RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 NUB1Q9Y5A7 615 aa10.9□□□□□ -0.66
RBFOX1-202ENST00000340209 ADCY3O60266 1144 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 RNF40O75150 1001 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 STAM2O75886 525 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 ERLIN2O94905 339 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 FMO1Q01740 532 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 WDR72Q3MJ13 1102 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 ATF7IP2Q5U623 682 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 CCNI2Q6ZMN8 369 aaPredicted RBP10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 IFT20Q8IY31 132 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 CCDC105Q8IYK2 499 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 HELQQ8TDG4 1101 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 BRI3BPQ8WY22 251 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 BBXQ8WY36 941 aaPredicted RBP10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 ALG3Q92685 438 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 TLDC2A0PJX2 215 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 TMEM253P0C7T8 217 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 MCM3P25205 808 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 AMHR2Q16671 573 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 ZNF699Q32M78 642 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 NT5DC3Q86UY8 548 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 SH2D3CQ8N5H7 860 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 OR6J1Q8NGC5 347 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 ATP8B4Q8TF62 1192 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 C1orf54Q8WWF1 131 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 SENP7Q9BQF6 1050 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 FAM204AQ9H8W3 233 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 NMRK2Q9NPI5 230 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 SNX24Q9Y343 169 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 GOLGA6L10A0A0M3HER8 536 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 H0YCG3 227 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 HSF2BPO75031 334 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 ATF7P17544 494 aaPredicted RBP10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 FAM47CQ5HY64 1035 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 C10orf76Q5T2E6 689 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 DCUN1D2Q6PH85 259 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 UBL4BQ8N7F7 174 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 CASKIN2Q8WXE0 1202 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 MAGOHBQ96A72 148 aaKnown RBP10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 ZMYND15Q9H091 742 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 CCDC113Q9H0I3 377 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 APOBEC3GQ9HC16 384 aaKnown RBP10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 ADAM22Q9P0K1 906 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 LGALS2P05162 132 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 CHRNB2P17787 502 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 ZNF157P51786 506 aaPredicted RBP10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 BEX3Q00994 111 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 CFAP58Q5T655 872 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 ATG4AQ8WYN0 398 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 SMARCAD1Q9H4L7 1026 aa10.89□□□□□ -0.67
RBFOX1-202ENST00000340209 KRT14P02533 472 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 CAPN2P17655 700 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 GARTP22102 1010 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 GTF2H1P32780 548 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 PLTPP55058 493 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 LACTBP83111 547 aaPredicted RBP10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 PPFIA1Q13136 1202 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 MTM1Q13496 603 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 SLFN12LQ6IEE8 588 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 GPAT2Q6NUI2 795 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 TSEN2Q8NCE0 465 aaKnown RBP10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 RNF169Q8NCN4 708 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 TRIM6Q9C030 488 aaPredicted RBP10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 MYPNQ86TC9 1320 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 RTN2O75298 545 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 TNNC2P02585 160 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 SCP2P22307 547 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 DYNLT1P63172 113 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 C1orf131Q8NDD1 294 aaKnown RBP10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 RNF25Q96BH1 459 aaPredicted RBP10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 FAM167AQ96KS9 214 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 RPF1Q9H9Y2 349 aaKnown RBP10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 C17orf75Q9HAS0 396 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 ERAP1Q9NZ08 941 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 RAB21Q9UL25 225 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 TCRBV7S2A1N4TA0A589 114 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 MYO1FO00160 1098 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 GPC3P51654 580 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 GHRHRQ02643 423 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 DHX9Q08211 1270 aaKnown RBP10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 CUL2Q13617 745 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 KIF22Q14807 665 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 PPP1R7Q15435 360 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 TAF1CQ15572 869 aaPredicted RBP10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 SHC3Q92529 594 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 C18orf8Q96DM3 657 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 ERVK-5Q9HDB9 667 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 KLK14Q9P0G3 267 aa10.88□□□□□ -0.67
RBFOX1-202ENST00000340209 EVPLQ92817 2033 aa10.87□□□□□ -0.67
RBFOX1-202ENST00000340209 PDE4DIPQ5VU43 2346 aa10.87□□□□□ -0.67
RBFOX1-202ENST00000340209 ITGB3P05106 788 aa10.87□□□□□ -0.67
RBFOX1-202ENST00000340209 MYL3P08590 195 aa10.87□□□□□ -0.67
RBFOX1-202ENST00000340209 CETPP11597 493 aa10.87□□□□□ -0.67
RBFOX1-202ENST00000340209 ARL2P36404 184 aa10.87□□□□□ -0.67
RBFOX1-202ENST00000340209 RFC5P40937 340 aa10.87□□□□□ -0.67
RBFOX1-202ENST00000340209 PSMC4P43686 418 aa10.87□□□□□ -0.67
RBFOX1-202ENST00000340209 CDR2Q01850 454 aa10.87□□□□□ -0.67
RBFOX1-202ENST00000340209 PAK2Q13177 524 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms