RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 GPR88Q9GZN0 384 aa25.13■■□□□ 1.61
TSEN54-201ENST00000333213 DNAJC12Q9UKB3 198 aa25.13■■□□□ 1.61
TSEN54-201ENST00000333213 FAM26DQ5JW98 314 aa25.12■■□□□ 1.61
TSEN54-201ENST00000333213 TSC1Q92574 1164 aa25.12■■□□□ 1.61
TSEN54-201ENST00000333213 MTMR12Q9C0I1 747 aa25.12■■□□□ 1.61
TSEN54-201ENST00000333213 NXF3Q9H4D5 531 aaKnown RBP25.12■■□□□ 1.61
TSEN54-201ENST00000333213 SNTG2Q9NY99 539 aa25.12■■□□□ 1.61
TSEN54-201ENST00000333213 MROH7Q68CQ1 1323 aa25.12■■□□□ 1.61
TSEN54-201ENST00000333213 KIF2AO00139 706 aaPredicted RBP25.12■■□□□ 1.61
TSEN54-201ENST00000333213 PLEKP08567 350 aaPredicted RBP25.12■■□□□ 1.61
TSEN54-201ENST00000333213 PNMA6AP0CW24 399 aaPredicted RBP25.12■■□□□ 1.61
TSEN54-201ENST00000333213 CKBP12277 381 aa25.12■■□□□ 1.61
TSEN54-201ENST00000333213 FBXO47Q5MNV8 452 aa25.12■■□□□ 1.61
TSEN54-201ENST00000333213 U2AF1L4Q8WU68 220 aaKnown RBP25.12■■□□□ 1.61
TSEN54-201ENST00000333213 KAT5Q92993 513 aa25.12■■□□□ 1.61
TSEN54-201ENST00000333213 C16orf45Q96MC5 204 aaPredicted RBP25.12■■□□□ 1.61
TSEN54-201ENST00000333213 ACAP3Q96P50 834 aa25.12■■□□□ 1.61
TSEN54-201ENST00000333213 ARHGAP20Q9P2F6 1191 aa25.12■■□□□ 1.61
TSEN54-201ENST00000333213 CST3P01034 146 aaPredicted RBP25.11■■□□□ 1.61
TSEN54-201ENST00000333213 NFICP08651 508 aa25.11■■□□□ 1.61
TSEN54-201ENST00000333213 POU5F1Q01860 360 aaKnown RBP25.11■■□□□ 1.61
TSEN54-201ENST00000333213 NFX1Q12986 1120 aaKnown RBP25.11■■□□□ 1.61
TSEN54-201ENST00000333213 RAPGEF1Q13905 1077 aa25.11■■□□□ 1.61
TSEN54-201ENST00000333213 HGSNATQ68CP4 663 aa25.11■■□□□ 1.61
TSEN54-201ENST00000333213 TOGARAM2Q6ZUX3 1019 aa25.11■■□□□ 1.61
TSEN54-201ENST00000333213 FAM126BQ8IXS8 530 aa25.11■■□□□ 1.61
TSEN54-201ENST00000333213 ARMC5Q96C12 935 aa25.11■■□□□ 1.61
TSEN54-201ENST00000333213 SGPL1O95470 568 aa25.1■■□□□ 1.61
TSEN54-201ENST00000333213 HLA-DRAP01903 254 aa25.1■■□□□ 1.61
TSEN54-201ENST00000333213 GHRP10912 638 aa25.1■■□□□ 1.61
TSEN54-201ENST00000333213 KCNJ6P48051 423 aa25.1■■□□□ 1.61
TSEN54-201ENST00000333213 BIRC3Q13489 604 aa25.1■■□□□ 1.61
TSEN54-201ENST00000333213 LPIN1Q14693 890 aa25.1■■□□□ 1.61
TSEN54-201ENST00000333213 SURF1Q15526 300 aa25.1■■□□□ 1.61
TSEN54-201ENST00000333213 CYP26C1Q6V0L0 522 aa25.1■■□□□ 1.61
TSEN54-201ENST00000333213 TMTC1Q8IUR5 882 aa25.1■■□□□ 1.61
TSEN54-201ENST00000333213 HELQQ8TDG4 1101 aa25.1■■□□□ 1.61
TSEN54-201ENST00000333213 TATDN2Q93075 761 aa25.1■■□□□ 1.61
TSEN54-201ENST00000333213 USP27XA6NNY8 438 aa25.1■■□□□ 1.61
TSEN54-201ENST00000333213 NRDCO43847 1150 aa25.1■■□□□ 1.61
TSEN54-201ENST00000333213 IL18RAPO95256 599 aa25.1■■□□□ 1.61
TSEN54-201ENST00000333213 TFAMQ00059 246 aaKnown RBP25.1■■□□□ 1.61
TSEN54-201ENST00000333213 KYAT1Q16773 422 aa25.1■■□□□ 1.61
TSEN54-201ENST00000333213 JADE1Q6IE81 842 aa25.1■■□□□ 1.61
TSEN54-201ENST00000333213 NYAP1Q6ZVC0 841 aa25.1■■□□□ 1.61
TSEN54-201ENST00000333213 TRAPPC11Q7Z392 1133 aa25.1■■□□□ 1.61
TSEN54-201ENST00000333213 RNF39Q9H2S5 420 aa25.1■■□□□ 1.61
TSEN54-201ENST00000333213 UBE2TQ9NPD8 197 aaPredicted RBP25.1■■□□□ 1.61
TSEN54-201ENST00000333213 AIPL1Q9NZN9 384 aa25.1■■□□□ 1.61
TSEN54-201ENST00000333213 CD52P31358 61 aa25.09■■□□□ 1.61
TSEN54-201ENST00000333213 MBTPS1Q14703 1052 aa25.09■■□□□ 1.61
TSEN54-201ENST00000333213 DUOXA2Q1HG44 320 aa25.09■■□□□ 1.61
TSEN54-201ENST00000333213 TSR1Q2NL82 804 aaKnown RBP25.09■■□□□ 1.61
TSEN54-201ENST00000333213 SMG8Q8ND04 991 aaKnown RBP25.09■■□□□ 1.61
TSEN54-201ENST00000333213 SYN2Q92777 582 aaPredicted RBP25.09■■□□□ 1.61
TSEN54-201ENST00000333213 KREMEN1Q96MU8 473 aa25.09■■□□□ 1.61
TSEN54-201ENST00000333213 SPAG5Q96R06 1193 aa25.09■■□□□ 1.61
TSEN54-201ENST00000333213 STK33Q9BYT3 514 aa25.09■■□□□ 1.61
TSEN54-201ENST00000333213 ERVK-5Q9HDB9 667 aa25.09■■□□□ 1.61
TSEN54-201ENST00000333213 PADI3Q9ULW8 664 aa25.09■■□□□ 1.61
TSEN54-201ENST00000333213 CD4P01730 458 aa25.08■■□□□ 1.61
TSEN54-201ENST00000333213 CTCFP49711 727 aaPredicted RBP25.08■■□□□ 1.61
TSEN54-201ENST00000333213 CDK17Q00537 523 aa25.08■■□□□ 1.61
TSEN54-201ENST00000333213 DRAP1Q14919 205 aaPredicted RBP25.08■■□□□ 1.61
TSEN54-201ENST00000333213 SFMBT2Q5VUG0 894 aa25.08■■□□□ 1.61
TSEN54-201ENST00000333213 IRF2BP2Q7Z5L9 587 aa25.08■■□□□ 1.61
TSEN54-201ENST00000333213 TRIM6Q9C030 488 aaPredicted RBP25.08■■□□□ 1.61
TSEN54-201ENST00000333213 ASB7Q9H672 318 aa25.08■■□□□ 1.61
TSEN54-201ENST00000333213 F8VZ95 297 aa25.08■■□□□ 1.6
TSEN54-201ENST00000333213 AKAP5P24588 427 aa25.08■■□□□ 1.6
TSEN54-201ENST00000333213 PIK3CAP42336 1068 aa25.08■■□□□ 1.6
TSEN54-201ENST00000333213 AP3M2P53677 418 aa25.08■■□□□ 1.6
TSEN54-201ENST00000333213 ARHGAP44Q17R89 818 aa25.08■■□□□ 1.6
TSEN54-201ENST00000333213 TWF2Q6IBS0 349 aaKnown RBP25.08■■□□□ 1.6
TSEN54-201ENST00000333213 SPOPLQ6IQ16 392 aa25.08■■□□□ 1.6
TSEN54-201ENST00000333213 ZMAT2Q96NC0 199 aaKnown RBP25.08■■□□□ 1.6
TSEN54-201ENST00000333213 DESI2Q9BSY9 194 aa25.08■■□□□ 1.6
TSEN54-201ENST00000333213 NUCKS1Q9H1E3 243 aaKnown RBP25.08■■□□□ 1.6
TSEN54-201ENST00000333213 NHEJ1Q9H9Q4 299 aaPredicted RBP25.08■■□□□ 1.6
TSEN54-201ENST00000333213 APOBEC3GQ9HC16 384 aaKnown RBP25.08■■□□□ 1.6
TSEN54-201ENST00000333213 ZNHIT6Q9NWK9 470 aaKnown RBP25.08■■□□□ 1.6
TSEN54-201ENST00000333213 MYO6Q9UM54 1294 aa25.08■■□□□ 1.6
TSEN54-201ENST00000333213 IPPQ9Y573 584 aa25.08■■□□□ 1.6
TSEN54-201ENST00000333213 CAND2O75155 1236 aa25.07■■□□□ 1.6
TSEN54-201ENST00000333213 TFRCP02786 760 aaKnown RBP25.07■■□□□ 1.6
TSEN54-201ENST00000333213 ARID5AQ03989 594 aa25.07■■□□□ 1.6
TSEN54-201ENST00000333213 NCOA4Q13772 614 aa25.07■■□□□ 1.6
TSEN54-201ENST00000333213 ALKAL1Q6UXT8 129 aa25.07■■□□□ 1.6
TSEN54-201ENST00000333213 PPM1KQ8N3J5 372 aa25.07■■□□□ 1.6
TSEN54-201ENST00000333213 CXorf38Q8TB03 319 aa25.07■■□□□ 1.6
TSEN54-201ENST00000333213 CITO14578 2027 aa25.07■■□□□ 1.6
TSEN54-201ENST00000333213 GPR182O15218 404 aa25.06■■□□□ 1.6
TSEN54-201ENST00000333213 MGEA5O60502 916 aa25.06■■□□□ 1.6
TSEN54-201ENST00000333213 RECQL4O94761 1208 aa25.06■■□□□ 1.6
TSEN54-201ENST00000333213 TUBB4AP04350 444 aa25.06■■□□□ 1.6
TSEN54-201ENST00000333213 ATN1P54259 1190 aaPredicted RBP25.06■■□□□ 1.6
TSEN54-201ENST00000333213 PKN2Q16513 984 aaKnown RBP25.06■■□□□ 1.6
TSEN54-201ENST00000333213 DIS3LQ8TF46 1054 aaKnown RBP25.06■■□□□ 1.6
TSEN54-201ENST00000333213 SNX27Q96L92 541 aa25.06■■□□□ 1.6
TSEN54-201ENST00000333213 APOL6Q9BWW8 343 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms