RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 SLC44A5Q8NCS7 719 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 SHC3Q92529 594 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 FNBP1Q96RU3 617 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 DCLK3Q9C098 648 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 KIAA1683Q9H0B3 1180 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 CPVLQ9H3G5 476 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 AGPAT3Q9NRZ7 376 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 ATXN10Q9UBB4 475 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 PTPN22Q9Y2R2 807 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 RNF8O76064 485 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 FOXN2P32314 431 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 ZNF76P36508 570 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 CASP4P49662 377 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 LGSNQ5TDP6 509 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 POTEGQ6S5H5 508 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 RHOT1Q8IXI2 618 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 XXYLT1Q8NBI6 393 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 SH3RF3Q8TEJ3 882 aaPredicted RBP5.07□□□□□ -1.6
PTPN13-201ENST00000316707 EPAS1Q99814 870 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 NUP85Q9BW27 656 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 MRPL47Q9HD33 250 aaKnown RBP5.07□□□□□ -1.6
PTPN13-201ENST00000316707 AAASQ9NRG9 546 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 POLIQ9UNA4 740 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 SCINQ9Y6U3 715 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 ARFGEF2Q9Y6D5 1785 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 SPAG6O75602 509 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 KCNJ1P48048 391 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 CDK7P50613 346 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 SF3A3Q12874 501 aaKnown RBP eCLIP5.07□□□□□ -1.6
PTPN13-201ENST00000316707 LIN52Q52LA3 116 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 ODR4Q5SWX8 454 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 RBM26Q5T8P6 1007 aaKnown RBP5.07□□□□□ -1.6
PTPN13-201ENST00000316707 OR52E8Q6IFG1 317 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 ZNF720Q7Z2F6 126 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 ATP11CQ8NB49 1132 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 FGFBP2Q9BYJ0 223 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 IQCGQ9H095 443 aaKnown RBP5.07□□□□□ -1.6
PTPN13-201ENST00000316707 VPS37BQ9H9H4 285 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 THEGQ9P2T0 379 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 IKBKGQ9Y6K9 419 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 LOC102724428A0A0B4J2F2 783 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 ATP9AO75110 1047 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 CSDE1O75534 798 aaKnown RBP5.07□□□□□ -1.6
PTPN13-201ENST00000316707 CYP3A4P08684 503 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 TARSP26639 723 aaKnown RBP5.07□□□□□ -1.6
PTPN13-201ENST00000316707 MAPK4P31152 587 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 SIK1P57059 783 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 PRR16Q569H4 304 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 LRRC38Q5VT99 294 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 LRRC74BQ6ZQY2 392 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 FAM71AQ8IYT1 594 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 CCDC110Q8TBZ0 833 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 GATA6Q92908 595 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 NT5C1BQ96P26 610 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 CYTH2Q99418 400 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 NDNQ99608 321 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 MLXIPLQ9NP71 852 aa5.07□□□□□ -1.6
PTPN13-201ENST00000316707 DDX43Q9NXZ2 648 aaKnown RBP5.07□□□□□ -1.6
PTPN13-201ENST00000316707 C5P01031 1676 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 EME2A4GXA9 379 aaPredicted RBP5.06□□□□□ -1.6
PTPN13-201ENST00000316707 EML1O00423 815 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 CLDN3O15551 220 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 PSTPIP1O43586 416 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 ZC3H11AO75152 810 aaKnown RBP eCLIP5.06□□□□□ -1.6
PTPN13-201ENST00000316707 DESP17661 470 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 RFC5P40937 340 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 NSFP46459 744 aaKnown RBP5.06□□□□□ -1.6
PTPN13-201ENST00000316707 AP2B1P63010 937 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 ENPEPQ07075 957 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 RCN1Q15293 331 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 ECM1Q16610 540 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 NOP9Q86U38 636 aaKnown RBP5.06□□□□□ -1.6
PTPN13-201ENST00000316707 EPS8L1Q8TE68 723 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 C10orf82Q8WW14 230 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 C9orf72Q96LT7 481 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 FRMD8Q9BZ67 464 aaPredicted RBP5.06□□□□□ -1.6
PTPN13-201ENST00000316707 FRMD8P1Q9BZ68 369 aaPredicted RBP5.06□□□□□ -1.6
PTPN13-201ENST00000316707 WWP1Q9H0M0 922 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 Q9H521 79 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 GPCPD1Q9NPB8 672 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 UBE2TQ9NPD8 197 aaPredicted RBP5.06□□□□□ -1.6
PTPN13-201ENST00000316707 NKX1-2Q9UD57 310 aaPredicted RBP5.06□□□□□ -1.6
PTPN13-201ENST00000316707 KCNG1Q9UIX4 513 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 DRG1Q9Y295 367 aaKnown RBP5.06□□□□□ -1.6
PTPN13-201ENST00000316707 TMEM110-MUSTN1A8MSY1 372 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 CAPN9O14815 690 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 KLF11O14901 512 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 CLIC2O15247 247 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 LRRN2O75325 713 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 RGS2P41220 211 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 INHBEP58166 350 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 MORF4L2Q15014 288 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 SIX1Q15475 284 aaPredicted RBP5.06□□□□□ -1.6
PTPN13-201ENST00000316707 EFHC2Q5JST6 749 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 MARK2Q7KZI7 788 aaKnown RBP5.06□□□□□ -1.6
PTPN13-201ENST00000316707 CHSY1Q86X52 802 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 OGFOD1Q8N543 542 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 OLIG1Q8TAK6 271 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 DCAF4Q8WV16 495 aa5.06□□□□□ -1.6
PTPN13-201ENST00000316707 IRGQQ8WZA9 623 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms