RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 EDEM3Q9BZQ6 932 aa13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 CXCL16Q9H2A7 254 aa13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 HIPK3Q9H422 1215 aa13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 PLEKHA5Q9HAU0 1116 aa13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 ABHD10Q9NUJ1 306 aa13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 FAM105AQ9NUU6 356 aa13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 FBXL5Q9UKA1 691 aa13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 AJAP1Q9UKB5 411 aaPredicted RBP13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 TBX21Q9UL17 535 aa13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 LUC7L2Q9Y383 392 aaKnown RBP13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 PCDHB2Q9Y5E7 798 aa13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 FHOD1Q9Y613 1164 aa13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 SCN5AQ14524 2016 aa13.06□□□□□ -0.32
TRIM49B-201ENST00000332682 VNN1O95497 513 aa13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 TMEM191BP0C7N4 346 aa13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 ZSCAN20P17040 1043 aaPredicted RBP13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 AKAP5P24588 427 aa13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 YARSP54577 528 aaKnown RBP13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 POLR2FP61218 127 aaKnown RBP13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 TFAMQ00059 246 aaKnown RBP13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 BIRC3Q13489 604 aa13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 DUOXA2Q1HG44 320 aa13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 LRRC26Q2I0M4 334 aa13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 ALKAL1Q6UXT8 129 aa13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 NECAB2Q7Z6G3 386 aa13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 CD302Q8IX05 232 aa13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 PANX2Q96RD6 677 aa13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 DNAJC7Q99615 494 aa13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 APOL6Q9BWW8 343 aa13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 WNT8AQ9H1J5 351 aa13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 RNF39Q9H2S5 420 aa13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 NLRC4Q9NPP4 1024 aa13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 RAB20Q9NX57 234 aa13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 CNTN3Q9P232 1028 aa13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 APEX2Q9UBZ4 518 aa13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 ATP11BQ9Y2G3 1177 aa13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 C2CD2Q9Y426 696 aa13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRIM49B-201ENST00000332682 HLA-DRAP01903 254 aa13.04□□□□□ -0.32
TRIM49B-201ENST00000332682 PIK3CAP42336 1068 aa13.04□□□□□ -0.32
TRIM49B-201ENST00000332682 CCZ1BP86790 482 aa13.04□□□□□ -0.32
TRIM49B-201ENST00000332682 CCZ1P86791 482 aaPredicted RBP13.04□□□□□ -0.32
TRIM49B-201ENST00000332682 TMEM132DQ14C87 1099 aa13.04□□□□□ -0.32
TRIM49B-201ENST00000332682 SCARA3Q6AZY7 606 aa13.04□□□□□ -0.32
TRIM49B-201ENST00000332682 IQCEQ6IPM2 695 aa13.04□□□□□ -0.32
TRIM49B-201ENST00000332682 PHLDB3Q6NSJ2 640 aa13.04□□□□□ -0.32
TRIM49B-201ENST00000332682 GJB7Q6PEY0 223 aa13.04□□□□□ -0.32
TRIM49B-201ENST00000332682 TRAPPC11Q7Z392 1133 aa13.04□□□□□ -0.32
TRIM49B-201ENST00000332682 CACNA2D4Q7Z3S7 1137 aa13.04□□□□□ -0.32
TRIM49B-201ENST00000332682 TMEM139Q8IV31 216 aa13.04□□□□□ -0.32
TRIM49B-201ENST00000332682 TET1Q8NFU7 2136 aa13.04□□□□□ -0.32
TRIM49B-201ENST00000332682 ZMAT2Q96NC0 199 aaKnown RBP13.04□□□□□ -0.32
TRIM49B-201ENST00000332682 ADAM2Q99965 735 aa13.04□□□□□ -0.32
TRIM49B-201ENST00000332682 NAA15Q9BXJ9 866 aaKnown RBP13.04□□□□□ -0.32
TRIM49B-201ENST00000332682 A0A0U1RQF3 1178 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 LRRC53A6NM62 1247 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 MEIS3P2A8K0S8 358 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 ZNF623O75123 536 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 ZC3H11AO75152 810 aaKnown RBP eCLIP13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 TNNC2P02585 160 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 CLTBP09497 229 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 RFX1P22670 979 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 FECHP22830 423 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 RAB27AP51159 221 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 NCOA4Q13772 614 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 XKR4Q5GH76 650 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 E4F1Q66K89 784 aaPredicted RBP13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 PDXDC1Q6P996 788 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 RRAGAQ7L523 313 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 UBE2Q1Q7Z7E8 422 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 NT5DC4Q86YG4 428 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 ARHGEF19Q8IW93 802 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 C1orf127Q8N9H9 656 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 ZNF397Q8NF99 534 aaPredicted RBP13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 OR8K1Q8NGG5 319 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 CXorf38Q8TB03 319 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 LINC01599Q8WXQ3 324 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 KIF12Q96FN5 646 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 ANKRD36BP1Q96IX9 119 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 PI4K2AQ9BTU6 479 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 PPP1R12CQ9BZL4 782 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 KLK14Q9P0G3 267 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 PARP2Q9UGN5 583 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 DERAQ9Y315 318 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 DAAM1Q9Y4D1 1078 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 MKI67P46013 3256 aaKnown RBP13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 PHACTR2O75167 634 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 KCNE1P15382 129 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 ATF7P17544 494 aaPredicted RBP13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 EN2P19622 333 aaPredicted RBP13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 HNRNPH3P31942 346 aaKnown RBP13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 JAM2P57087 298 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 RAPGEF1Q13905 1077 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 PLEKHG4Q58EX7 1191 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 GLRA4Q5JXX5 417 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 MRPL10Q7Z7H8 261 aaKnown RBP13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 HACE1Q8IYU2 909 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 TMEM130Q8N3G9 435 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 CCDC112Q8NEF3 446 aa13.03□□□□□ -0.32
TRIM49B-201ENST00000332682 HELQQ8TDG4 1101 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms