RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 ACTRT1Q8TDG2 376 aa18.4■□□□□ 0.54
SPAST-202ENST00000345662 KLF6Q99612 283 aaPredicted RBP18.4■□□□□ 0.54
SPAST-202ENST00000345662 RXFP1Q9HBX9 757 aa18.4■□□□□ 0.54
SPAST-202ENST00000345662 CHMP2BQ9UQN3 213 aa18.4■□□□□ 0.54
SPAST-202ENST00000345662 TET3O43151 1660 aa18.4■□□□□ 0.54
SPAST-202ENST00000345662 WDR17Q8IZU2 1322 aa18.39■□□□□ 0.54
SPAST-202ENST00000345662 SLC4A1P02730 911 aa18.39■□□□□ 0.54
SPAST-202ENST00000345662 RARGP13631 454 aa18.39■□□□□ 0.54
SPAST-202ENST00000345662 COPB2P35606 906 aa18.39■□□□□ 0.54
SPAST-202ENST00000345662 CDH6P55285 790 aa18.39■□□□□ 0.54
SPAST-202ENST00000345662 SKOR1P84550 965 aa18.39■□□□□ 0.54
SPAST-202ENST00000345662 C3orf62Q6ZUJ4 267 aa18.39■□□□□ 0.54
SPAST-202ENST00000345662 TMEM179Q6ZVK1 233 aa18.39■□□□□ 0.54
SPAST-202ENST00000345662 TMA16Q96EY4 203 aaKnown RBP18.39■□□□□ 0.54
SPAST-202ENST00000345662 MAP3K14Q99558 947 aa18.39■□□□□ 0.54
SPAST-202ENST00000345662 MRPL1Q9BYD6 325 aaKnown RBP18.39■□□□□ 0.54
SPAST-202ENST00000345662 ZC3H7BQ9UGR2 993 aaKnown RBP18.39■□□□□ 0.54
SPAST-202ENST00000345662 UTYO14607 1347 aa18.39■□□□□ 0.53
SPAST-202ENST00000345662 A0A087X0T9 212 aa18.39■□□□□ 0.53
SPAST-202ENST00000345662 FAM228BP0C875 321 aa18.39■□□□□ 0.53
SPAST-202ENST00000345662 GID8Q9NWU2 228 aa18.39■□□□□ 0.53
SPAST-202ENST00000345662 HEY2Q9UBP5 337 aa18.39■□□□□ 0.53
SPAST-202ENST00000345662 NLRP1Q9C000 1473 aa18.39■□□□□ 0.53
SPAST-202ENST00000345662 KRT75O95678 551 aa18.39■□□□□ 0.53
SPAST-202ENST00000345662 P4HBP07237 508 aaKnown RBP18.39■□□□□ 0.53
SPAST-202ENST00000345662 CC2D2BQ6DHV5 1058 aa18.39■□□□□ 0.53
SPAST-202ENST00000345662 E2F7Q96AV8 911 aa18.39■□□□□ 0.53
SPAST-202ENST00000345662 OLFML3Q9NRN5 406 aa18.39■□□□□ 0.53
SPAST-202ENST00000345662 KLHL11Q9NVR0 708 aa18.39■□□□□ 0.53
SPAST-202ENST00000345662 DTNAQ9Y4J8 743 aa18.39■□□□□ 0.53
SPAST-202ENST00000345662 AIM2O14862 343 aa18.39■□□□□ 0.53
SPAST-202ENST00000345662 MKRN4PQ13434 485 aaPredicted RBP18.39■□□□□ 0.53
SPAST-202ENST00000345662 ADCK1Q86TW2 530 aa18.39■□□□□ 0.53
SPAST-202ENST00000345662 THNSL1Q8IYQ7 743 aa18.39■□□□□ 0.53
SPAST-202ENST00000345662 NAGPAQ9UK23 515 aa18.39■□□□□ 0.53
SPAST-202ENST00000345662 FASTKD1Q53R41 847 aaKnown RBP18.38■□□□□ 0.53
SPAST-202ENST00000345662 FOXP4Q8IVH2 680 aaPredicted RBP18.38■□□□□ 0.53
SPAST-202ENST00000345662 ZKSCAN4Q969J2 545 aaPredicted RBP18.38■□□□□ 0.53
SPAST-202ENST00000345662 TMEM117Q9H0C3 514 aa18.38■□□□□ 0.53
SPAST-202ENST00000345662 SEPT3Q9UH03 358 aa18.38■□□□□ 0.53
SPAST-202ENST00000345662 XPO7Q9UIA9 1087 aaKnown RBP18.38■□□□□ 0.53
SPAST-202ENST00000345662 CLEC11AQ9Y240 323 aa18.38■□□□□ 0.53
SPAST-202ENST00000345662 SNRPAP09012 282 aaKnown RBP18.38■□□□□ 0.53
SPAST-202ENST00000345662 C1orf228Q6PIY5 440 aa18.38■□□□□ 0.53
SPAST-202ENST00000345662 FUKQ8N0W3 1084 aa18.38■□□□□ 0.53
SPAST-202ENST00000345662 TBC1D22BQ9NU19 505 aa18.38■□□□□ 0.53
SPAST-202ENST00000345662 ABCB11O95342 1321 aa18.38■□□□□ 0.53
SPAST-202ENST00000345662 RSPH10B2B2RC85 870 aa18.38■□□□□ 0.53
SPAST-202ENST00000345662 SMAPO00193 183 aa18.38■□□□□ 0.53
SPAST-202ENST00000345662 RSPH10BP0C881 870 aa18.38■□□□□ 0.53
SPAST-202ENST00000345662 SRGAP2CP0DJJ0 459 aa18.38■□□□□ 0.53
SPAST-202ENST00000345662 MTHFD1LQ6UB35 978 aa18.38■□□□□ 0.53
SPAST-202ENST00000345662 NCAPG2Q86XI2 1143 aa18.38■□□□□ 0.53
SPAST-202ENST00000345662 SLC13A5Q86YT5 568 aaPredicted RBP18.38■□□□□ 0.53
SPAST-202ENST00000345662 AENQ8WTP8 325 aaKnown RBP18.38■□□□□ 0.53
SPAST-202ENST00000345662 C10orf88Q9H8K7 445 aa18.38■□□□□ 0.53
SPAST-202ENST00000345662 SENP2Q9HC62 589 aa18.38■□□□□ 0.53
SPAST-202ENST00000345662 PCMTD2Q9NV79 361 aa18.38■□□□□ 0.53
SPAST-202ENST00000345662 ZFYVE16Q7Z3T8 1539 aa18.38■□□□□ 0.53
SPAST-202ENST00000345662 ADRM1Q16186 407 aa18.38■□□□□ 0.53
SPAST-202ENST00000345662 ADGRF4Q8IZF3 695 aa18.38■□□□□ 0.53
SPAST-202ENST00000345662 BLOC1S6Q9UL45 172 aa18.38■□□□□ 0.53
SPAST-202ENST00000345662 NEMP1O14524 444 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 WEE2P0C1S8 567 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 GEMIN4P57678 1058 aaKnown RBP18.37■□□□□ 0.53
SPAST-202ENST00000345662 MTMR1Q13613 665 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 TSTA3Q13630 321 aaPredicted RBP18.37■□□□□ 0.53
SPAST-202ENST00000345662 FAM98CQ17RN3 349 aaKnown RBP18.37■□□□□ 0.53
SPAST-202ENST00000345662 DDHD1Q8NEL9 900 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 RPS6KC1Q96S38 1066 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 SENP7Q9BQF6 1050 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 LXNQ9BS40 222 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 BBOX1O75936 387 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 QARSP47897 775 aaKnown RBP18.37■□□□□ 0.53
SPAST-202ENST00000345662 HAUS6Q7Z4H7 955 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 ISCA1Q9BUE6 129 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 SPDYE2BA6NHP3 402 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 RPS6KA5O75582 802 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 SPDYE6P0CI01 402 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 COPAP53621 1224 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 LRRC8BQ6P9F7 803 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 GPD1LQ8N335 351 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 SLC12A6Q9UHW9 1150 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 FNDC3AQ9Y2H6 1198 aaKnown RBP18.37■□□□□ 0.53
SPAST-202ENST00000345662 CLTCL1P53675 1640 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 STRNO43815 780 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 ACTR2P61160 394 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 OVGP1Q12889 678 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 CAPRIN1Q14444 709 aaKnown RBP18.37■□□□□ 0.53
SPAST-202ENST00000345662 QRICH1Q2TAL8 776 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 ARID3BQ8IVW6 561 aaPredicted RBP18.37■□□□□ 0.53
SPAST-202ENST00000345662 PRPF38AQ8NAV1 312 aaKnown RBP18.37■□□□□ 0.53
SPAST-202ENST00000345662 OR9Q1Q8NGQ5 310 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 EML4Q9HC35 981 aaKnown RBP18.37■□□□□ 0.53
SPAST-202ENST00000345662 A2ML1A8K2U0 1454 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 PTPN4P29074 926 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 CACNA2D1P54289 1103 aa18.37■□□□□ 0.53
SPAST-202ENST00000345662 SETD3Q86TU7 594 aaPredicted RBP18.37■□□□□ 0.53
SPAST-202ENST00000345662 CDR2LQ86X02 465 aaPredicted RBP18.37■□□□□ 0.53
SPAST-202ENST00000345662 ARHGEF26Q96DR7 871 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms