RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 ANKRD36BP1Q96IX9 119 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 IMPG2Q9BZV3 1241 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 MYO1AQ9UBC5 1043 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 ANK1P16157 1881 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 FOXN3O00409 490 aaPredicted RBP20.13■□□□□ 0.81
PTN-201ENST00000348225 TNNC2P02585 160 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 TMEM191BP0C7N4 346 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 PNMA6AP0CW24 399 aaPredicted RBP20.13■□□□□ 0.81
PTN-201ENST00000348225 CXCL8P10145 99 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 FGFR4P22455 802 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 MAGEA1P43355 309 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 SNX17Q15036 470 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 CCDC122Q5T0U0 273 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 C10orf76Q5T2E6 689 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 GDF6Q6KF10 455 aaPredicted RBP20.13■□□□□ 0.81
PTN-201ENST00000348225 SLC27A1Q6PCB7 646 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 CDHR5Q9HBB8 845 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 HMX1Q9NP08 348 aaPredicted RBP20.13■□□□□ 0.81
PTN-201ENST00000348225 DNAI1Q9UI46 699 aa20.13■□□□□ 0.81
PTN-201ENST00000348225 A0A0U1RQJ8 604 aa20.12■□□□□ 0.81
PTN-201ENST00000348225 VNN1O95497 513 aa20.12■□□□□ 0.81
PTN-201ENST00000348225 GRK4P32298 578 aa20.12■□□□□ 0.81
PTN-201ENST00000348225 NCOA4Q13772 614 aa20.12■□□□□ 0.81
PTN-201ENST00000348225 BMS1Q14692 1282 aaKnown RBP20.12■□□□□ 0.81
PTN-201ENST00000348225 ATRIPQ8WXE1 791 aa20.12■□□□□ 0.81
PTN-201ENST00000348225 SHC3Q92529 594 aa20.12■□□□□ 0.81
PTN-201ENST00000348225 KREMEN1Q96MU8 473 aa20.12■□□□□ 0.81
PTN-201ENST00000348225 BEGAINQ9BUH8 593 aa20.12■□□□□ 0.81
PTN-201ENST00000348225 MTMR12Q9C0I1 747 aa20.12■□□□□ 0.81
PTN-201ENST00000348225 ASB7Q9H672 318 aa20.12■□□□□ 0.81
PTN-201ENST00000348225 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.12■□□□□ 0.81
PTN-201ENST00000348225 ADAMTS1Q9UHI8 967 aa20.12■□□□□ 0.81
PTN-201ENST00000348225 R3HCC1Q9Y3T6 440 aaKnown RBP20.12■□□□□ 0.81
PTN-201ENST00000348225 GRM5P41594 1212 aa20.11■□□□□ 0.81
PTN-201ENST00000348225 MRPS6P82932 125 aaKnown RBP20.11■□□□□ 0.81
PTN-201ENST00000348225 TFAMQ00059 246 aaKnown RBP20.11■□□□□ 0.81
PTN-201ENST00000348225 TRAPPC11Q7Z392 1133 aa20.11■□□□□ 0.81
PTN-201ENST00000348225 FAM84AQ96KN4 292 aa20.11■□□□□ 0.81
PTN-201ENST00000348225 ACAP3Q96P50 834 aa20.11■□□□□ 0.81
PTN-201ENST00000348225 PI4K2AQ9BTU6 479 aa20.11■□□□□ 0.81
PTN-201ENST00000348225 CCDC94Q9BW85 323 aaPredicted RBP20.11■□□□□ 0.81
PTN-201ENST00000348225 CELF4Q9BZC1 486 aaKnown RBP20.11■□□□□ 0.81
PTN-201ENST00000348225 MROH7Q68CQ1 1323 aa20.11■□□□□ 0.81
PTN-201ENST00000348225 A0A087X0T9 212 aa20.1■□□□□ 0.81
PTN-201ENST00000348225 MOXD2PA6NHM9 499 aa20.1■□□□□ 0.81
PTN-201ENST00000348225 CLSTN1O94985 981 aa20.1■□□□□ 0.81
PTN-201ENST00000348225 NPTXRO95502 500 aa20.1■□□□□ 0.81
PTN-201ENST00000348225 FAM228BP0C875 321 aa20.1■□□□□ 0.81
PTN-201ENST00000348225 TBXAS1P24557 533 aaPredicted RBP20.1■□□□□ 0.81
PTN-201ENST00000348225 HOXA11P31270 313 aaPredicted RBP20.1■□□□□ 0.81
PTN-201ENST00000348225 SERINC5Q86VE9 423 aa20.1■□□□□ 0.81
PTN-201ENST00000348225 CD302Q8IX05 232 aa20.1■□□□□ 0.81
PTN-201ENST00000348225 TMEM192Q8IY95 271 aa20.1■□□□□ 0.81
PTN-201ENST00000348225 FAM71AQ8IYT1 594 aa20.1■□□□□ 0.81
PTN-201ENST00000348225 KAT5Q92993 513 aa20.1■□□□□ 0.81
PTN-201ENST00000348225 TATDN2Q93075 761 aa20.1■□□□□ 0.81
PTN-201ENST00000348225 GUCA1BQ9UMX6 200 aa20.1■□□□□ 0.81
PTN-201ENST00000348225 TRIM17Q9Y577 477 aa20.1■□□□□ 0.81
PTN-201ENST00000348225 TRPV2Q9Y5S1 764 aa20.1■□□□□ 0.81
PTN-201ENST00000348225 PJA2O43164 708 aa20.09■□□□□ 0.81
PTN-201ENST00000348225 CASQ1P31415 396 aa20.09■□□□□ 0.81
PTN-201ENST00000348225 USP8P40818 1118 aa20.09■□□□□ 0.81
PTN-201ENST00000348225 PTPN11Q06124 597 aaPredicted RBP20.09■□□□□ 0.81
PTN-201ENST00000348225 TRPC3Q13507 836 aa20.09■□□□□ 0.81
PTN-201ENST00000348225 RPAINQ86UA6 219 aa20.09■□□□□ 0.81
PTN-201ENST00000348225 EFCAB13Q8IY85 973 aa20.09■□□□□ 0.81
PTN-201ENST00000348225 TSEN34Q9BSV6 310 aaKnown RBP20.09■□□□□ 0.81
PTN-201ENST00000348225 TRIM6Q9C030 488 aaPredicted RBP20.09■□□□□ 0.81
PTN-201ENST00000348225 PIN4Q9Y237 131 aaKnown RBP20.09■□□□□ 0.81
PTN-201ENST00000348225 LACTBL1A8MY62 500 aa20.09■□□□□ 0.81
PTN-201ENST00000348225 ACLYP53396 1101 aa20.09■□□□□ 0.81
PTN-201ENST00000348225 NOP14P78316 857 aaKnown RBP20.09■□□□□ 0.81
PTN-201ENST00000348225 ZNF569Q5MCW4 686 aa20.09■□□□□ 0.81
PTN-201ENST00000348225 NT5DC4Q86YG4 428 aa20.09■□□□□ 0.81
PTN-201ENST00000348225 TMEM40Q8WWA1 233 aa20.09■□□□□ 0.81
PTN-201ENST00000348225 CDY2AQ9Y6F7 541 aa20.09■□□□□ 0.81
PTN-201ENST00000348225 ATP8B3O60423 1300 aa20.08■□□□□ 0.81
PTN-201ENST00000348225 RALGAPA2Q2PPJ7 1873 aa20.08■□□□□ 0.81
PTN-201ENST00000348225 FRMPD3Q5JV73 1810 aa20.08■□□□□ 0.8
PTN-201ENST00000348225 RCCD1A6NED2 376 aa20.08■□□□□ 0.8
PTN-201ENST00000348225 CUL2Q13617 745 aa20.08■□□□□ 0.8
PTN-201ENST00000348225 NAB2Q15742 525 aa20.08■□□□□ 0.8
PTN-201ENST00000348225 SGSM1Q2NKQ1 1148 aa20.08■□□□□ 0.8
PTN-201ENST00000348225 GLT1D1Q96MS3 346 aa20.08■□□□□ 0.8
PTN-201ENST00000348225 LACRTQ9GZZ8 138 aa20.08■□□□□ 0.8
PTN-201ENST00000348225 TRIM10Q9UDY6 481 aa20.08■□□□□ 0.8
PTN-201ENST00000348225 NAGPAQ9UK23 515 aa20.08■□□□□ 0.8
PTN-201ENST00000348225 PTCH2Q9Y6C5 1203 aa20.08■□□□□ 0.8
PTN-201ENST00000348225 CITO14578 2027 aa20.08■□□□□ 0.8
PTN-201ENST00000348225 ASS1P00966 412 aaKnown RBP20.07■□□□□ 0.8
PTN-201ENST00000348225 TNFAIP3P21580 790 aa20.07■□□□□ 0.8
PTN-201ENST00000348225 YARSP54577 528 aaKnown RBP20.07■□□□□ 0.8
PTN-201ENST00000348225 ITGA7Q13683 1181 aa20.07■□□□□ 0.8
PTN-201ENST00000348225 PTGISQ16647 500 aa20.07■□□□□ 0.8
PTN-201ENST00000348225 SLC10A6Q3KNW5 377 aa20.07■□□□□ 0.8
PTN-201ENST00000348225 JADE1Q6IE81 842 aa20.07■□□□□ 0.8
PTN-201ENST00000348225 ALKBH5Q6P6C2 394 aaKnown RBP20.07■□□□□ 0.8
PTN-201ENST00000348225 SECISBP2LQ93073 1101 aaKnown RBP20.07■□□□□ 0.8
PTN-201ENST00000348225 WDR24Q96S15 920 aa20.07■□□□□ 0.8
PTN-201ENST00000348225 AGPAT1Q99943 283 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms