RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 VWA8A3KMH1 1905 aa16.49■□□□□ 0.23
CTHRC1-201ENST00000330295 C1QL1O75973 258 aa16.48■□□□□ 0.23
CTHRC1-201ENST00000330295 CHMLP26374 656 aa16.48■□□□□ 0.23
CTHRC1-201ENST00000330295 RDXP35241 583 aaKnown RBP16.48■□□□□ 0.23
CTHRC1-201ENST00000330295 ADCY7P51828 1080 aa16.48■□□□□ 0.23
CTHRC1-201ENST00000330295 NAPAP54920 295 aa16.48■□□□□ 0.23
CTHRC1-201ENST00000330295 PON2Q15165 354 aa16.48■□□□□ 0.23
CTHRC1-201ENST00000330295 ERICH6BQ5W0A0 696 aa16.48■□□□□ 0.23
CTHRC1-201ENST00000330295 WWC2Q6AWC2 1192 aa16.48■□□□□ 0.23
CTHRC1-201ENST00000330295 TYW1BQ6NUM6 668 aa16.48■□□□□ 0.23
CTHRC1-201ENST00000330295 PKN3Q6P5Z2 889 aa16.48■□□□□ 0.23
CTHRC1-201ENST00000330295 SRGAP1Q7Z6B7 1085 aa16.48■□□□□ 0.23
CTHRC1-201ENST00000330295 GSTCDQ8NEC7 633 aa16.48■□□□□ 0.23
CTHRC1-201ENST00000330295 ZSWIM3Q96MP5 696 aa16.48■□□□□ 0.23
CTHRC1-201ENST00000330295 CORO1BQ9BR76 489 aa16.48■□□□□ 0.23
CTHRC1-201ENST00000330295 SH2D3AQ9BRG2 576 aa16.48■□□□□ 0.23
CTHRC1-201ENST00000330295 PAAF1Q9BRP4 392 aa16.48■□□□□ 0.23
CTHRC1-201ENST00000330295 CCDC86Q9H6F5 360 aaKnown RBP16.48■□□□□ 0.23
CTHRC1-201ENST00000330295 TRPV4Q9HBA0 871 aa16.48■□□□□ 0.23
CTHRC1-201ENST00000330295 SLC8A2Q9UPR5 921 aa16.48■□□□□ 0.23
CTHRC1-201ENST00000330295 HECTD1Q9ULT8 2610 aa16.48■□□□□ 0.23
CTHRC1-201ENST00000330295 MYO18BQ8IUG5 2567 aa16.47■□□□□ 0.23
CTHRC1-201ENST00000330295 TMEM150BA6NC51 233 aa16.47■□□□□ 0.23
CTHRC1-201ENST00000330295 ZNF197O14709 1029 aa16.47■□□□□ 0.23
CTHRC1-201ENST00000330295 CYP3A4P08684 503 aa16.47■□□□□ 0.23
CTHRC1-201ENST00000330295 CCR2P41597 374 aa16.47■□□□□ 0.23
CTHRC1-201ENST00000330295 CLK2P49760 499 aaKnown RBP16.47■□□□□ 0.23
CTHRC1-201ENST00000330295 ANTXR2P58335 489 aa16.47■□□□□ 0.23
CTHRC1-201ENST00000330295 GRIK3Q13003 919 aa16.47■□□□□ 0.23
CTHRC1-201ENST00000330295 CASC1Q6TDU7 716 aa16.47■□□□□ 0.23
CTHRC1-201ENST00000330295 CCDC82Q8N4S0 544 aa16.47■□□□□ 0.23
CTHRC1-201ENST00000330295 CRYGNQ8WXF5 182 aa16.47■□□□□ 0.23
CTHRC1-201ENST00000330295 COL4A3BPQ9Y5P4 624 aa16.47■□□□□ 0.23
CTHRC1-201ENST00000330295 ZNF462Q96JM2 2506 aa16.46■□□□□ 0.23
CTHRC1-201ENST00000330295 HEPACAM2A8MVW5 462 aa16.46■□□□□ 0.23
CTHRC1-201ENST00000330295 PATE3B3GLJ2 98 aa16.46■□□□□ 0.23
CTHRC1-201ENST00000330295 DCLK1O15075 740 aa16.46■□□□□ 0.23
CTHRC1-201ENST00000330295 CHADO15335 359 aa16.46■□□□□ 0.23
CTHRC1-201ENST00000330295 MAFO75444 373 aaPredicted RBP16.46■□□□□ 0.23
CTHRC1-201ENST00000330295 LRG1P02750 347 aa16.46■□□□□ 0.23
CTHRC1-201ENST00000330295 SPIRE1Q08AE8 756 aa16.46■□□□□ 0.23
CTHRC1-201ENST00000330295 KARSQ15046 597 aaKnown RBP16.46■□□□□ 0.23
CTHRC1-201ENST00000330295 PPP1R18Q6NYC8 613 aa16.46■□□□□ 0.23
CTHRC1-201ENST00000330295 PDZD4Q76G19 769 aaPredicted RBP16.46■□□□□ 0.23
CTHRC1-201ENST00000330295 YAF2Q8IY57 180 aa16.46■□□□□ 0.23
CTHRC1-201ENST00000330295 CAMKK1Q8N5S9 505 aa16.46■□□□□ 0.23
CTHRC1-201ENST00000330295 NCOA7Q8NI08 942 aa16.46■□□□□ 0.23
CTHRC1-201ENST00000330295 ZSCAN18Q8TBC5 510 aaPredicted RBP16.46■□□□□ 0.23
CTHRC1-201ENST00000330295 RAXQ9Y2V3 346 aa16.46■□□□□ 0.23
CTHRC1-201ENST00000330295 KALRNO60229 2985 aa16.45■□□□□ 0.22
CTHRC1-201ENST00000330295 ABCA7Q8IZY2 2146 aa16.45■□□□□ 0.22
CTHRC1-201ENST00000330295 ARHGEF37A1IGU5 675 aa16.45■□□□□ 0.22
CTHRC1-201ENST00000330295 HAX1O00165 279 aa16.45■□□□□ 0.22
CTHRC1-201ENST00000330295 KIF4AO95239 1232 aa16.45■□□□□ 0.22
CTHRC1-201ENST00000330295 RXRAP19793 462 aa16.45■□□□□ 0.22
CTHRC1-201ENST00000330295 IRX4P78413 519 aa16.45■□□□□ 0.22
CTHRC1-201ENST00000330295 ELAVL2Q12926 359 aaKnown RBP16.45■□□□□ 0.22
CTHRC1-201ENST00000330295 XKR3Q5GH77 459 aa16.45■□□□□ 0.22
CTHRC1-201ENST00000330295 RAB44Q7Z6P3 723 aaPredicted RBP16.45■□□□□ 0.22
CTHRC1-201ENST00000330295 PIP4P1Q86T03 277 aa16.45■□□□□ 0.22
CTHRC1-201ENST00000330295 UBL7Q96S82 380 aaPredicted RBP16.45■□□□□ 0.22
CTHRC1-201ENST00000330295 MTRRQ9UBK8 725 aa16.45■□□□□ 0.22
CTHRC1-201ENST00000330295 DACH1Q9UI36 760 aa16.45■□□□□ 0.22
CTHRC1-201ENST00000330295 RAI2Q9Y5P3 530 aa16.45■□□□□ 0.22
CTHRC1-201ENST00000330295 CDY1Q9Y6F8 540 aa16.45■□□□□ 0.22
CTHRC1-201ENST00000330295 SHROOM3Q8TF72 1996 aa16.45■□□□□ 0.22
CTHRC1-201ENST00000330295 URB1O60287 2271 aaKnown RBP16.45■□□□□ 0.22
CTHRC1-201ENST00000330295 TK2O00142 265 aa16.44■□□□□ 0.22
CTHRC1-201ENST00000330295 MEFVO15553 781 aaPredicted RBP16.44■□□□□ 0.22
CTHRC1-201ENST00000330295 STBD1O95210 358 aa16.44■□□□□ 0.22
CTHRC1-201ENST00000330295 CYP21A2P08686 494 aa16.44■□□□□ 0.22
CTHRC1-201ENST00000330295 FCHO2Q0JRZ9 810 aa16.44■□□□□ 0.22
CTHRC1-201ENST00000330295 PRR16Q569H4 304 aa16.44■□□□□ 0.22
CTHRC1-201ENST00000330295 BMP2KLQ5H9B9 411 aa16.44■□□□□ 0.22
CTHRC1-201ENST00000330295 NOTUMQ6P988 496 aa16.44■□□□□ 0.22
CTHRC1-201ENST00000330295 ZNF605Q86T29 641 aa16.44■□□□□ 0.22
CTHRC1-201ENST00000330295 HACE1Q8IYU2 909 aa16.44■□□□□ 0.22
CTHRC1-201ENST00000330295 TTC8Q8TAM2 541 aa16.44■□□□□ 0.22
CTHRC1-201ENST00000330295 E2F7Q96AV8 911 aa16.44■□□□□ 0.22
CTHRC1-201ENST00000330295 CCDC51Q96ER9 411 aa16.44■□□□□ 0.22
CTHRC1-201ENST00000330295 NXF3Q9H4D5 531 aaKnown RBP16.44■□□□□ 0.22
CTHRC1-201ENST00000330295 ATG2BQ96BY7 2078 aa16.44■□□□□ 0.22
CTHRC1-201ENST00000330295 SPTA1P02549 2419 aa16.43■□□□□ 0.22
CTHRC1-201ENST00000330295 CCDC194A0A1B0GVG4 234 aa16.43■□□□□ 0.22
CTHRC1-201ENST00000330295 SMCO2A6NFE2 343 aa16.43■□□□□ 0.22
CTHRC1-201ENST00000330295 CHMP2AO43633 222 aa16.43■□□□□ 0.22
CTHRC1-201ENST00000330295 ATG13O75143 517 aa16.43■□□□□ 0.22
CTHRC1-201ENST00000330295 ERLIN2O94905 339 aa16.43■□□□□ 0.22
CTHRC1-201ENST00000330295 SRGAP2CP0DJJ0 459 aa16.43■□□□□ 0.22
CTHRC1-201ENST00000330295 AKAP5P24588 427 aa16.43■□□□□ 0.22
CTHRC1-201ENST00000330295 SFNP31947 248 aa16.43■□□□□ 0.22
CTHRC1-201ENST00000330295 GBP1P32455 592 aa16.43■□□□□ 0.22
CTHRC1-201ENST00000330295 JAK3P52333 1124 aa16.43■□□□□ 0.22
CTHRC1-201ENST00000330295 ZNF423Q2M1K9 1284 aa16.43■□□□□ 0.22
CTHRC1-201ENST00000330295 CYP4A22Q5TCH4 519 aa16.43■□□□□ 0.22
CTHRC1-201ENST00000330295 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.43■□□□□ 0.22
CTHRC1-201ENST00000330295 TMTC3Q6ZXV5 915 aa16.43■□□□□ 0.22
CTHRC1-201ENST00000330295 MDM1Q8TC05 714 aa16.43■□□□□ 0.22
CTHRC1-201ENST00000330295 SLC39A7Q92504 469 aa16.43■□□□□ 0.22
CTHRC1-201ENST00000330295 RSPRY1Q96DX4 576 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms