RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 SLC12A4Q9UP95 1085 aa21.19■□□□□ 0.98
CRLF3-201ENST00000324238 GRIN3BO60391 1043 aa21.19■□□□□ 0.98
CRLF3-201ENST00000324238 CYP1A2P05177 515 aa21.19■□□□□ 0.98
CRLF3-201ENST00000324238 RALAP11233 206 aa21.19■□□□□ 0.98
CRLF3-201ENST00000324238 CDR2Q01850 454 aa21.19■□□□□ 0.98
CRLF3-201ENST00000324238 TAOK1Q7L7X3 1001 aa21.19■□□□□ 0.98
CRLF3-201ENST00000324238 CNKSR1Q969H4 720 aa21.19■□□□□ 0.98
CRLF3-201ENST00000324238 HERC5Q9UII4 1024 aaKnown RBP21.19■□□□□ 0.98
CRLF3-201ENST00000324238 UBE4BO95155 1302 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 GSTTP1A0A1W2PQM5 241 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 ZSCAN5DPP0CG00 497 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 HSPA6P17066 643 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 PSMC4P43686 418 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 HADHBP55084 474 aaKnown RBP21.18■□□□□ 0.98
CRLF3-201ENST00000324238 TKFCQ3LXA3 575 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 GLIS1Q8NBF1 620 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 FAM213AQ9BRX8 229 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 MRIQ9BWK5 157 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 ANAPC5Q9UJX4 755 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 GTF3C4Q9UKN8 822 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 GZMAP12544 262 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 ELF1P32519 619 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 CAP2P40123 477 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 ALDH5A1P51649 535 aaPredicted RBP21.18■□□□□ 0.98
CRLF3-201ENST00000324238 NCALDP61601 193 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 MTMR1Q13613 665 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 KRT39Q6A163 491 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 RSBN1LQ6PCB5 846 aaPredicted RBP21.18■□□□□ 0.98
CRLF3-201ENST00000324238 FAM151AQ8WW52 585 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 DDX1Q92499 740 aaKnown RBP21.18■□□□□ 0.98
CRLF3-201ENST00000324238 FAM212AQ96EL1 285 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 WNK4Q96J92 1243 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 NT5C1BQ96P26 610 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 KIF9Q9HAQ2 790 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 RAB20Q9NX57 234 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 USP15Q9Y4E8 981 aaPredicted RBP21.18■□□□□ 0.98
CRLF3-201ENST00000324238 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.18■□□□□ 0.98
CRLF3-201ENST00000324238 EZRP15311 586 aaKnown RBP21.18■□□□□ 0.98
CRLF3-201ENST00000324238 IVDP26440 423 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 CYP1B1Q16678 543 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 FITM2Q8N6M3 262 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 HAUS1Q96CS2 278 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 C11orf70Q9BRQ4 267 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 HOMER3Q9NSC5 361 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 NINJ2Q9NZG7 142 aa21.18■□□□□ 0.98
CRLF3-201ENST00000324238 ASTN2O75129 1339 aaPredicted RBP21.17■□□□□ 0.98
CRLF3-201ENST00000324238 GHRP10912 638 aa21.17■□□□□ 0.98
CRLF3-201ENST00000324238 ETS1P14921 441 aa21.17■□□□□ 0.98
CRLF3-201ENST00000324238 NPTX2P47972 431 aa21.17■□□□□ 0.98
CRLF3-201ENST00000324238 WNT7BP56706 349 aa21.17■□□□□ 0.98
CRLF3-201ENST00000324238 SPDYCQ5MJ68 293 aa21.17■□□□□ 0.98
CRLF3-201ENST00000324238 AGAP11Q8TF27 550 aa21.17■□□□□ 0.98
CRLF3-201ENST00000324238 C7orf43Q8WVR3 580 aa21.17■□□□□ 0.98
CRLF3-201ENST00000324238 PPP1R1BQ9UD71 204 aaPredicted RBP21.17■□□□□ 0.98
CRLF3-201ENST00000324238 C10orf71Q711Q0 1435 aa21.17■□□□□ 0.98
CRLF3-201ENST00000324238 KRT16P08779 473 aa21.17■□□□□ 0.98
CRLF3-201ENST00000324238 KRT10P13645 584 aa21.17■□□□□ 0.98
CRLF3-201ENST00000324238 TCF4P15884 667 aa21.17■□□□□ 0.98
CRLF3-201ENST00000324238 TAS2R40P59535 323 aa21.17■□□□□ 0.98
CRLF3-201ENST00000324238 ACAD10Q6JQN1 1059 aa21.17■□□□□ 0.98
CRLF3-201ENST00000324238 TGS1Q96RS0 853 aaKnown RBP21.17■□□□□ 0.98
CRLF3-201ENST00000324238 LRRC19Q9H756 370 aa21.17■□□□□ 0.98
CRLF3-201ENST00000324238 A1CFQ9NQ94 594 aaKnown RBP21.17■□□□□ 0.98
CRLF3-201ENST00000324238 TBX20Q9UMR3 447 aa21.17■□□□□ 0.98
CRLF3-201ENST00000324238 TTC4O95801 387 aa21.16■□□□□ 0.98
CRLF3-201ENST00000324238 CCNE2O96020 404 aa21.16■□□□□ 0.98
CRLF3-201ENST00000324238 ATF2P15336 505 aa21.16■□□□□ 0.98
CRLF3-201ENST00000324238 RPS6P62753 249 aaKnown RBP21.16■□□□□ 0.98
CRLF3-201ENST00000324238 ITIH4Q14624 930 aa21.16■□□□□ 0.98
CRLF3-201ENST00000324238 TMED2Q15363 201 aa21.16■□□□□ 0.98
CRLF3-201ENST00000324238 WLSQ5T9L3 541 aa21.16■□□□□ 0.98
CRLF3-201ENST00000324238 SLC39A4Q6P5W5 647 aa21.16■□□□□ 0.98
CRLF3-201ENST00000324238 KCND2Q9NZV8 630 aa21.16■□□□□ 0.98
CRLF3-201ENST00000324238 NAALADL1Q9UQQ1 740 aa21.16■□□□□ 0.98
CRLF3-201ENST00000324238 CNTNAP1P78357 1384 aa21.16■□□□□ 0.98
CRLF3-201ENST00000324238 MROH7Q68CQ1 1323 aa21.16■□□□□ 0.98
CRLF3-201ENST00000324238 SKAP2O75563 359 aaPredicted RBP21.16■□□□□ 0.98
CRLF3-201ENST00000324238 STX2P32856 288 aa21.16■□□□□ 0.98
CRLF3-201ENST00000324238 GTF2BQ00403 316 aa21.16■□□□□ 0.98
CRLF3-201ENST00000324238 FBXL13Q8NEE6 735 aa21.16■□□□□ 0.98
CRLF3-201ENST00000324238 RIT2Q99578 217 aa21.16■□□□□ 0.98
CRLF3-201ENST00000324238 AGO4Q9HCK5 861 aaKnown RBP21.16■□□□□ 0.98
CRLF3-201ENST00000324238 CTDP1Q9Y5B0 961 aaPredicted RBP21.16■□□□□ 0.98
CRLF3-201ENST00000324238 FSCN2O14926 492 aa21.15■□□□□ 0.98
CRLF3-201ENST00000324238 RFX1P22670 979 aa21.15■□□□□ 0.98
CRLF3-201ENST00000324238 GBP2P32456 591 aaPredicted RBP21.15■□□□□ 0.98
CRLF3-201ENST00000324238 EN1Q05925 392 aaPredicted RBP21.15■□□□□ 0.98
CRLF3-201ENST00000324238 SEZ6Q53EL9 994 aa21.15■□□□□ 0.98
CRLF3-201ENST00000324238 TNFAIP8L3Q5GJ75 292 aa21.15■□□□□ 0.98
CRLF3-201ENST00000324238 CYFIP1Q7L576 1253 aa21.15■□□□□ 0.98
CRLF3-201ENST00000324238 GSTA5Q7RTV2 222 aa21.15■□□□□ 0.98
CRLF3-201ENST00000324238 KLHL29Q96CT2 875 aa21.15■□□□□ 0.98
CRLF3-201ENST00000324238 BICD1Q96G01 975 aa21.15■□□□□ 0.98
CRLF3-201ENST00000324238 NSRP1Q9H0G5 558 aaKnown RBP21.15■□□□□ 0.98
CRLF3-201ENST00000324238 ZNF536O15090 1300 aa21.15■□□□□ 0.98
CRLF3-201ENST00000324238 RNASELQ05823 741 aaKnown RBP21.15■□□□□ 0.98
CRLF3-201ENST00000324238 MGAT5Q09328 741 aa21.15■□□□□ 0.98
CRLF3-201ENST00000324238 TMEM161BQ8NDZ6 487 aa21.15■□□□□ 0.98
CRLF3-201ENST00000324238 SNF8Q96H20 258 aa21.15■□□□□ 0.98
CRLF3-201ENST00000324238 C10orf88Q9H8K7 445 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms