RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 ZNF473Q8WTR7 871 aaKnown RBP16.91■□□□□ 0.3
PTPN11-201ENST00000351677 KIFC3Q9BVG8 833 aa16.91■□□□□ 0.3
PTPN11-201ENST00000351677 DRC3Q9H069 523 aa16.91■□□□□ 0.3
PTPN11-201ENST00000351677 CYP4F11Q9HBI6 524 aa16.91■□□□□ 0.3
PTPN11-201ENST00000351677 SALL3Q9BXA9 1300 aa16.91■□□□□ 0.3
PTPN11-201ENST00000351677 DAGLBQ8NCG7 672 aa16.91■□□□□ 0.3
PTPN11-201ENST00000351677 KCNH7Q9NS40 1196 aa16.91■□□□□ 0.3
PTPN11-201ENST00000351677 SNX9Q9Y5X1 595 aa16.91■□□□□ 0.3
PTPN11-201ENST00000351677 PITPNM2Q9BZ72 1349 aa16.91■□□□□ 0.3
PTPN11-201ENST00000351677 SLC26A4O43511 780 aa16.91■□□□□ 0.3
PTPN11-201ENST00000351677 PDHA1P08559 390 aa16.91■□□□□ 0.3
PTPN11-201ENST00000351677 SESN2P58004 480 aaPredicted RBP16.91■□□□□ 0.3
PTPN11-201ENST00000351677 BTBD6Q96KE9 485 aa16.91■□□□□ 0.3
PTPN11-201ENST00000351677 SARS2Q9NP81 518 aaKnown RBP16.91■□□□□ 0.3
PTPN11-201ENST00000351677 HPSEQ9Y251 543 aa16.91■□□□□ 0.3
PTPN11-201ENST00000351677 PHF20L1A8MW92 1017 aa16.91■□□□□ 0.3
PTPN11-201ENST00000351677 ASAP2O43150 1006 aa16.91■□□□□ 0.3
PTPN11-201ENST00000351677 MGEA5O60502 916 aa16.91■□□□□ 0.3
PTPN11-201ENST00000351677 JAMLQ86YT9 394 aa16.91■□□□□ 0.3
PTPN11-201ENST00000351677 PARP9Q8IXQ6 854 aa16.91■□□□□ 0.3
PTPN11-201ENST00000351677 FAM151AQ8WW52 585 aa16.91■□□□□ 0.3
PTPN11-201ENST00000351677 ZIM3Q96PE6 472 aa16.91■□□□□ 0.3
PTPN11-201ENST00000351677 ASB14A6NK59 587 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 DFFAO00273 331 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 AGTP01019 485 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 HLA-DRAP01903 254 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 KCNJ1P48048 391 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 USP38Q8NB14 1042 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 TTC8Q8TAM2 541 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 ANKS1AQ92625 1134 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 RUSC1Q9BVN2 902 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 TSPYL2Q9H2G4 693 aaPredicted RBP16.9■□□□□ 0.3
PTPN11-201ENST00000351677 DONSONQ9NYP3 566 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 SUN2Q9UH99 717 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 PIN4Q9Y237 131 aaKnown RBP16.9■□□□□ 0.3
PTPN11-201ENST00000351677 ALG6Q9Y672 507 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 KIAA0391O15091 583 aaKnown RBP16.9■□□□□ 0.3
PTPN11-201ENST00000351677 AP5Z1O43299 807 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 KDELC2Q7Z4H8 507 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 OLA1Q9NTK5 396 aaKnown RBP16.9■□□□□ 0.3
PTPN11-201ENST00000351677 RSPH10B2B2RC85 870 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 MSH4O15457 936 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 SNX2O60749 519 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 RSPH10BP0C881 870 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 PDGFRAP16234 1089 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.9■□□□□ 0.3
PTPN11-201ENST00000351677 ADGRA1Q86SQ6 560 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 CCT8L2Q96SF2 557 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 SPATS2LQ9NUQ6 558 aaKnown RBP16.9■□□□□ 0.3
PTPN11-201ENST00000351677 DUSP10Q9Y6W6 482 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 TMEM253P0C7T8 217 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 CACNB2Q08289 660 aaPredicted RBP16.9■□□□□ 0.3
PTPN11-201ENST00000351677 SPATA21Q7Z572 469 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 ARL8AQ96BM9 186 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 MOV10L1Q9BXT6 1211 aaKnown RBP16.9■□□□□ 0.3
PTPN11-201ENST00000351677 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.9■□□□□ 0.3
PTPN11-201ENST00000351677 TSR3Q9UJK0 312 aaKnown RBP16.9■□□□□ 0.3
PTPN11-201ENST00000351677 GRAP2O75791 330 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 APRTP07741 180 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 CYP2C19P33261 490 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 PPP4CP60510 307 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 MTM1Q13496 603 aa16.9■□□□□ 0.3
PTPN11-201ENST00000351677 SYDE1Q6ZW31 735 aaPredicted RBP16.9■□□□□ 0.3
PTPN11-201ENST00000351677 SPDYE1Q8NFV5 336 aaPredicted RBP16.9■□□□□ 0.3
PTPN11-201ENST00000351677 EIF3HO15372 352 aaKnown RBP eCLIP16.89■□□□□ 0.3
PTPN11-201ENST00000351677 ZFXP17010 805 aaPredicted RBP16.89■□□□□ 0.3
PTPN11-201ENST00000351677 LRIG3Q6UXM1 1119 aa16.89■□□□□ 0.3
PTPN11-201ENST00000351677 PGBD4Q96DM1 585 aa16.89■□□□□ 0.3
PTPN11-201ENST00000351677 HSPA8P11142 646 aaKnown RBP16.89■□□□□ 0.29
PTPN11-201ENST00000351677 PPARGP37231 505 aaPredicted RBP16.89■□□□□ 0.29
PTPN11-201ENST00000351677 ITPRIPL1Q6GPH6 555 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 C4orf33Q8N1A6 199 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 OR6J1Q8NGC5 347 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 UNC45AQ9H3U1 944 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 CYP11B2P19099 503 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 ITIH2P19823 946 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 MXD4Q14582 209 aaPredicted RBP16.89■□□□□ 0.29
PTPN11-201ENST00000351677 AP1ARQ63HQ0 302 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 AGAP3Q96P47 875 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 GCNAQ96QF7 691 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 RIT2Q99578 217 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 SP110Q9HB58 689 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 TMEM8AQ9HCN3 771 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 NEU2Q9Y3R4 380 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 CNTNAP4Q9C0A0 1308 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 NRXN1Q9ULB1 1477 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 MAP2P11137 1827 aaKnown RBP16.89■□□□□ 0.29
PTPN11-201ENST00000351677 SULT1E1P49888 294 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 OR6P1Q8NGX9 317 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 SEPT1Q8WYJ6 367 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 ZNF560Q96MR9 790 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 TRIM33Q9UPN9 1127 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.89■□□□□ 0.29
PTPN11-201ENST00000351677 MED24O75448 989 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 WEE2P0C1S8 567 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 SGSM1Q2NKQ1 1148 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 ST13P4Q8IZP2 240 aaPredicted RBP16.89■□□□□ 0.29
PTPN11-201ENST00000351677 ADGRB1O14514 1584 aa16.89■□□□□ 0.29
PTPN11-201ENST00000351677 TMEM62Q0P6H9 643 aa16.88■□□□□ 0.29
PTPN11-201ENST00000351677 KCNV1Q6PIU1 500 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms