RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 SERPINB4P48594 390 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 RARRES1P49788 294 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 FOXD4L6Q3SYB3 417 aaPredicted RBP7.03□□□□□ -1.28
SMG1-201ENST00000330588 TTC38Q5R3I4 469 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 FOXD4L3Q6VB84 417 aaPredicted RBP7.03□□□□□ -1.28
SMG1-201ENST00000330588 MRPL10Q7Z7H8 261 aaKnown RBP7.03□□□□□ -1.28
SMG1-201ENST00000330588 FERMT3Q86UX7 667 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 RHPN2Q8IUC4 686 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 COLGALT1Q8NBJ5 622 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 MCPH1Q8NEM0 835 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 SPPL3Q8TCT6 385 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 PGBD4Q96DM1 585 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 SCLT1Q96NL6 688 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 CASD1Q96PB1 797 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 NACC1Q96RE7 527 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 UIMC1Q96RL1 719 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 RAB34Q9BZG1 259 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 CWH43Q9H720 699 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 UBN1Q9NPG3 1134 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 RNF19AQ9NV58 838 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 PRKAG3Q9UGI9 489 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 MTUS1Q9ULD2 1270 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 GINS2Q9Y248 185 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 CNTNAP2Q9UHC6 1331 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 A0A087WZ62 844 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 TBKBP1A7MCY6 615 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 FSCN2O14926 492 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 ATF7P17544 494 aaPredicted RBP7.03□□□□□ -1.28
SMG1-201ENST00000330588 NPEPPSP55786 919 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 PTENP60484 403 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 LAMTOR4Q0VGL1 99 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 DRP2Q13474 957 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 FAM187BQ17R55 369 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 RILPL1Q5EBL4 403 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 XKR9Q5GH70 373 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 PLA2G4FQ68DD2 849 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 RAB44Q7Z6P3 723 aaPredicted RBP7.03□□□□□ -1.28
SMG1-201ENST00000330588 TPH2Q8IWU9 490 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 C4orf32Q8N8J7 132 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 IGSF22Q8N9C0 903 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 PRPF31Q8WWY3 499 aaKnown RBP7.03□□□□□ -1.28
SMG1-201ENST00000330588 PPM1EQ8WY54 764 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 ZNF558Q96NG5 402 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 FDXACB1Q9BRP7 624 aaPredicted RBP7.03□□□□□ -1.28
SMG1-201ENST00000330588 C2orf49Q9BVC5 232 aaPredicted RBP7.03□□□□□ -1.28
SMG1-201ENST00000330588 XPNPEP1Q9NQW7 623 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 FAM105AQ9NUU6 356 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 RGL1Q9NZL6 768 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 KANSL3Q9P2N6 904 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 SEPT3Q9UH03 358 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.03□□□□□ -1.28
SMG1-201ENST00000330588 PHLPP2Q6ZVD8 1323 aa7.03□□□□□ -1.28
SMG1-201ENST00000330588 LAMA3Q16787 3333 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 TMEM150BA6NC51 233 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 GRM6O15303 877 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 DYRK3O43781 588 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 BMP15O95972 392 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 NCLP19338 710 aaKnown RBP7.02□□□□□ -1.29
SMG1-201ENST00000330588 MCM7P33993 719 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 ARL2P36404 184 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 TXKP42681 527 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 NCBP1Q09161 790 aaKnown RBP7.02□□□□□ -1.29
SMG1-201ENST00000330588 HYAL1Q12794 435 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 ADAM15Q13444 863 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 GNL2Q13823 731 aaKnown RBP7.02□□□□□ -1.29
SMG1-201ENST00000330588 CAMK1Q14012 370 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 GIT2Q14161 759 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 CTTNQ14247 550 aaKnown RBP7.02□□□□□ -1.29
SMG1-201ENST00000330588 BMS1Q14692 1282 aaKnown RBP7.02□□□□□ -1.29
SMG1-201ENST00000330588 TCEAL5Q5H9L2 206 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 FAM102BQ5T8I3 360 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 ARL6IP4Q66PJ3 421 aaKnown RBP7.02□□□□□ -1.29
SMG1-201ENST00000330588 CDCA2Q69YH5 1023 aaPredicted RBP7.02□□□□□ -1.29
SMG1-201ENST00000330588 NOTUMQ6P988 496 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 TMEM184AQ6ZMB5 413 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 CATSPER4Q7RTX7 472 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 GPR65Q8IYL9 337 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 ABI1Q8IZP0 508 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 EFHBQ8N7U6 833 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 KLHL23Q8NBE8 558 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 MRPS27Q92552 414 aaKnown RBP7.02□□□□□ -1.29
SMG1-201ENST00000330588 TMX3Q96JJ7 454 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 NLRP4Q96MN2 994 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 CCDC43Q96MW1 224 aaKnown RBP7.02□□□□□ -1.29
SMG1-201ENST00000330588 UHRF1Q96T88 793 aaPredicted RBP7.02□□□□□ -1.29
SMG1-201ENST00000330588 TIPINQ9BVW5 301 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 C2orf40Q9H1Z8 148 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 TMEM60Q9H2L4 133 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 PLXNA4Q9HCM2 1894 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 NGRNQ9NPE2 291 aaKnown RBP7.02□□□□□ -1.29
SMG1-201ENST00000330588 SPG21Q9NZD8 308 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 PUF60Q9UHX1 559 aaKnown RBP7.02□□□□□ -1.29
SMG1-201ENST00000330588 IRAK3Q9Y616 596 aa7.02□□□□□ -1.29
SMG1-201ENST00000330588 FGF18O76093 207 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 ERLIN2O94905 339 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 EYA4O95677 639 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 C1RP00736 705 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 SRGAP2BP0DMP2 458 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 SCP2P22307 547 aa7.01□□□□□ -1.29
SMG1-201ENST00000330588 HOXA11P31270 313 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms