RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 E9PBE3 544 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 PABPC1P11940 636 aaKnown RBP17.98■□□□□ 0.47
CDK11B-201ENST00000340677 HSP90AA5PQ58FG0 334 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 C12orf60Q5U649 245 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 CPLX4Q7Z7G2 160 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 BBS5Q8N3I7 341 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 TTC1Q99614 292 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 NUF2Q9BZD4 464 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 CYLDQ9NQC7 956 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 C8orf4Q9NR00 106 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 FANCLQ9NW38 375 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 DOLKQ9UPQ8 538 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 HPS5Q9UPZ3 1129 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 PCDHGA3Q9Y5H0 932 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 SNPHO15079 494 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 ADCY3O60266 1144 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 MAP3K6O95382 1288 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 TFPTP0C1Z6 253 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 HSD17B2P37059 387 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 NAA20P61599 178 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 MRPS25P82663 173 aaKnown RBP17.98■□□□□ 0.47
CDK11B-201ENST00000340677 TMEM67Q5HYA8 995 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 PPP4R4Q6NUP7 873 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 FMR1NBQ8N0W7 255 aaPredicted RBP17.98■□□□□ 0.47
CDK11B-201ENST00000340677 SLC7A3Q8WY07 619 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 ZIM3Q96PE6 472 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 STK33Q9BYT3 514 aa17.98■□□□□ 0.47
CDK11B-201ENST00000340677 FARP2O94887 1054 aaPredicted RBP17.97■□□□□ 0.47
CDK11B-201ENST00000340677 DPEP1P16444 411 aa17.97■□□□□ 0.47
CDK11B-201ENST00000340677 TAF1CQ15572 869 aaPredicted RBP17.97■□□□□ 0.47
CDK11B-201ENST00000340677 DOK7Q18PE1 504 aa17.97■□□□□ 0.47
CDK11B-201ENST00000340677 APOA5Q6Q788 366 aa17.97■□□□□ 0.47
CDK11B-201ENST00000340677 CERS5Q8N5B7 392 aa17.97■□□□□ 0.47
CDK11B-201ENST00000340677 CDKL2Q92772 493 aa17.97■□□□□ 0.47
CDK11B-201ENST00000340677 ZNF333Q96JL9 665 aa17.97■□□□□ 0.47
CDK11B-201ENST00000340677 ALPK1Q96QP1 1244 aa17.97■□□□□ 0.47
CDK11B-201ENST00000340677 CCDC28BQ9BUN5 200 aa17.97■□□□□ 0.47
CDK11B-201ENST00000340677 GMIPQ9P107 970 aa17.97■□□□□ 0.47
CDK11B-201ENST00000340677 DAGLAQ9Y4D2 1042 aa17.97■□□□□ 0.47
CDK11B-201ENST00000340677 ZSCAN5BA6NJL1 495 aa17.97■□□□□ 0.47
CDK11B-201ENST00000340677 GOLGA8BA8MQT2 603 aa17.97■□□□□ 0.47
CDK11B-201ENST00000340677 IFIT3O14879 490 aaKnown RBP17.97■□□□□ 0.47
CDK11B-201ENST00000340677 ECE2O60344 883 aa17.97■□□□□ 0.47
CDK11B-201ENST00000340677 STX10O60499 249 aa17.97■□□□□ 0.47
CDK11B-201ENST00000340677 TPBGLP0DKB5 382 aa17.97■□□□□ 0.47
CDK11B-201ENST00000340677 EIF2B2P49770 351 aaKnown RBP17.97■□□□□ 0.47
CDK11B-201ENST00000340677 SIM2Q14190 667 aaPredicted RBP17.97■□□□□ 0.47
CDK11B-201ENST00000340677 ANKS4BQ8N8V4 417 aa17.97■□□□□ 0.47
CDK11B-201ENST00000340677 RBBP8NLQ8NC74 664 aaPredicted RBP17.97■□□□□ 0.47
CDK11B-201ENST00000340677 SVIPQ8NHG7 77 aa17.97■□□□□ 0.47
CDK11B-201ENST00000340677 NELFBQ8WX92 580 aa17.97■□□□□ 0.47
CDK11B-201ENST00000340677 NMD3Q96D46 503 aaKnown RBP17.97■□□□□ 0.47
CDK11B-201ENST00000340677 PGBD4Q96DM1 585 aa17.97■□□□□ 0.47
CDK11B-201ENST00000340677 NEK6Q9HC98 313 aa17.97■□□□□ 0.47
CDK11B-201ENST00000340677 TBC1D30Q9Y2I9 924 aa17.97■□□□□ 0.47
CDK11B-201ENST00000340677 GUCY1B2O75343 617 aa17.96■□□□□ 0.47
CDK11B-201ENST00000340677 CTDNEP1O95476 244 aa17.96■□□□□ 0.47
CDK11B-201ENST00000340677 PLTPP55058 493 aa17.96■□□□□ 0.47
CDK11B-201ENST00000340677 CD83Q01151 205 aa17.96■□□□□ 0.47
CDK11B-201ENST00000340677 DSTYKQ6XUX3 929 aa17.96■□□□□ 0.47
CDK11B-201ENST00000340677 ZBED8Q8IZ13 594 aa17.96■□□□□ 0.47
CDK11B-201ENST00000340677 SLC35F6Q8N357 371 aa17.96■□□□□ 0.47
CDK11B-201ENST00000340677 NAPGQ99747 312 aaPredicted RBP17.96■□□□□ 0.47
CDK11B-201ENST00000340677 HERC2P3Q9BVR0 1158 aa17.96■□□□□ 0.47
CDK11B-201ENST00000340677 TMEM206Q9H813 350 aa17.96■□□□□ 0.47
CDK11B-201ENST00000340677 NFE2L3Q9Y4A8 694 aa17.96■□□□□ 0.47
CDK11B-201ENST00000340677 ARFGEF1Q9Y6D6 1849 aa17.96■□□□□ 0.47
CDK11B-201ENST00000340677 SNTNA6NMZ2 147 aa17.96■□□□□ 0.47
CDK11B-201ENST00000340677 PRPF3O43395 683 aaKnown RBP17.96■□□□□ 0.47
CDK11B-201ENST00000340677 CBX5P45973 191 aa17.96■□□□□ 0.47
CDK11B-201ENST00000340677 TBX4P57082 545 aa17.96■□□□□ 0.47
CDK11B-201ENST00000340677 MDM2Q00987 491 aaPredicted RBP17.96■□□□□ 0.47
CDK11B-201ENST00000340677 CETN1Q12798 172 aa17.96■□□□□ 0.47
CDK11B-201ENST00000340677 DACT2Q5SW24 774 aa17.96■□□□□ 0.47
CDK11B-201ENST00000340677 CYP4V2Q6ZWL3 525 aaPredicted RBP17.96■□□□□ 0.47
CDK11B-201ENST00000340677 CCDC197Q8NCU1 140 aa17.96■□□□□ 0.47
CDK11B-201ENST00000340677 CDC26Q8NHZ8 85 aa17.96■□□□□ 0.47
CDK11B-201ENST00000340677 PTCD2Q8WV60 388 aaKnown RBP17.96■□□□□ 0.47
CDK11B-201ENST00000340677 MCM9Q9NXL9 1143 aa17.96■□□□□ 0.47
CDK11B-201ENST00000340677 PTTG2Q9NZH5 202 aa17.96■□□□□ 0.47
CDK11B-201ENST00000340677 STIM2Q9P246 746 aa17.96■□□□□ 0.47
CDK11B-201ENST00000340677 MYH8P13535 1937 aa17.95■□□□□ 0.46
CDK11B-201ENST00000340677 TRAV6A0A075B6T7 132 aa17.95■□□□□ 0.46
CDK11B-201ENST00000340677 A0A0U1RQJ8 604 aa17.95■□□□□ 0.46
CDK11B-201ENST00000340677 USP17L3A6NCW0 530 aa17.95■□□□□ 0.46
CDK11B-201ENST00000340677 USP17L4A6NCW7 530 aa17.95■□□□□ 0.46
CDK11B-201ENST00000340677 F8W031 263 aaPredicted RBP17.95■□□□□ 0.46
CDK11B-201ENST00000340677 RARAP10276 462 aa17.95■□□□□ 0.46
CDK11B-201ENST00000340677 SEC23AQ15436 765 aa17.95■□□□□ 0.46
CDK11B-201ENST00000340677 USP43Q70EL4 1123 aa17.95■□□□□ 0.46
CDK11B-201ENST00000340677 USP17L1Q7RTZ2 530 aa17.95■□□□□ 0.46
CDK11B-201ENST00000340677 LARGE2Q8N3Y3 721 aa17.95■□□□□ 0.46
CDK11B-201ENST00000340677 KIF2BQ8N4N8 673 aa17.95■□□□□ 0.46
CDK11B-201ENST00000340677 SLC17A8Q8NDX2 589 aa17.95■□□□□ 0.46
CDK11B-201ENST00000340677 NKX2-3Q8TAU0 364 aa17.95■□□□□ 0.46
CDK11B-201ENST00000340677 NOC3LQ8WTT2 800 aaKnown RBP17.95■□□□□ 0.46
CDK11B-201ENST00000340677 STK32AQ8WU08 396 aa17.95■□□□□ 0.46
CDK11B-201ENST00000340677 OLFM3Q96PB7 478 aa17.95■□□□□ 0.46
CDK11B-201ENST00000340677 PANX2Q96RD6 677 aa17.95■□□□□ 0.46
CDK11B-201ENST00000340677 EHD1Q9H4M9 534 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms