RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 TTC26A0AVF1 554 aa15.83■□□□□ 0.12
UBE3B-202ENST00000342494 NCK2O43639 380 aa15.83■□□□□ 0.12
UBE3B-202ENST00000342494 RTN2O75298 545 aa15.83■□□□□ 0.12
UBE3B-202ENST00000342494 SERPIND1P05546 499 aa15.83■□□□□ 0.12
UBE3B-202ENST00000342494 RGS2P41220 211 aa15.83■□□□□ 0.12
UBE3B-202ENST00000342494 KCNB1Q14721 858 aa15.83■□□□□ 0.12
UBE3B-202ENST00000342494 CCDC137Q6PK04 289 aaKnown RBP15.83■□□□□ 0.12
UBE3B-202ENST00000342494 NR1H4Q96RI1 486 aaPredicted RBP15.83■□□□□ 0.12
UBE3B-202ENST00000342494 REEP2Q9BRK0 252 aa15.83■□□□□ 0.12
UBE3B-202ENST00000342494 SLC13A1Q9BZW2 595 aa15.83■□□□□ 0.12
UBE3B-202ENST00000342494 DDX47Q9H0S4 455 aaKnown RBP15.83■□□□□ 0.12
UBE3B-202ENST00000342494 ALKQ9UM73 1620 aa15.83■□□□□ 0.12
UBE3B-202ENST00000342494 SNRNP35Q16560 246 aaKnown RBP15.83■□□□□ 0.12
UBE3B-202ENST00000342494 BPIFA3Q9BQP9 254 aa15.83■□□□□ 0.12
UBE3B-202ENST00000342494 NEUROG2Q9H2A3 272 aa15.83■□□□□ 0.12
UBE3B-202ENST00000342494 KCND2Q9NZV8 630 aa15.83■□□□□ 0.12
UBE3B-202ENST00000342494 ADCY10Q96PN6 1610 aa15.83■□□□□ 0.12
UBE3B-202ENST00000342494 UBE2Q2LH0YL09 131 aa15.83■□□□□ 0.12
UBE3B-202ENST00000342494 DIAPH2O60879 1101 aa15.83■□□□□ 0.12
UBE3B-202ENST00000342494 NTSR2O95665 410 aa15.83■□□□□ 0.12
UBE3B-202ENST00000342494 OCM2P0CE71 109 aa15.83■□□□□ 0.12
UBE3B-202ENST00000342494 OCMP0CE72 109 aaPredicted RBP15.83■□□□□ 0.12
UBE3B-202ENST00000342494 ZFATQ9P243 1243 aa15.83■□□□□ 0.12
UBE3B-202ENST00000342494 SETD1BQ9UPS6 1966 aaKnown RBP15.83■□□□□ 0.12
UBE3B-202ENST00000342494 PDHBP11177 359 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 SLC1A1P43005 524 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 IZUMO3Q5VZ72 239 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 NFRKBQ6P4R8 1299 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 ATXN7L3BQ96GX2 97 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 MXRA8Q9BRK3 442 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 KDM4CQ9H3R0 1056 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.82■□□□□ 0.12
UBE3B-202ENST00000342494 SESN2P58004 480 aaPredicted RBP15.82■□□□□ 0.12
UBE3B-202ENST00000342494 PDXDC1Q6P996 788 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 RRM2BQ7LG56 351 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 AGAP3Q96P47 875 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 SRPK1Q96SB4 655 aaKnown RBP15.82■□□□□ 0.12
UBE3B-202ENST00000342494 TRIM9Q9C026 710 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 KCNN4O15554 427 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 ALDH7A1P49419 539 aaKnown RBP15.82■□□□□ 0.12
UBE3B-202ENST00000342494 ARSEP51690 589 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 EFTUD2Q15029 972 aaKnown RBP eCLIP15.82■□□□□ 0.122e-6■■■□□ 17.4
UBE3B-202ENST00000342494 ARHGAP15Q53QZ3 475 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 NOTUMQ6P988 496 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 SHC4Q6S5L8 630 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 AGBL1Q96MI9 1066 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 OSBPL9Q96SU4 736 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 CCSER1Q9C0I3 900 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 AP3B1O00203 1094 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 RASA1P20936 1047 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 GCKP35557 465 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 USP33Q8TEY7 942 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 CEP19Q96LK0 163 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 CYTH2Q99418 400 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 PRG3Q9Y2Y8 225 aaPredicted RBP15.82■□□□□ 0.12
UBE3B-202ENST00000342494 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.82■□□□□ 0.12
UBE3B-202ENST00000342494 SLC30A1Q9Y6M5 507 aa15.82■□□□□ 0.12
UBE3B-202ENST00000342494 C17orf102A2RUQ5 167 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 STAG3L1P0CL83 205 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 GFAPP14136 432 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 ITPK1Q13572 414 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 ARID5BQ14865 1188 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 NT5C1AQ9BXI3 368 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 LRG1P02750 347 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 NUDCD3Q8IVD9 361 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 RBBP8NLQ8NC74 664 aaPredicted RBP15.81■□□□□ 0.12
UBE3B-202ENST00000342494 SLITRK1Q96PX8 696 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 FAM49BQ9NUQ9 324 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 XRRA1Q6P2D8 792 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 MTBPQ96DY7 904 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 MRPL40Q9NQ50 206 aaKnown RBP15.81■□□□□ 0.12
UBE3B-202ENST00000342494 APEX2Q9UBZ4 518 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 GRID2IPA4D2P6 1211 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 DEUP1Q05D60 604 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 SCFD1Q8WVM8 642 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 TMEM169Q96HH4 297 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 TMEM60Q9H2L4 133 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 SPATA31A5Q5VU36 1347 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 SPATA31A7Q8IWB4 1347 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 ARHGAP10A1A4S6 786 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 FAM187AA6NFU0 413 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 GYG2O15488 501 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 AARSP49588 968 aaKnown RBP eCLIP15.81■□□□□ 0.12
UBE3B-202ENST00000342494 HPS3Q969F9 1004 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 RIT2Q99578 217 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 PHF20Q9BVI0 1012 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 KLHL11Q9NVR0 708 aa15.81■□□□□ 0.12
UBE3B-202ENST00000342494 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.81■□□□□ 0.12
UBE3B-202ENST00000342494 CNTNAP4Q9C0A0 1308 aa15.8■□□□□ 0.12
UBE3B-202ENST00000342494 PSMD3O43242 534 aa15.8■□□□□ 0.12
UBE3B-202ENST00000342494 TEX33O43247 280 aa15.8■□□□□ 0.12
UBE3B-202ENST00000342494 THPOP40225 353 aa15.8■□□□□ 0.12
UBE3B-202ENST00000342494 CPA5Q8WXQ8 436 aa15.8■□□□□ 0.12
UBE3B-202ENST00000342494 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.8■□□□□ 0.12
UBE3B-202ENST00000342494 A0A1W2PQC6 194 aa15.8■□□□□ 0.12
UBE3B-202ENST00000342494 DCDC2CA8MYV0 355 aa15.8■□□□□ 0.12
UBE3B-202ENST00000342494 EEF2KO00418 725 aaKnown RBP15.8■□□□□ 0.12
UBE3B-202ENST00000342494 C2CD2LO14523 706 aa15.8■□□□□ 0.12
UBE3B-202ENST00000342494 FOXN1O15353 648 aa15.8■□□□□ 0.12
UBE3B-202ENST00000342494 TLR2O60603 784 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms