RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 GLE1Q53GS7 698 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP1-202ENST00000346416 ZNF484Q5JVG2 852 aa15.16■□□□□ 0.02
CDK5RAP1-202ENST00000346416 TSHZ1Q6ZSZ6 1077 aa15.16■□□□□ 0.02
CDK5RAP1-202ENST00000346416 RUBCNQ92622 972 aa15.16■□□□□ 0.02
CDK5RAP1-202ENST00000346416 EMID1Q96A84 441 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP1-202ENST00000346416 FZD8Q9H461 694 aa15.16■□□□□ 0.02
CDK5RAP1-202ENST00000346416 CHORDC1Q9UHD1 332 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP1-202ENST00000346416 TMEM59LQ9UK28 342 aa15.16■□□□□ 0.02
CDK5RAP1-202ENST00000346416 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP1-202ENST00000346416 ASAP2O43150 1006 aa15.15■□□□□ 0.02
CDK5RAP1-202ENST00000346416 B4GALT5O43286 388 aa15.15■□□□□ 0.02
CDK5RAP1-202ENST00000346416 ATMINO43313 823 aaPredicted RBP15.15■□□□□ 0.02
CDK5RAP1-202ENST00000346416 ZNF286BP0CG31 522 aa15.15■□□□□ 0.02
CDK5RAP1-202ENST00000346416 PTENP60484 403 aa15.15■□□□□ 0.02
CDK5RAP1-202ENST00000346416 CUL2Q13617 745 aa15.15■□□□□ 0.02
CDK5RAP1-202ENST00000346416 NCOA4Q13772 614 aa15.15■□□□□ 0.02
CDK5RAP1-202ENST00000346416 FAM110CQ1W6H9 321 aa15.15■□□□□ 0.02
CDK5RAP1-202ENST00000346416 GSPT2Q8IYD1 628 aaKnown RBP15.15■□□□□ 0.02
CDK5RAP1-202ENST00000346416 MAML3Q96JK9 1138 aa15.15■□□□□ 0.02
CDK5RAP1-202ENST00000346416 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.15■□□□□ 0.027e-7■■■□□ 16
CDK5RAP1-202ENST00000346416 UBXN6Q9BZV1 441 aa15.15■□□□□ 0.02
CDK5RAP1-202ENST00000346416 MINDY3Q9H8M7 445 aa15.15■□□□□ 0.02
CDK5RAP1-202ENST00000346416 PCDHB2Q9Y5E7 798 aa15.15■□□□□ 0.02
CDK5RAP1-202ENST00000346416 PGRMC1O00264 195 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 ACO1P21399 889 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 PROZP22891 400 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 NOP14P78316 857 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 GRM1Q13255 1194 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 SMC1AQ14683 1233 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 ATF7IP2Q5U623 682 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 SCARA3Q6AZY7 606 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 MPZL3Q6UWV2 235 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 WDR49Q8IV35 697 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 FAM212AQ96EL1 285 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CALR3Q96L12 384 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 KRT12Q99456 494 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 PTPRHQ9HD43 1115 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CPSF3Q9UKF6 684 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 NOC2LQ9Y3T9 749 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 ALG6Q9Y672 507 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 DDX3YO15523 660 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 PPFIA4O75335 1185 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CLSTN1O94985 981 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CLTAP09496 248 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 AP3M2P53677 418 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 MBTD1Q05BQ5 628 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 TMEM132AQ24JP5 1023 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CLEC16AQ2KHT3 1053 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 ACAD10Q6JQN1 1059 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 C11orf63Q6NUN7 778 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 PLEKHH3Q7Z736 793 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CDR2LQ86X02 465 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 RASGEF1CQ8N431 466 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 C16orf70Q9BSU1 422 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 MTMR12Q9C0I1 747 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 NUB1Q9Y5A7 615 aa15.14■□□□□ 0.01
CDK5RAP1-202ENST00000346416 UMODL1Q5DID0 1318 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 MTA2O94776 668 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CST3P01034 146 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CYP1A2P05177 515 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 IQCF3P0C7M6 154 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 BPIFB4P59827 614 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 TNNC1P63316 161 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 ZNF568Q3ZCX4 644 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 THNSL1Q8IYQ7 743 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 ZNF653Q96CK0 615 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 GDAP1L1Q96MZ0 367 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 TINF2Q9BSI4 451 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 IFT122Q9HBG6 1241 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 GTF3C4Q9UKN8 822 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 H3BRB1 525 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 MAGEB2O15479 319 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 GLI1P08151 1106 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 SMPD1P17405 629 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 TBXAS1P24557 533 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 MAPK4P31152 587 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 TNNT3P45378 269 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 GABPB1Q06547 395 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 DCAF12L1Q5VU92 463 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 EEF1DP3Q658K8 133 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 TMEM270Q6UE05 265 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 ZNF677Q86XU0 584 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 KLHL7Q8IXQ5 586 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 MSL3Q8N5Y2 521 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 NUP85Q9BW27 656 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 AP1M1Q9BXS5 423 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 NFKBIZQ9BYH8 718 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 IMPG2Q9BZV3 1241 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 TUT1Q9H6E5 874 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 PCDHB4Q9Y5E5 795 aa15.13■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CSDE1O75534 798 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP1-202ENST00000346416 UNGP13051 313 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP1-202ENST00000346416 OSTNP61366 133 aa15.12■□□□□ 0.01
CDK5RAP1-202ENST00000346416 ACVR2BQ13705 512 aa15.12■□□□□ 0.01
CDK5RAP1-202ENST00000346416 MESDQ14696 234 aa15.12■□□□□ 0.01
CDK5RAP1-202ENST00000346416 DUOXA2Q1HG44 320 aa15.12■□□□□ 0.01
CDK5RAP1-202ENST00000346416 DUSP28Q4G0W2 176 aa15.12■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CST9Q5W186 159 aa15.12■□□□□ 0.01
CDK5RAP1-202ENST00000346416 LINC01465Q8N7H1 131 aa15.12■□□□□ 0.01
CDK5RAP1-202ENST00000346416 CEP120Q8N960 986 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms