RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 ATF7IP2Q5U623 682 aa15.65■□□□□ 0.1
RPP40-201ENST00000319533 HAUS3Q68CZ6 603 aa15.65■□□□□ 0.1
RPP40-201ENST00000319533 RSPO2Q6UXX9 243 aaPredicted RBP15.65■□□□□ 0.1
RPP40-201ENST00000319533 C4orf32Q8N8J7 132 aa15.65■□□□□ 0.1
RPP40-201ENST00000319533 ST13P5Q8NFI4 369 aaPredicted RBP15.65■□□□□ 0.1
RPP40-201ENST00000319533 SLC7A14Q8TBB6 771 aa15.65■□□□□ 0.1
RPP40-201ENST00000319533 OSBPL6Q9BZF3 934 aa15.65■□□□□ 0.1
RPP40-201ENST00000319533 AVENQ9NQS1 362 aaPredicted RBP15.65■□□□□ 0.1
RPP40-201ENST00000319533 DNMT3BQ9UBC3 853 aaKnown RBP15.65■□□□□ 0.1
RPP40-201ENST00000319533 LIMCH1Q9UPQ0 1083 aa15.65■□□□□ 0.1
RPP40-201ENST00000319533 TNFSF13BQ9Y275 285 aa15.65■□□□□ 0.1
RPP40-201ENST00000319533 GDAQ9Y2T3 454 aa15.65■□□□□ 0.1
RPP40-201ENST00000319533 R4GN57 208 aa15.65■□□□□ 0.1
RPP40-201ENST00000319533 CACNA1IQ9P0X4 2223 aa15.64■□□□□ 0.09
RPP40-201ENST00000319533 KANSL1LA0AUZ9 987 aa15.64■□□□□ 0.09
RPP40-201ENST00000319533 B3GAT3O94766 335 aa15.64■□□□□ 0.09
RPP40-201ENST00000319533 TRAPPC10P48553 1259 aa15.64■□□□□ 0.09
RPP40-201ENST00000319533 CLCNKBP51801 687 aa15.64■□□□□ 0.09
RPP40-201ENST00000319533 GUCY1B3Q02153 619 aa15.64■□□□□ 0.09
RPP40-201ENST00000319533 SPECC1Q5M775 1068 aa15.64■□□□□ 0.09
RPP40-201ENST00000319533 ALKAL1Q6UXT8 129 aa15.64■□□□□ 0.09
RPP40-201ENST00000319533 ANKS3Q6ZW76 656 aa15.64■□□□□ 0.09
RPP40-201ENST00000319533 NPAS3Q8IXF0 933 aa15.64■□□□□ 0.09
RPP40-201ENST00000319533 MAML2Q8IZL2 1156 aaPredicted RBP15.64■□□□□ 0.09
RPP40-201ENST00000319533 IFT74Q96LB3 600 aa15.64■□□□□ 0.09
RPP40-201ENST00000319533 LLPHQ9BRT6 129 aaKnown RBP15.64■□□□□ 0.09
RPP40-201ENST00000319533 KIFC3Q9BVG8 833 aa15.64■□□□□ 0.09
RPP40-201ENST00000319533 FOXQ1Q9C009 403 aa15.64■□□□□ 0.09
RPP40-201ENST00000319533 PTPRHQ9HD43 1115 aa15.64■□□□□ 0.09
RPP40-201ENST00000319533 SMIM28A0A1B0GU29 152 aa15.63■□□□□ 0.09
RPP40-201ENST00000319533 TRAPPC3O43617 180 aa15.63■□□□□ 0.09
RPP40-201ENST00000319533 LIG1P18858 919 aa15.63■□□□□ 0.09
RPP40-201ENST00000319533 GRM5P41594 1212 aa15.63■□□□□ 0.09
RPP40-201ENST00000319533 PFKPQ01813 784 aa15.63■□□□□ 0.09
RPP40-201ENST00000319533 SNW1Q13573 536 aaKnown RBP15.63■□□□□ 0.09
RPP40-201ENST00000319533 PDIA5Q14554 519 aa15.63■□□□□ 0.09
RPP40-201ENST00000319533 MLF2Q15773 248 aaPredicted RBP15.63■□□□□ 0.09
RPP40-201ENST00000319533 PABPC1LQ4VXU2 614 aaKnown RBP15.63■□□□□ 0.09
RPP40-201ENST00000319533 SLC44A4Q53GD3 710 aa15.63■□□□□ 0.09
RPP40-201ENST00000319533 GLRA4Q5JXX5 417 aa15.63■□□□□ 0.09
RPP40-201ENST00000319533 TTC38Q5R3I4 469 aa15.63■□□□□ 0.09
RPP40-201ENST00000319533 SLC8B1Q6J4K2 584 aa15.63■□□□□ 0.09
RPP40-201ENST00000319533 ZC3H14Q6PJT7 736 aaKnown RBP15.63■□□□□ 0.09
RPP40-201ENST00000319533 APBB1IPQ7Z5R6 666 aaPredicted RBP15.63■□□□□ 0.09
RPP40-201ENST00000319533 C3orf58Q8NDZ4 430 aa15.63■□□□□ 0.09
RPP40-201ENST00000319533 FBXO18Q8NFZ0 1043 aa15.63■□□□□ 0.09
RPP40-201ENST00000319533 DDX27Q96GQ7 796 aaKnown RBP15.63■□□□□ 0.09
RPP40-201ENST00000319533 BORCS6Q96GS4 357 aa15.63■□□□□ 0.09
RPP40-201ENST00000319533 C8orf76Q96K31 380 aa15.63■□□□□ 0.09
RPP40-201ENST00000319533 BHMT2Q9H2M3 363 aa15.63■□□□□ 0.09
RPP40-201ENST00000319533 HCFC1R1Q9NWW0 138 aa15.63■□□□□ 0.09
RPP40-201ENST00000319533 CDY1Q9Y6F8 540 aa15.63■□□□□ 0.09
RPP40-201ENST00000319533 DMXL1Q9Y485 3027 aa15.62■□□□□ 0.09
RPP40-201ENST00000319533 TRIP11Q15643 1979 aa15.62■□□□□ 0.09
RPP40-201ENST00000319533 DNAH14Q0VDD8 3507 aa15.62■□□□□ 0.09
RPP40-201ENST00000319533 ARHGEF37A1IGU5 675 aa15.62■□□□□ 0.09
RPP40-201ENST00000319533 K7ERI5 159 aa15.62■□□□□ 0.09
RPP40-201ENST00000319533 TBC1D4O60343 1298 aa15.62■□□□□ 0.09
RPP40-201ENST00000319533 LRRN2O75325 713 aa15.62■□□□□ 0.09
RPP40-201ENST00000319533 ECI2O75521 394 aa15.62■□□□□ 0.09
RPP40-201ENST00000319533 ABLIM3O94929 683 aa15.62■□□□□ 0.09
RPP40-201ENST00000319533 TKTP29401 623 aaKnown RBP15.62■□□□□ 0.09
RPP40-201ENST00000319533 CCT6AP40227 531 aaKnown RBP15.62■□□□□ 0.09
RPP40-201ENST00000319533 ZNF528Q3MIS6 628 aa15.62■□□□□ 0.09
RPP40-201ENST00000319533 IGSF22Q8N9C0 903 aa15.62■□□□□ 0.09
RPP40-201ENST00000319533 KCNG4Q8TDN1 519 aa15.62■□□□□ 0.09
RPP40-201ENST00000319533 ACO2Q99798 780 aaKnown RBP15.62■□□□□ 0.09
RPP40-201ENST00000319533 CDT1Q9H211 546 aa15.62■□□□□ 0.09
RPP40-201ENST00000319533 TMEM134Q9H6X4 195 aa15.62■□□□□ 0.09
RPP40-201ENST00000319533 GOLGA2P5Q9HBQ8 144 aa15.62■□□□□ 0.09
RPP40-201ENST00000319533 POLD4Q9HCU8 107 aa15.62■□□□□ 0.09
RPP40-201ENST00000319533 GDE1Q9NZC3 331 aa15.62■□□□□ 0.09
RPP40-201ENST00000319533 FBXO4Q9UKT5 387 aa15.62■□□□□ 0.09
RPP40-201ENST00000319533 POLIQ9UNA4 740 aa15.62■□□□□ 0.09
RPP40-201ENST00000319533 STK24Q9Y6E0 443 aa15.62■□□□□ 0.09
RPP40-201ENST00000319533 PHLPP2Q6ZVD8 1323 aa15.62■□□□□ 0.09
RPP40-201ENST00000319533 FRYLO94915 3013 aa15.62■□□□□ 0.09
RPP40-201ENST00000319533 MIA3Q5JRA6 1907 aa15.61■□□□□ 0.09
RPP40-201ENST00000319533 KCNE1P15382 129 aa15.61■□□□□ 0.09
RPP40-201ENST00000319533 MAGEA9P43362 315 aa15.61■□□□□ 0.09
RPP40-201ENST00000319533 BRCC3P46736 316 aa15.61■□□□□ 0.09
RPP40-201ENST00000319533 SOX4Q06945 474 aaPredicted RBP15.61■□□□□ 0.09
RPP40-201ENST00000319533 RABEP1Q15276 862 aa15.61■□□□□ 0.09
RPP40-201ENST00000319533 POTEHQ6S545 545 aa15.61■□□□□ 0.09
RPP40-201ENST00000319533 DAW1Q8N136 415 aa15.61■□□□□ 0.09
RPP40-201ENST00000319533 CEP120Q8N960 986 aa15.61■□□□□ 0.09
RPP40-201ENST00000319533 SUMF1Q8NBK3 374 aa15.61■□□□□ 0.09
RPP40-201ENST00000319533 ZNF461Q8TAF7 563 aa15.61■□□□□ 0.09
RPP40-201ENST00000319533 ZSCAN31Q96LW9 406 aaPredicted RBP15.61■□□□□ 0.09
RPP40-201ENST00000319533 KIF2CQ99661 725 aa15.61■□□□□ 0.09
RPP40-201ENST00000319533 CCDC94Q9BW85 323 aaPredicted RBP15.61■□□□□ 0.09
RPP40-201ENST00000319533 SH2B1Q9NRF2 756 aaPredicted RBP15.61■□□□□ 0.09
RPP40-201ENST00000319533 TOPORSQ9NS56 1045 aaPredicted RBP15.61■□□□□ 0.09
RPP40-201ENST00000319533 ARHGAP28Q9P2N2 729 aa15.61■□□□□ 0.09
RPP40-201ENST00000319533 LRWD1Q9UFC0 647 aa15.61■□□□□ 0.09
RPP40-201ENST00000319533 KIAA1024Q9UPX6 916 aa15.61■□□□□ 0.09
RPP40-201ENST00000319533 MRPS23Q9Y3D9 190 aaKnown RBP15.61■□□□□ 0.09
RPP40-201ENST00000319533 COL4A3Q01955 1670 aa15.6■□□□□ 0.09
RPP40-201ENST00000319533 GPR179Q6PRD1 2367 aa15.6■□□□□ 0.09
RPP40-201ENST00000319533 I3L4J1 428 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms