RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 DIAPH2O60879 1101 aa10.76□□□□□ -0.69
CHD3-201ENST00000330494 DGAT1O75907 488 aa10.76□□□□□ -0.69
CHD3-201ENST00000330494 TAC1P20366 129 aa10.76□□□□□ -0.69
CHD3-201ENST00000330494 PRAMEP78395 509 aa10.76□□□□□ -0.69
CHD3-201ENST00000330494 DDX53Q86TM3 631 aaKnown RBP10.76□□□□□ -0.69
CHD3-201ENST00000330494 CCDC33Q8N5R6 958 aa10.76□□□□□ -0.69
CHD3-201ENST00000330494 TTC13Q8NBP0 860 aa10.76□□□□□ -0.69
CHD3-201ENST00000330494 RBM46Q8TBY0 533 aaKnown RBP10.76□□□□□ -0.69
CHD3-201ENST00000330494 SNX19Q92543 992 aa10.76□□□□□ -0.69
CHD3-201ENST00000330494 C18orf8Q96DM3 657 aa10.76□□□□□ -0.69
CHD3-201ENST00000330494 KRT82Q9NSB4 513 aa10.76□□□□□ -0.69
CHD3-201ENST00000330494 KRT37O76014 449 aa10.76□□□□□ -0.69
CHD3-201ENST00000330494 PAPOLAP51003 745 aaKnown RBP10.76□□□□□ -0.69
CHD3-201ENST00000330494 TPI1P60174 286 aa10.76□□□□□ -0.69
CHD3-201ENST00000330494 COPS2P61201 443 aa10.76□□□□□ -0.69
CHD3-201ENST00000330494 IMPG1Q17R60 797 aa10.76□□□□□ -0.69
CHD3-201ENST00000330494 ADSSL1Q8N142 457 aa10.76□□□□□ -0.69
CHD3-201ENST00000330494 RFFLQ8WZ73 363 aa10.76□□□□□ -0.69
CHD3-201ENST00000330494 ZNF512BQ96KM6 892 aaPredicted RBP10.76□□□□□ -0.69
CHD3-201ENST00000330494 ZFYVE28Q9HCC9 887 aa10.76□□□□□ -0.69
CHD3-201ENST00000330494 TJP2Q9UDY2 1190 aa10.76□□□□□ -0.69
CHD3-201ENST00000330494 MAPK13O15264 365 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 UCHL3P15374 230 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 CASP4P49662 377 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 KCNV1Q6PIU1 500 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 NDUFAF2Q8N183 169 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 GPRC5AQ8NFJ5 357 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 BTBD6Q96KE9 485 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 GALCP54803 685 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 C2CD6Q53TS8 623 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 RBBP8NLQ8NC74 664 aaPredicted RBP10.75□□□□□ -0.69
CHD3-201ENST00000330494 AKT1S1Q96B36 256 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 SNF8Q96H20 258 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 VPS39Q96JC1 886 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 L3MBTL3Q96JM7 780 aaPredicted RBP10.75□□□□□ -0.69
CHD3-201ENST00000330494 CLMNQ96JQ2 1002 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 TARS2Q9BW92 718 aaKnown RBP10.75□□□□□ -0.69
CHD3-201ENST00000330494 MAP3K20Q9NYL2 800 aaKnown RBP10.75□□□□□ -0.69
CHD3-201ENST00000330494 LMTK2Q8IWU2 1503 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 H0Y3Z8 333 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 H3BRJ5 948 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 CHEK2O96017 543 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 FDX1P10109 184 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 CAPRIN1Q14444 709 aaKnown RBP10.75□□□□□ -0.69
CHD3-201ENST00000330494 GNASQ5JWF2 1037 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 EMBQ6PCB8 327 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 CPB2Q96IY4 423 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 ZNF560Q96MR9 790 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 PARK7Q99497 189 aaKnown RBP10.75□□□□□ -0.69
CHD3-201ENST00000330494 EGFL8Q99944 293 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 YIPF3Q9GZM5 350 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 ZC3H4Q9UPT8 1303 aaKnown RBP10.75□□□□□ -0.69
CHD3-201ENST00000330494 PHEXP78562 749 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 HIBCHQ6NVY1 386 aaPredicted RBP10.75□□□□□ -0.69
CHD3-201ENST00000330494 CNPY4Q8N129 248 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 KAZALD1Q96I82 304 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 RUSC1Q9BVN2 902 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 SCOCQ9UIL1 159 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 GOLGA8QA0A0J9YX86 632 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 GOLGA8OA6NCC3 632 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 GOLGA8NF8WBI6 632 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 APOEP02649 317 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 APRTP07741 180 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 EEF1B2P24534 225 aaKnown RBP10.75□□□□□ -0.69
CHD3-201ENST00000330494 MGAT5BQ3V5L5 792 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 SLC30A10Q6XR72 485 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 PLEKHA5Q9HAU0 1116 aa10.75□□□□□ -0.69
CHD3-201ENST00000330494 TTI1O43156 1089 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 DNAJC6O75061 913 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 CSDE1O75534 798 aaKnown RBP10.74□□□□□ -0.69
CHD3-201ENST00000330494 HLA-DRAP01903 254 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 VTNP04004 478 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 SMARCA1P28370 1054 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 CDK17Q00537 523 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 CC2D1AQ6P1N0 951 aaPredicted RBP10.74□□□□□ -0.69
CHD3-201ENST00000330494 NCLNQ969V3 563 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 TAF1DQ9H5J8 278 aaPredicted RBP10.74□□□□□ -0.69
CHD3-201ENST00000330494 FBXL5Q9UKA1 691 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 ATP8B1O43520 1251 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 ORC6Q9Y5N6 252 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 PITPNM2Q9BZ72 1349 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 MYBL1P10243 752 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 RALAP11233 206 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 GTF2H1P32780 548 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 NNMTP40261 264 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 TTC8Q8TAM2 541 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 TNIP3Q96KP6 325 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 ZC4H2Q9NQZ6 224 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 DDX56Q9NY93 547 aaKnown RBP10.74□□□□□ -0.69
CHD3-201ENST00000330494 MYO1CO00159 1063 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 SRGNP10124 158 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 PDGFRAP16234 1089 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 PPARGP37231 505 aaPredicted RBP10.74□□□□□ -0.69
CHD3-201ENST00000330494 ZNF235Q14590 738 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 VEPH1Q14D04 833 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 FASTKD1Q53R41 847 aaKnown RBP10.74□□□□□ -0.69
CHD3-201ENST00000330494 HSP90AA5PQ58FG0 334 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 ELMSAN1Q6PJG2 1045 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 ARL8AQ96BM9 186 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 STK33Q9BYT3 514 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms