 297 aaKnown RBP11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 EHD4Q9H223 541 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 FAM49BQ9NUQ9 324 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 ABI2Q9NYB9 513 aaPredicted RBP11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 AIPL1Q9NZN9 384 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 APEX2Q9UBZ4 518 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 TRIM17Q9Y577 477 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 A0A1W2PQC6 194 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 F5H423 210 aaPredicted RBP11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 GOLGA8MH3BSY2 632 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 STRNO43815 780 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 HIST1H2AGP0C0S8 130 aaPredicted RBP11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 RALBP11234 206 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 HIST1H2ADP20671 130 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 WASHC5Q12768 1159 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 CD302Q8IX05 232 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 TTC17Q96AE7 1141 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 DACT3Q96B18 629 aaPredicted RBP11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 HIST1H2AHQ96KK5 128 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 HIST1H2AJQ99878 128 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 C7orf25Q9BPX7 421 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 H2AFJQ9BTM1 129 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 NIF3L1Q9GZT8 377 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 CATSPERBQ9H7T0 1116 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 CEP170BQ9Y4F5 1589 aaPredicted RBP11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 EXTL3O43909 919 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 CYP11B2P19099 503 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 CHRNA3P32297 505 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 EMBQ6PCB8 327 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 SHC4Q6S5L8 630 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 ANKS3Q6ZW76 656 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 MFN1Q8IWA4 741 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 SOCS4Q8WXH5 440 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 MAML1Q92585 1016 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 HPDLQ96IR7 371 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 BPIFA3Q9BQP9 254 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 FBXO2Q9UK22 296 aaPredicted RBP11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 TMX2Q9Y320 296 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 ABCA6Q8N139 1617 aa11.85□□□□□ -0.51
SLC6A20-201ENST00000353278 HLA-DRAP01903 254 aa11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 KLRK1P26718 216 aa11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 EDRF1Q3B7T1 1238 aa11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 EFHC1Q5JVL4 640 aa11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 USP50Q70EL3 339 aaPredicted RBP11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 PPHLN1Q8NEY8 458 aaKnown RBP11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 FBXO41Q8TF61 875 aa11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 PPP1R2P1Q96PQ5 205 aa11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 NOVA2Q9UNW9 492 aaKnown RBP11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 EIF3DO15371 548 aaKnown RBP eCLIP11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 EGFRP00533 1210 aa11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 VCAM1P19320 739 aa11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 FMO5P49326 533 aa11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 E2F5Q15329 346 aa11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 ALS2CLQ60I27 953 aa11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 SARM1Q6SZW1 724 aa11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 ACAD11Q709F0 780 aa11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 ZC3H18Q86VM9 953 aaKnown RBP11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 GLIS2Q9BZE0 524 aaPredicted RBP11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 PCDHB12Q9Y5F1 795 aa11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 PIK3R2O00459 728 aa11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 CFLARO15519 480 aa11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 ATP9BO43861 1147 aa11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 SSTR3P32745 418 aaPredicted RBP11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 HERVK_113P62684 666 aa11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 PHEXP78562 749 aa11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 ELAVL2Q12926 359 aaKnown RBP11.84□□□□□ -0.51
SLC6A20-201ENST00000353278 SPARCL1Q14515 664 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms