RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 DDX27Q96GQ7 796 aaKnown RBP6.47□□□□□ -1.37
CLCN3-201ENST00000347613 NTPCRQ9BSD7 190 aaKnown RBP6.47□□□□□ -1.37
CLCN3-201ENST00000347613 PABPC3Q9H361 631 aaKnown RBP6.47□□□□□ -1.37
CLCN3-201ENST00000347613 TMEM206Q9H813 350 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 A1CFQ9NQ94 594 aaKnown RBP6.47□□□□□ -1.37
CLCN3-201ENST00000347613 KMT5AQ9NQR1 393 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 RNF146Q9NTX7 359 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 GTF3C4Q9UKN8 822 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 NUB1Q9Y5A7 615 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 CAPN7Q9Y6W3 813 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 GMNCA6NCL1 334 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 WDR46O15213 610 aaKnown RBP6.47□□□□□ -1.37
CLCN3-201ENST00000347613 MTA2O94776 668 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 ACSL3O95573 720 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 FDX1P10109 184 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 KRT10P13645 584 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 PSEN1P49768 467 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 IFI16Q16666 785 aaKnown RBP6.47□□□□□ -1.37
CLCN3-201ENST00000347613 CYP1B1Q16678 543 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 CLEC16AQ2KHT3 1053 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 MTERF2Q49AM1 385 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 KRT39Q6A163 491 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 ACAD10Q6JQN1 1059 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 ABHD15Q6UXT9 468 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 MCOLN2Q8IZK6 566 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 SEC16BQ96JE7 1060 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 PRMT1Q99873 361 aaKnown RBP6.47□□□□□ -1.37
CLCN3-201ENST00000347613 SAE1Q9UBE0 346 aaPredicted RBP6.47□□□□□ -1.37
CLCN3-201ENST00000347613 AFG3L2Q9Y4W6 797 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 DOCK1Q14185 1865 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 WDR90Q96KV7 1748 aa6.47□□□□□ -1.37
CLCN3-201ENST00000347613 ANK1P16157 1881 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 A0A087WUV0 522 aaPredicted RBP6.46□□□□□ -1.37
CLCN3-201ENST00000347613 PI4K2BG5E9Z4 385 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 PPP1R12BO60237 982 aaPredicted RBP6.46□□□□□ -1.37
CLCN3-201ENST00000347613 KRT5P13647 590 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 PTPRAP18433 802 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 SCP2P22307 547 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 ANXA13P27216 316 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 ACTR2P61160 394 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 PRKCEQ02156 737 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 FASTKD3Q14CZ7 662 aaKnown RBP6.46□□□□□ -1.37
CLCN3-201ENST00000347613 ERMARDQ5T6L9 678 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 CGB2Q6NT52 195 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 CCDC25Q86WR0 208 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 MICALL2Q8IY33 904 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 WDTC1Q8N5D0 677 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 EIF1ADQ8N9N8 165 aaKnown RBP6.46□□□□□ -1.37
CLCN3-201ENST00000347613 ANKLE1Q8NAG6 615 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 FBXL13Q8NEE6 735 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 CCDC26Q8TAB7 109 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 TRPM4Q8TD43 1214 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 CXCL16Q9H2A7 254 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 CDC42EP4Q9H3Q1 356 aaKnown RBP6.46□□□□□ -1.37
CLCN3-201ENST00000347613 TMEM8AQ9HCN3 771 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 CD248Q9HCU0 757 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 CYP39A1Q9NYL5 469 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 ANAPC7Q9UJX3 599 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 SH3BP1Q9Y3L3 701 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 STK24Q9Y6E0 443 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 MCM3APO60318 1980 aa6.46□□□□□ -1.37
CLCN3-201ENST00000347613 FAM189A1O60320 539 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 ERLIN2O94905 339 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 CD58P19256 250 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 GLRA2P23416 452 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 GCAP28676 217 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 MMP13P45452 471 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 IFNAR2P48551 515 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 GMPSP49915 693 aaPredicted RBP6.46□□□□□ -1.38
CLCN3-201ENST00000347613 KLF1Q13351 362 aaPredicted RBP6.46□□□□□ -1.38
CLCN3-201ENST00000347613 ORC1Q13415 861 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 SF3B2Q13435 895 aaKnown RBP6.46□□□□□ -1.38
CLCN3-201ENST00000347613 KYNUQ16719 465 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 TREML2Q5T2D2 321 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 VSTM1Q6UX27 236 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 NIPA1Q7RTP0 329 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 EFCAB13Q8IY85 973 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 TMEM192Q8IY95 271 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 LRRC34Q8IZ02 419 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 KIAA0319LQ8IZA0 1049 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 GPATCH11Q8N954 259 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 TARS2Q9BW92 718 aaKnown RBP6.46□□□□□ -1.38
CLCN3-201ENST00000347613 FHDC1Q9C0D6 1143 aaPredicted RBP6.46□□□□□ -1.38
CLCN3-201ENST00000347613 CYP26B1Q9NR63 512 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 ARHGAP28Q9P2N2 729 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 SEPT9Q9UHD8 586 aaPredicted RBP6.46□□□□□ -1.38
CLCN3-201ENST00000347613 AGAP1Q9UPQ3 857 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 PCDHA10Q9Y5I2 948 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 CNTNAP2Q9UHC6 1331 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 UNCXA6NJT0 531 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 WDR64B1ANS9 1081 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 HNRNPDLO14979 420 aaKnown RBP6.46□□□□□ -1.38
CLCN3-201ENST00000347613 CSDE1O75534 798 aaKnown RBP6.46□□□□□ -1.38
CLCN3-201ENST00000347613 NUDT17P0C025 328 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 RALAP11233 206 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 GZMAP12544 262 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 KRT17Q04695 432 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 MYBPC2Q14324 1141 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 ZNF394Q53GI3 561 aa6.46□□□□□ -1.38
CLCN3-201ENST00000347613 ODF2Q5BJF6 829 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms