RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 EIF3EP60228 445 aaKnown RBP19.04■□□□□ 0.64
SMC4-201ENST00000344722 ZNF667Q5HYK9 610 aa19.04■□□□□ 0.64
SMC4-201ENST00000344722 MRPL1Q9BYD6 325 aaKnown RBP19.04■□□□□ 0.64
SMC4-201ENST00000344722 INO80BQ9C086 356 aaPredicted RBP19.04■□□□□ 0.64
SMC4-201ENST00000344722 CPA2P48052 419 aa19.04■□□□□ 0.64
SMC4-201ENST00000344722 FLOT2Q14254 428 aa19.04■□□□□ 0.64
SMC4-201ENST00000344722 MTERF2Q49AM1 385 aa19.04■□□□□ 0.64
SMC4-201ENST00000344722 IRGCQ6NXR0 463 aa19.04■□□□□ 0.64
SMC4-201ENST00000344722 SLC13A5Q86YT5 568 aaPredicted RBP19.04■□□□□ 0.64
SMC4-201ENST00000344722 SCUBE1Q8IWY4 988 aa19.04■□□□□ 0.64
SMC4-201ENST00000344722 FAM192AQ9GZU8 254 aa19.04■□□□□ 0.64
SMC4-201ENST00000344722 RGL1Q9NZL6 768 aa19.04■□□□□ 0.64
SMC4-201ENST00000344722 WHRNQ9P202 907 aa19.04■□□□□ 0.64
SMC4-201ENST00000344722 XPO1O14980 1071 aaKnown RBP19.04■□□□□ 0.64
SMC4-201ENST00000344722 COPAP53621 1224 aa19.04■□□□□ 0.64
SMC4-201ENST00000344722 TTC39BQ5VTQ0 682 aaPredicted RBP19.04■□□□□ 0.64
SMC4-201ENST00000344722 PCSK1NQ9UHG2 260 aa19.04■□□□□ 0.64
SMC4-201ENST00000344722 NAGPAQ9UK23 515 aa19.04■□□□□ 0.64
SMC4-201ENST00000344722 ZFYVE16Q7Z3T8 1539 aa19.04■□□□□ 0.64
SMC4-201ENST00000344722 SLC16A4O15374 487 aa19.03■□□□□ 0.64
SMC4-201ENST00000344722 CA8P35219 290 aa19.03■□□□□ 0.64
SMC4-201ENST00000344722 SNRPAP09012 282 aaKnown RBP19.03■□□□□ 0.64
SMC4-201ENST00000344722 AK9Q5TCS8 1911 aa19.03■□□□□ 0.64
SMC4-201ENST00000344722 A0A087X0T9 212 aa19.03■□□□□ 0.64
SMC4-201ENST00000344722 NPHP3-ACAD11A0A0J9YXS1 232 aa19.03■□□□□ 0.64
SMC4-201ENST00000344722 CES2O00748 559 aa19.03■□□□□ 0.64
SMC4-201ENST00000344722 AKAP10O43572 662 aa19.03■□□□□ 0.64
SMC4-201ENST00000344722 FAM228BP0C875 321 aa19.03■□□□□ 0.64
SMC4-201ENST00000344722 KCNJ1P48048 391 aa19.03■□□□□ 0.64
SMC4-201ENST00000344722 MCPH1Q8NEM0 835 aa19.03■□□□□ 0.64
SMC4-201ENST00000344722 ZSWIM1Q9BR11 485 aa19.03■□□□□ 0.64
SMC4-201ENST00000344722 FAM213AQ9BRX8 229 aa19.03■□□□□ 0.64
SMC4-201ENST00000344722 EML4Q9HC35 981 aaKnown RBP19.03■□□□□ 0.64
SMC4-201ENST00000344722 BLOC1S6Q9UL45 172 aa19.03■□□□□ 0.64
SMC4-201ENST00000344722 FKBP6O75344 327 aa19.03■□□□□ 0.64
SMC4-201ENST00000344722 ENO3P13929 434 aaPredicted RBP19.03■□□□□ 0.64
SMC4-201ENST00000344722 ARL13BQ3SXY8 428 aa19.03■□□□□ 0.64
SMC4-201ENST00000344722 ZNF394Q53GI3 561 aa19.03■□□□□ 0.64
SMC4-201ENST00000344722 TTC8Q8TAM2 541 aa19.03■□□□□ 0.64
SMC4-201ENST00000344722 ZNF512BQ96KM6 892 aaPredicted RBP19.03■□□□□ 0.64
SMC4-201ENST00000344722 XPO7Q9UIA9 1087 aaKnown RBP19.03■□□□□ 0.64
SMC4-201ENST00000344722 CDC42BPAQ5VT25 1732 aa19.02■□□□□ 0.64
SMC4-201ENST00000344722 TNFRSF8P28908 595 aa19.02■□□□□ 0.64
SMC4-201ENST00000344722 ZNF844Q08AG5 666 aa19.02■□□□□ 0.64
SMC4-201ENST00000344722 ZBTB41Q5SVQ8 909 aa19.02■□□□□ 0.64
SMC4-201ENST00000344722 MTHFD1LQ6UB35 978 aa19.02■□□□□ 0.64
SMC4-201ENST00000344722 C3orf62Q6ZUJ4 267 aa19.02■□□□□ 0.64
SMC4-201ENST00000344722 EIF2AK1Q9BQI3 630 aaKnown RBP19.02■□□□□ 0.64
SMC4-201ENST00000344722 ADNPQ9H2P0 1102 aa19.02■□□□□ 0.64
SMC4-201ENST00000344722 KRT16P08779 473 aa19.02■□□□□ 0.64
SMC4-201ENST00000344722 NT5DC1Q5TFE4 455 aa19.02■□□□□ 0.64
SMC4-201ENST00000344722 FAM160B2Q86V87 743 aa19.02■□□□□ 0.64
SMC4-201ENST00000344722 EXT2Q93063 718 aa19.02■□□□□ 0.64
SMC4-201ENST00000344722 CNBD2Q96M20 576 aa19.02■□□□□ 0.64
SMC4-201ENST00000344722 M0QZ92 97 aa19.02■□□□□ 0.64
SMC4-201ENST00000344722 DDR1Q08345 913 aa19.02■□□□□ 0.64
SMC4-201ENST00000344722 TMTC4Q5T4D3 741 aa19.02■□□□□ 0.64
SMC4-201ENST00000344722 IZUMO2Q6UXV1 221 aa19.02■□□□□ 0.64
SMC4-201ENST00000344722 C7orf31Q8N865 590 aa19.02■□□□□ 0.64
SMC4-201ENST00000344722 MARCH10Q8NA82 808 aaPredicted RBP19.02■□□□□ 0.64
SMC4-201ENST00000344722 CATSPER2Q96P56 530 aa19.02■□□□□ 0.64
SMC4-201ENST00000344722 SENP7Q9BQF6 1050 aa19.02■□□□□ 0.64
SMC4-201ENST00000344722 RPF1Q9H9Y2 349 aaKnown RBP19.02■□□□□ 0.64
SMC4-201ENST00000344722 LRRC4Q9HBW1 653 aa19.02■□□□□ 0.64
SMC4-201ENST00000344722 ATP11BQ9Y2G3 1177 aa19.02■□□□□ 0.64
SMC4-201ENST00000344722 AP4S1Q9Y587 144 aa19.02■□□□□ 0.64
SMC4-201ENST00000344722 UTYO14607 1347 aa19.02■□□□□ 0.64
SMC4-201ENST00000344722 TCP10L2B9ZVM9 353 aa19.02■□□□□ 0.63
SMC4-201ENST00000344722 R3HDM1Q15032 1099 aaKnown RBP19.02■□□□□ 0.63
SMC4-201ENST00000344722 CD302Q8IX05 232 aa19.02■□□□□ 0.63
SMC4-201ENST00000344722 KLHL4Q9C0H6 718 aa19.02■□□□□ 0.63
SMC4-201ENST00000344722 BFARQ9NZS9 450 aa19.02■□□□□ 0.63
SMC4-201ENST00000344722 ZC3H7BQ9UGR2 993 aaKnown RBP19.02■□□□□ 0.63
SMC4-201ENST00000344722 AHCYL1O43865 530 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 GDF11O95390 407 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 COPB2P35606 906 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 TTMPQ5BVD1 217 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 SUSD4Q5VX71 490 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 PI4KBQ9UBF8 816 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 ATXN2Q99700 1313 aaKnown RBP19.01■□□□□ 0.63
SMC4-201ENST00000344722 WEE2P0C1S8 567 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 HSPA1AP0DMV8 641 aaKnown RBP19.01■□□□□ 0.63
SMC4-201ENST00000344722 HSPA1BP0DMV9 641 aaKnown RBP19.01■□□□□ 0.63
SMC4-201ENST00000344722 SLC34A1Q06495 639 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 TRADDQ15628 312 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 SPDYCQ5MJ68 293 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 LRRC8BQ6P9F7 803 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 TMA16Q96EY4 203 aaKnown RBP19.01■□□□□ 0.63
SMC4-201ENST00000344722 CEP95Q96GE4 821 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 CDC42BPGQ6DT37 1551 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 A0A0A6YYK5 440 aaPredicted RBP19.01■□□□□ 0.63
SMC4-201ENST00000344722 TRIM16LQ309B1 348 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 TTI2Q6NXR4 508 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 ARHGEF26Q96DR7 871 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 ISCA1Q9BUE6 129 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 TUFT1Q9NNX1 390 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 LOC102724428A0A0B4J2F2 783 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 SPDYE16A6NNV3 312 aaPredicted RBP19.01■□□□□ 0.63
SMC4-201ENST00000344722 SIK1P57059 783 aa19.01■□□□□ 0.63
SMC4-201ENST00000344722 SPDYE2Q495Y8 402 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms