RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ZNF839A8K0R7 811 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 TCF3P15923 654 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 C16orf72Q14CZ0 275 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 TERB1Q8NA31 727 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 OXER1Q8TDS5 423 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 PFASO15067 1338 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 APOL1O14791 398 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 ASNA1O43681 348 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 SMNDC1O75940 238 aaKnown RBP eCLIP10.31□□□□□ -0.76
COL4A6-201ENST00000334504 VAMP7P51809 220 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 CACNA2D1P54289 1103 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 SNAP25P60880 206 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 TRIM71Q2Q1W2 868 aaKnown RBP10.31□□□□□ -0.76
COL4A6-201ENST00000334504 KCTD21Q4G0X4 260 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 SYDE2Q5VT97 1194 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 ITPRIPL1Q6GPH6 555 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 MTHFD1LQ6UB35 978 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 OLFML1Q6UWY5 402 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 NDUFAF2Q8N183 169 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 FAM210AQ96ND0 272 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 SH3GLB2Q9NR46 395 aa10.31□□□□□ -0.76
COL4A6-201ENST00000334504 CYP2D7A0A087X1C5 515 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 HOXA13P31271 388 aaPredicted RBP10.3□□□□□ -0.76
COL4A6-201ENST00000334504 CCDC157Q569K6 752 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 ARMCX4Q5H9R4 360 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 TAS2R42Q7RTR8 314 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 OR6P1Q8NGX9 317 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 NEU2Q9Y3R4 380 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 AP3B1O00203 1094 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 FOXP2O15409 715 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 PDE8BO95263 885 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 MYL2P10916 166 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 HMOX2P30519 316 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 SESN2P58004 480 aaPredicted RBP10.3□□□□□ -0.76
COL4A6-201ENST00000334504 ZNF200P98182 395 aaPredicted RBP10.3□□□□□ -0.76
COL4A6-201ENST00000334504 CHI3L2Q15782 390 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 ZNF699Q32M78 642 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 BNIPLQ7Z465 357 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 OPTNQ96CV9 577 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 AGPAT1Q99943 283 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 ROPN1BQ9BZX4 212 aaPredicted RBP10.3□□□□□ -0.76
COL4A6-201ENST00000334504 ROPN1Q9HAT0 212 aaPredicted RBP10.3□□□□□ -0.76
COL4A6-201ENST00000334504 SYTL2Q9HCH5 934 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 XPO7Q9UIA9 1087 aaKnown RBP10.3□□□□□ -0.76
COL4A6-201ENST00000334504 WDR17Q8IZU2 1322 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 CLDN3O15551 220 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 KCNN4O15554 427 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 CLPTM1O96005 669 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 LDHAP00338 332 aaKnown RBP10.3□□□□□ -0.76
COL4A6-201ENST00000334504 KRT16P08779 473 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 SDC4P31431 198 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 LRRC74AQ0VAA2 488 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 KNOP1Q1ED39 458 aaKnown RBP10.3□□□□□ -0.76
COL4A6-201ENST00000334504 RSBN1Q5VWQ0 802 aaPredicted RBP10.3□□□□□ -0.76
COL4A6-201ENST00000334504 SLC35G2Q8TBE7 412 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 H2AFY2Q9P0M6 372 aaPredicted RBP10.3□□□□□ -0.76
COL4A6-201ENST00000334504 YEATS2Q9ULM3 1422 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 ZNF518AQ6AHZ1 1483 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 K7ERI5 159 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 PCCAP05165 728 aaPredicted RBP10.3□□□□□ -0.76
COL4A6-201ENST00000334504 COPAP53621 1224 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 MKRN4PQ13434 485 aaPredicted RBP10.3□□□□□ -0.76
COL4A6-201ENST00000334504 SLC27A3Q5K4L6 730 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 XXYLT1Q8NBI6 393 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 MYCBPAPQ8TBZ2 947 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 PGBD4Q96DM1 585 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 DYNLL2Q96FJ2 89 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 CATSPER2Q96P56 530 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 SHCBP1LQ9BZQ2 653 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 C5orf58C9J3I9 102 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 RXRBP28702 533 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 KCNJ6P48051 423 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 NUDT2P50583 147 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 SPDYAQ5MJ70 313 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 IZUMO2Q6UXV1 221 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 DSTYKQ6XUX3 929 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 NOA1Q8NC60 698 aaKnown RBP10.3□□□□□ -0.76
COL4A6-201ENST00000334504 ELMO2Q96JJ3 720 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 FAM213AQ9BRX8 229 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 KLHL4Q9C0H6 718 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 PARVBQ9HBI1 364 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 ZDHHC9Q9Y397 364 aa10.3□□□□□ -0.76
COL4A6-201ENST00000334504 LIFRP42702 1097 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 OVGP1Q12889 678 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 TRMT2AQ8IZ69 625 aaKnown RBP10.29□□□□□ -0.76
COL4A6-201ENST00000334504 OSBPL10Q9BXB5 764 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 DHX35Q9H5Z1 703 aaKnown RBP10.29□□□□□ -0.76
COL4A6-201ENST00000334504 TASP1Q9H6P5 420 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 NOL6Q9H6R4 1146 aaKnown RBP10.29□□□□□ -0.76
COL4A6-201ENST00000334504 PRG3Q9Y2Y8 225 aaPredicted RBP10.29□□□□□ -0.76
COL4A6-201ENST00000334504 GPATCH8Q9UKJ3 1502 aaKnown RBP10.29□□□□□ -0.76
COL4A6-201ENST00000334504 PVALEFA0A1B0GWK0 134 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 USP17L3A6NCW0 530 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 USP17L4A6NCW7 530 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 CDH6P55285 790 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 DNAJC3Q13217 504 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 PI16Q6UXB8 463 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 BARGINQ6ZT62 677 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 USP17L1Q7RTZ2 530 aa10.29□□□□□ -0.76
COL4A6-201ENST00000334504 THNSL1Q8IYQ7 743 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms