RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 RBAKQ9NYW8 714 aaPredicted RBP13.66□□□□□ -0.22
PRIM1-201ENST00000338193 CNTN3Q9P232 1028 aa13.66□□□□□ -0.22
PRIM1-201ENST00000338193 TUBGCP4Q9UGJ1 667 aa13.66□□□□□ -0.22
PRIM1-201ENST00000338193 RWDD2AQ9UIY3 292 aa13.66□□□□□ -0.22
PRIM1-201ENST00000338193 GIT1Q9Y2X7 761 aa13.66□□□□□ -0.22
PRIM1-201ENST00000338193 SMIM28A0A1B0GU29 152 aa13.65□□□□□ -0.22
PRIM1-201ENST00000338193 INPPL1O15357 1258 aa13.65□□□□□ -0.22
PRIM1-201ENST00000338193 EXOC3O60645 756 aa13.65□□□□□ -0.22
PRIM1-201ENST00000338193 CA3P07451 260 aa13.65□□□□□ -0.22
PRIM1-201ENST00000338193 CYP24A1Q07973 514 aa13.65□□□□□ -0.22
PRIM1-201ENST00000338193 ADAM9Q13443 819 aa13.65□□□□□ -0.22
PRIM1-201ENST00000338193 EDRF1Q3B7T1 1238 aa13.65□□□□□ -0.22
PRIM1-201ENST00000338193 ARSIQ5FYB1 569 aa13.65□□□□□ -0.22
PRIM1-201ENST00000338193 GLB1LQ6UWU2 654 aa13.65□□□□□ -0.22
PRIM1-201ENST00000338193 TMEM173Q86WV6 379 aaPredicted RBP13.65□□□□□ -0.22
PRIM1-201ENST00000338193 OR5B17Q8NGF7 314 aa13.65□□□□□ -0.22
PRIM1-201ENST00000338193 BCL7CQ8WUZ0 217 aaPredicted RBP13.65□□□□□ -0.22
PRIM1-201ENST00000338193 ZNF516Q92618 1163 aa13.65□□□□□ -0.22
PRIM1-201ENST00000338193 PGBD4Q96DM1 585 aa13.65□□□□□ -0.22
PRIM1-201ENST00000338193 PPP1R10Q96QC0 940 aaKnown RBP13.65□□□□□ -0.22
PRIM1-201ENST00000338193 ZBED2Q9BTP6 218 aa13.65□□□□□ -0.22
PRIM1-201ENST00000338193 TMEM117Q9H0C3 514 aa13.65□□□□□ -0.22
PRIM1-201ENST00000338193 NKX2-4Q9H2Z4 354 aa13.65□□□□□ -0.22
PRIM1-201ENST00000338193 NRDE2Q9H7Z3 1164 aa13.65□□□□□ -0.22
PRIM1-201ENST00000338193 RPF1Q9H9Y2 349 aaKnown RBP13.65□□□□□ -0.22
PRIM1-201ENST00000338193 LINC01553A4QN01 128 aa13.64□□□□□ -0.23
PRIM1-201ENST00000338193 PPEF2O14830 753 aa13.64□□□□□ -0.23
PRIM1-201ENST00000338193 KIF20AO95235 890 aa13.64□□□□□ -0.23
PRIM1-201ENST00000338193 TRIM49P0CI25 452 aa13.64□□□□□ -0.23
PRIM1-201ENST00000338193 TRIM49CP0CI26 452 aa13.64□□□□□ -0.23
PRIM1-201ENST00000338193 KCNE1P15382 129 aa13.64□□□□□ -0.23
PRIM1-201ENST00000338193 SNRPFP62306 86 aaKnown RBP13.64□□□□□ -0.23
PRIM1-201ENST00000338193 LRRC63Q05C16 580 aa13.64□□□□□ -0.23
PRIM1-201ENST00000338193 STIM1Q13586 685 aa13.64□□□□□ -0.23
PRIM1-201ENST00000338193 NCAPHQ15003 741 aa13.64□□□□□ -0.23
PRIM1-201ENST00000338193 ZBTB6Q15916 424 aa13.64□□□□□ -0.23
PRIM1-201ENST00000338193 GOLGA5Q8TBA6 731 aa13.64□□□□□ -0.23
PRIM1-201ENST00000338193 TMEM174Q8WUU8 243 aa13.64□□□□□ -0.23
PRIM1-201ENST00000338193 ELMO3Q96BJ8 720 aa13.64□□□□□ -0.23
PRIM1-201ENST00000338193 MFSD14AQ96MC6 490 aa13.64□□□□□ -0.23
PRIM1-201ENST00000338193 RAD9AQ99638 391 aa13.64□□□□□ -0.23
PRIM1-201ENST00000338193 SRRTQ9BXP5 876 aaKnown RBP13.64□□□□□ -0.23
PRIM1-201ENST00000338193 HSD3B7Q9H2F3 369 aa13.64□□□□□ -0.23
PRIM1-201ENST00000338193 MTIF3Q9H2K0 278 aaKnown RBP13.64□□□□□ -0.23
PRIM1-201ENST00000338193 SAMSN1Q9NSI8 373 aaKnown RBP13.64□□□□□ -0.23
PRIM1-201ENST00000338193 ANO10Q9NW15 660 aa13.64□□□□□ -0.23
PRIM1-201ENST00000338193 CGNQ9P2M7 1197 aaKnown RBP13.64□□□□□ -0.23
PRIM1-201ENST00000338193 PLXNA4Q9HCM2 1894 aa13.64□□□□□ -0.23
PRIM1-201ENST00000338193 COL4A4P53420 1690 aaPredicted RBP13.64□□□□□ -0.23
PRIM1-201ENST00000338193 SZT2Q5T011 3432 aa13.64□□□□□ -0.23
PRIM1-201ENST00000338193 REV3LO60673 3130 aa13.63□□□□□ -0.23
PRIM1-201ENST00000338193 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.63□□□□□ -0.23
PRIM1-201ENST00000338193 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.63□□□□□ -0.23
PRIM1-201ENST00000338193 CASTOR2A6NHX0 329 aa13.63□□□□□ -0.23
PRIM1-201ENST00000338193 ZNF233A6NK53 670 aa13.63□□□□□ -0.23
PRIM1-201ENST00000338193 LRRIQ3A6PVS8 624 aaPredicted RBP13.63□□□□□ -0.23
PRIM1-201ENST00000338193 NT5C1B-RDH14C9J2C7 533 aa13.63□□□□□ -0.23
PRIM1-201ENST00000338193 SLC11A1P49279 550 aa13.63□□□□□ -0.23
PRIM1-201ENST00000338193 LSM11P83369 360 aaKnown RBP eCLIP13.63□□□□□ -0.23
PRIM1-201ENST00000338193 PPP2R3AQ06190 1150 aa13.63□□□□□ -0.23
PRIM1-201ENST00000338193 BTG3Q14201 252 aaPredicted RBP13.63□□□□□ -0.23
PRIM1-201ENST00000338193 DHX40Q8IX18 779 aaKnown RBP13.63□□□□□ -0.23
PRIM1-201ENST00000338193 COLGALT2Q8IYK4 626 aa13.63□□□□□ -0.23
PRIM1-201ENST00000338193 FAM186BQ8IYM0 893 aa13.63□□□□□ -0.23
PRIM1-201ENST00000338193 CMTR2Q8IYT2 770 aaKnown RBP13.63□□□□□ -0.23
PRIM1-201ENST00000338193 CSGALNACT2Q8N6G5 542 aa13.63□□□□□ -0.23
PRIM1-201ENST00000338193 AOPEPQ8N6M6 819 aa13.63□□□□□ -0.23
PRIM1-201ENST00000338193 CCDC127Q96BQ5 260 aa13.63□□□□□ -0.23
PRIM1-201ENST00000338193 LRCH3Q96II8 777 aa13.63□□□□□ -0.23
PRIM1-201ENST00000338193 TSG101Q99816 390 aa13.63□□□□□ -0.23
PRIM1-201ENST00000338193 C17orf80Q9BSJ5 609 aa13.63□□□□□ -0.23
PRIM1-201ENST00000338193 GTPBP4Q9BZE4 634 aaKnown RBP13.63□□□□□ -0.23
PRIM1-201ENST00000338193 CERS4Q9HA82 394 aa13.63□□□□□ -0.23
PRIM1-201ENST00000338193 INSL6Q9Y581 213 aa13.63□□□□□ -0.23
PRIM1-201ENST00000338193 ATG2AQ2TAZ0 1938 aa13.63□□□□□ -0.23
PRIM1-201ENST00000338193 EPOPA6NHQ4 379 aa13.62□□□□□ -0.23
PRIM1-201ENST00000338193 LRRN2O75325 713 aa13.62□□□□□ -0.23
PRIM1-201ENST00000338193 LDHAP00338 332 aaKnown RBP13.62□□□□□ -0.23
PRIM1-201ENST00000338193 ITGB1P05556 798 aa13.62□□□□□ -0.23
PRIM1-201ENST00000338193 CCDC192P0DO97 292 aa13.62□□□□□ -0.23
PRIM1-201ENST00000338193 DNAJB2P25686 324 aa13.62□□□□□ -0.23
PRIM1-201ENST00000338193 ERCC5P28715 1186 aaPredicted RBP13.62□□□□□ -0.23
PRIM1-201ENST00000338193 YARSP54577 528 aaKnown RBP13.62□□□□□ -0.23
PRIM1-201ENST00000338193 FKBP3Q00688 224 aaKnown RBP13.62□□□□□ -0.23
PRIM1-201ENST00000338193 TAP1Q03518 808 aa13.62□□□□□ -0.23
PRIM1-201ENST00000338193 DSC1Q08554 894 aa13.62□□□□□ -0.23
PRIM1-201ENST00000338193 MYBPC2Q14324 1141 aa13.62□□□□□ -0.23
PRIM1-201ENST00000338193 PSMD6Q15008 389 aa13.62□□□□□ -0.23
PRIM1-201ENST00000338193 IQCB1Q15051 598 aa13.62□□□□□ -0.23
PRIM1-201ENST00000338193 CD300LGQ6UXG3 332 aa13.62□□□□□ -0.23
PRIM1-201ENST00000338193 APBB1IPQ7Z5R6 666 aaPredicted RBP13.62□□□□□ -0.23
PRIM1-201ENST00000338193 HACE1Q8IYU2 909 aa13.62□□□□□ -0.23
PRIM1-201ENST00000338193 ABI1Q8IZP0 508 aa13.62□□□□□ -0.23
PRIM1-201ENST00000338193 C3orf58Q8NDZ4 430 aa13.62□□□□□ -0.23
PRIM1-201ENST00000338193 CXorf38Q8TB03 319 aa13.62□□□□□ -0.23
PRIM1-201ENST00000338193 RPS6KC1Q96S38 1066 aa13.62□□□□□ -0.23
PRIM1-201ENST00000338193 MTUS1Q9ULD2 1270 aa13.62□□□□□ -0.23
PRIM1-201ENST00000338193 PCDHA11Q9Y5I1 949 aa13.62□□□□□ -0.23
PRIM1-201ENST00000338193 TRIOBPQ9H2D6 2365 aa13.61□□□□□ -0.23
PRIM1-201ENST00000338193 BICDL2A1A5D9 508 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms